Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm15195-201ENSMUST00000118775 263 ntBASIC8.64□□□□□ -1.03
Trim41Q5NCC3 Gm11600-201ENSMUST00000119592 240 ntBASIC8.64□□□□□ -1.03
Trim41Q5NCC3 Gm5123-201ENSMUST00000121905 837 ntBASIC8.64□□□□□ -1.03
Trim41Q5NCC3 Gm5755-201ENSMUST00000152394 837 ntBASIC8.64□□□□□ -1.03
Trim41Q5NCC3 Gm24348-201ENSMUST00000158710 130 ntBASIC8.64□□□□□ -1.03
Trim41Q5NCC3 Gm21860-201ENSMUST00000177893 309 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Trim41Q5NCC3 Gm21748-201ENSMUST00000179623 309 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Trim41Q5NCC3 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trim41Q5NCC3 AC152979.1-201ENSMUST00000218214 289 ntBASIC8.64□□□□□ -1.03
Trim41Q5NCC3 AC155712.1-201ENSMUST00000219704 160 ntBASIC8.64□□□□□ -1.03
Trim41Q5NCC3 AC154733.1-201ENSMUST00000221126 679 ntTSL 5 BASIC8.64□□□□□ -1.03
Trim41Q5NCC3 AC130821.1-201ENSMUST00000221997 293 ntBASIC8.64□□□□□ -1.03
Trim41Q5NCC3 Olfr1467-201ENSMUST00000054687 927 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Trim41Q5NCC3 Gm44250-201ENSMUST00000203092 4229 ntBASIC8.64□□□□□ -1.03
Trim41Q5NCC3 Gm43462-201ENSMUST00000200265 3648 ntBASIC8.64□□□□□ -1.03
Trim41Q5NCC3 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
Trim41Q5NCC3 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
Trim41Q5NCC3 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trim41Q5NCC3 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
Trim41Q5NCC3 Platr25-202ENSMUST00000220733 2859 ntAPPRIS P5 TSL 5 BASIC8.63□□□□□ -1.03
Trim41Q5NCC3 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Trim41Q5NCC3 Gm37357-201ENSMUST00000192386 3123 ntBASIC8.63□□□□□ -1.03
Trim41Q5NCC3 Olfr107-204ENSMUST00000215974 2282 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Trim41Q5NCC3 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trim41Q5NCC3 Gm14221-201ENSMUST00000109473 340 ntTSL 3 BASIC8.63□□□□□ -1.03
Trim41Q5NCC3 Gm22343-201ENSMUST00000122648 286 ntBASIC8.63□□□□□ -1.03
Trim41Q5NCC3 Gm17052-201ENSMUST00000165496 289 ntBASIC8.63□□□□□ -1.03
Trim41Q5NCC3 Gm20428-201ENSMUST00000174365 283 ntBASIC8.63□□□□□ -1.03
Trim41Q5NCC3 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Trim41Q5NCC3 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC8.63□□□□□ -1.03
Trim41Q5NCC3 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Trim41Q5NCC3 Gm27624-201ENSMUST00000185047 177 ntBASIC8.63□□□□□ -1.03
Trim41Q5NCC3 Gm43402-201ENSMUST00000197159 159 ntBASIC8.63□□□□□ -1.03
Trim41Q5NCC3 Gm44533-201ENSMUST00000207782 268 ntBASIC8.63□□□□□ -1.03
Trim41Q5NCC3 Gm19126-201ENSMUST00000207896 509 ntBASIC8.63□□□□□ -1.03
Trim41Q5NCC3 Gm23464-201ENSMUST00000083145 147 ntBASIC8.63□□□□□ -1.03
Trim41Q5NCC3 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trim41Q5NCC3 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Trim41Q5NCC3 Gm44789-201ENSMUST00000207195 3101 ntBASIC8.63□□□□□ -1.03
Trim41Q5NCC3 Slco1a1-202ENSMUST00000168119 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trim41Q5NCC3 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Trim41Q5NCC3 Olfr97-205ENSMUST00000214848 1861 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Trim41Q5NCC3 Olfr536-201ENSMUST00000064392 3853 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trim41Q5NCC3 Gm26300-201ENSMUST00000102282 94 ntBASIC8.62□□□□□ -1.03
Trim41Q5NCC3 Gm25169-201ENSMUST00000104190 129 ntBASIC8.62□□□□□ -1.03
Trim41Q5NCC3 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trim41Q5NCC3 Gm25720-201ENSMUST00000157503 105 ntBASIC8.62□□□□□ -1.03
Trim41Q5NCC3 Gm1992-201ENSMUST00000161581 250 ntTSL 3 BASIC8.62□□□□□ -1.03
Trim41Q5NCC3 Gm38011-201ENSMUST00000193312 279 ntBASIC8.62□□□□□ -1.03
Trim41Q5NCC3 Gm43814-201ENSMUST00000197851 413 ntBASIC8.62□□□□□ -1.03
Trim41Q5NCC3 Gm43427-201ENSMUST00000198188 331 ntBASIC8.62□□□□□ -1.03
Trim41Q5NCC3 Gm45367-201ENSMUST00000210171 347 ntBASIC8.62□□□□□ -1.03
Trim41Q5NCC3 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC8.62□□□□□ -1.03
Trim41Q5NCC3 AC124739.2-201ENSMUST00000222201 109 ntBASIC8.62□□□□□ -1.03
Trim41Q5NCC3 Mme-205ENSMUST00000194134 8039 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trim41Q5NCC3 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC8.62□□□□□ -1.03
Trim41Q5NCC3 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Trim41Q5NCC3 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Trim41Q5NCC3 Olfr1217-202ENSMUST00000213669 3839 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Trim41Q5NCC3 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
Trim41Q5NCC3 Gm36298-201ENSMUST00000223394 1732 ntBASIC8.61□□□□□ -1.03
Trim41Q5NCC3 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC8.61□□□□□ -1.03
Trim41Q5NCC3 Gm22311-201ENSMUST00000158006 110 ntBASIC8.61□□□□□ -1.03
Trim41Q5NCC3 Gm19123-201ENSMUST00000190716 651 ntBASIC8.61□□□□□ -1.03
Trim41Q5NCC3 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC8.61□□□□□ -1.03
Trim41Q5NCC3 Gm37997-201ENSMUST00000193515 267 ntBASIC8.61□□□□□ -1.03
Trim41Q5NCC3 Gm34073-201ENSMUST00000195736 212 ntBASIC8.61□□□□□ -1.03
Trim41Q5NCC3 AL590503.1-201ENSMUST00000222053 321 ntBASIC8.61□□□□□ -1.03
Trim41Q5NCC3 Olfr346-201ENSMUST00000078854 930 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Trim41Q5NCC3 Gm24817-201ENSMUST00000093672 105 ntBASIC8.61□□□□□ -1.03
Trim41Q5NCC3 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC8.61□□□□□ -1.03
Trim41Q5NCC3 Olfr1268-ps1-201ENSMUST00000117787 2501 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Trim41Q5NCC3 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC8.61□□□□□ -1.03
Trim41Q5NCC3 Xpo7-202ENSMUST00000167242 15121 ntAPPRIS ALT1 TSL 5 BASIC8.61□□□□□ -1.03
Trim41Q5NCC3 BC018473-204ENSMUST00000156293 4753 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Trim41Q5NCC3 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
Trim41Q5NCC3 Zc4h2-203ENSMUST00000120620 2156 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Trim41Q5NCC3 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC8.61□□□□□ -1.03
Trim41Q5NCC3 Zfp442-201ENSMUST00000109916 2922 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Trim41Q5NCC3 Olfr364-ps1-202ENSMUST00000214905 1914 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Trim41Q5NCC3 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Trim41Q5NCC3 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC8.6□□□□□ -1.03
Trim41Q5NCC3 Cd226-201ENSMUST00000037142 2357 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Trim41Q5NCC3 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Trim41Q5NCC3 Gm15752-201ENSMUST00000117427 394 ntBASIC8.6□□□□□ -1.03
Trim41Q5NCC3 Gm13172-201ENSMUST00000118685 256 ntBASIC8.6□□□□□ -1.03
Trim41Q5NCC3 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Trim41Q5NCC3 Gm28020-201ENSMUST00000157739 67 ntBASIC8.6□□□□□ -1.03
Trim41Q5NCC3 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Trim41Q5NCC3 Gm16378-201ENSMUST00000179168 342 ntBASIC8.6□□□□□ -1.03
Trim41Q5NCC3 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC8.6□□□□□ -1.03
Trim41Q5NCC3 Gm37123-201ENSMUST00000192994 1171 ntBASIC8.6□□□□□ -1.03
Trim41Q5NCC3 Gm5552-201ENSMUST00000197149 515 ntBASIC8.6□□□□□ -1.03
Trim41Q5NCC3 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC8.6□□□□□ -1.03
Trim41Q5NCC3 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC8.6□□□□□ -1.03
Trim41Q5NCC3 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Trim41Q5NCC3 Gm5265-201ENSMUST00000076828 342 ntBASIC8.6□□□□□ -1.03
Trim41Q5NCC3 Gm22297-201ENSMUST00000083312 106 ntBASIC8.6□□□□□ -1.03
Trim41Q5NCC3 Mir452-201ENSMUST00000093629 85 ntBASIC8.6□□□□□ -1.03
Trim41Q5NCC3 Tsga10-203ENSMUST00000114902 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 113.7 ms