Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
Trim40Q3UWA4 Gm28010-201ENSMUST00000179485 126 ntBASIC3.13□□□□□ -1.91
Trim40Q3UWA4 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC3.13□□□□□ -1.91
Trim40Q3UWA4 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC3.13□□□□□ -1.91
Trim40Q3UWA4 Gm27189-201ENSMUST00000184119 190 ntBASIC3.13□□□□□ -1.91
Trim40Q3UWA4 Gm8676-201ENSMUST00000184206 637 ntBASIC3.13□□□□□ -1.91
Trim40Q3UWA4 Gm29045-201ENSMUST00000187278 698 ntBASIC3.13□□□□□ -1.91
Trim40Q3UWA4 Gm29408-201ENSMUST00000187536 216 ntBASIC3.13□□□□□ -1.91
Trim40Q3UWA4 Gm6445-201ENSMUST00000189515 1112 ntBASIC3.13□□□□□ -1.91
Trim40Q3UWA4 Gm37239-201ENSMUST00000193510 141 ntBASIC3.13□□□□□ -1.91
Trim40Q3UWA4 Gm37576-201ENSMUST00000194228 372 ntBASIC3.13□□□□□ -1.91
Trim40Q3UWA4 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC3.13□□□□□ -1.91
Trim40Q3UWA4 Gm37523-201ENSMUST00000194901 412 ntBASIC3.13□□□□□ -1.91
Trim40Q3UWA4 Gm17951-201ENSMUST00000198536 496 ntBASIC3.13□□□□□ -1.91
Trim40Q3UWA4 Gm44125-201ENSMUST00000203068 448 ntBASIC3.13□□□□□ -1.91
Trim40Q3UWA4 Gm17838-201ENSMUST00000205872 876 ntBASIC3.13□□□□□ -1.91
Trim40Q3UWA4 Gm18597-201ENSMUST00000209519 694 ntBASIC3.13□□□□□ -1.91
Trim40Q3UWA4 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
Trim40Q3UWA4 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC3.13□□□□□ -1.91
Trim40Q3UWA4 1700042O05Rik-201ENSMUST00000219017 584 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Trim40Q3UWA4 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC3.13□□□□□ -1.91
Trim40Q3UWA4 AC122924.2-201ENSMUST00000220799 298 ntBASIC3.13□□□□□ -1.91
Trim40Q3UWA4 AC121966.1-201ENSMUST00000221458 282 ntBASIC3.13□□□□□ -1.91
Trim40Q3UWA4 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Trim40Q3UWA4 Olfr891-201ENSMUST00000062535 951 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Trim40Q3UWA4 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Trim40Q3UWA4 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
Trim40Q3UWA4 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Trim40Q3UWA4 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Trim40Q3UWA4 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trim40Q3UWA4 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trim40Q3UWA4 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Trim40Q3UWA4 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC3.12□□□□□ -1.91
Trim40Q3UWA4 Gm37788-201ENSMUST00000193958 2705 ntBASIC3.12□□□□□ -1.91
Trim40Q3UWA4 Olfr849-202ENSMUST00000217273 6140 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Trim40Q3UWA4 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trim40Q3UWA4 Gm24671-201ENSMUST00000104159 158 ntBASIC3.12□□□□□ -1.91
Trim40Q3UWA4 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Trim40Q3UWA4 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Trim40Q3UWA4 Gm12393-201ENSMUST00000117084 848 ntBASIC3.12□□□□□ -1.91
Trim40Q3UWA4 Gm14753-201ENSMUST00000118503 246 ntBASIC3.12□□□□□ -1.91
Trim40Q3UWA4 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC3.12□□□□□ -1.91
Trim40Q3UWA4 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC3.12□□□□□ -1.91
Trim40Q3UWA4 Gm25605-201ENSMUST00000158364 124 ntBASIC3.12□□□□□ -1.91
Trim40Q3UWA4 Gm22769-201ENSMUST00000158367 98 ntBASIC3.12□□□□□ -1.91
Trim40Q3UWA4 Gm26173-201ENSMUST00000158416 136 ntBASIC3.12□□□□□ -1.91
Trim40Q3UWA4 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Trim40Q3UWA4 Gm24819-201ENSMUST00000175094 166 ntBASIC3.12□□□□□ -1.91
Trim40Q3UWA4 Gm26219-201ENSMUST00000175216 71 ntBASIC3.12□□□□□ -1.91
Trim40Q3UWA4 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Trim40Q3UWA4 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
Trim40Q3UWA4 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC3.12□□□□□ -1.91
Trim40Q3UWA4 Gm8649-201ENSMUST00000181799 233 ntBASIC3.12□□□□□ -1.91
Trim40Q3UWA4 Gm29600-201ENSMUST00000188687 377 ntBASIC3.12□□□□□ -1.91
Trim40Q3UWA4 Gm19774-201ENSMUST00000190667 114 ntBASIC3.12□□□□□ -1.91
Trim40Q3UWA4 Gm37701-201ENSMUST00000192947 1100 ntBASIC3.12□□□□□ -1.91
Trim40Q3UWA4 Gm17771-201ENSMUST00000194477 1147 ntBASIC3.12□□□□□ -1.91
Trim40Q3UWA4 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Trim40Q3UWA4 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Trim40Q3UWA4 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC3.12□□□□□ -1.91
Trim40Q3UWA4 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Trim40Q3UWA4 AC144733.1-201ENSMUST00000222893 1289 ntBASIC3.12□□□□□ -1.91
Trim40Q3UWA4 Gm10237-201ENSMUST00000078393 273 ntBASIC3.12□□□□□ -1.91
Trim40Q3UWA4 Gm23733-201ENSMUST00000083750 106 ntBASIC3.12□□□□□ -1.91
Trim40Q3UWA4 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Trim40Q3UWA4 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Trim40Q3UWA4 Gm15697-201ENSMUST00000121946 2902 ntBASIC3.12□□□□□ -1.91
Trim40Q3UWA4 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trim40Q3UWA4 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Trim40Q3UWA4 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
Trim40Q3UWA4 Olfr970-202ENSMUST00000213975 1630 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Trim40Q3UWA4 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
Trim40Q3UWA4 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
Trim40Q3UWA4 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC3.11□□□□□ -1.91
Trim40Q3UWA4 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
Trim40Q3UWA4 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Trim40Q3UWA4 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Trim40Q3UWA4 Gm23273-201ENSMUST00000104058 135 ntBASIC3.11□□□□□ -1.91
Trim40Q3UWA4 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Trim40Q3UWA4 Gm13454-201ENSMUST00000118166 483 ntBASIC3.11□□□□□ -1.91
Trim40Q3UWA4 Gm12102-201ENSMUST00000118251 604 ntBASIC3.11□□□□□ -1.91
Trim40Q3UWA4 Gm14469-201ENSMUST00000118363 202 ntBASIC3.11□□□□□ -1.91
Trim40Q3UWA4 Gm9308-201ENSMUST00000119073 448 ntBASIC3.11□□□□□ -1.91
Trim40Q3UWA4 Gm11429-201ENSMUST00000119089 144 ntBASIC3.11□□□□□ -1.91
Trim40Q3UWA4 Gm15026-201ENSMUST00000119219 458 ntBASIC3.11□□□□□ -1.91
Trim40Q3UWA4 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC3.11□□□□□ -1.91
Trim40Q3UWA4 Gm14128-201ENSMUST00000119514 1011 ntBASIC3.11□□□□□ -1.91
Trim40Q3UWA4 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC3.11□□□□□ -1.91
Trim40Q3UWA4 Gm11991-201ENSMUST00000119652 1074 ntBASIC3.11□□□□□ -1.91
Trim40Q3UWA4 Gm14360-201ENSMUST00000120670 393 ntBASIC3.11□□□□□ -1.91
Trim40Q3UWA4 Gm15014-201ENSMUST00000120742 258 ntBASIC3.11□□□□□ -1.91
Trim40Q3UWA4 Gm14915-201ENSMUST00000120747 204 ntBASIC3.11□□□□□ -1.91
Trim40Q3UWA4 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Trim40Q3UWA4 Gm26276-201ENSMUST00000157099 109 ntBASIC3.11□□□□□ -1.91
Trim40Q3UWA4 Gm24914-201ENSMUST00000157285 313 ntBASIC3.11□□□□□ -1.91
Trim40Q3UWA4 Gm23025-201ENSMUST00000158769 111 ntBASIC3.11□□□□□ -1.91
Trim40Q3UWA4 Gm23473-201ENSMUST00000158883 116 ntBASIC3.11□□□□□ -1.91
Trim40Q3UWA4 Gm26177-201ENSMUST00000178683 107 ntBASIC3.11□□□□□ -1.91
Trim40Q3UWA4 Gm24968-201ENSMUST00000179817 107 ntBASIC3.11□□□□□ -1.91
Trim40Q3UWA4 Mir7031-201ENSMUST00000183860 65 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms