Protein–RNA interactions for Protein: Q3U4B1

Ssbp4, Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4Q3U4B1 Gm26476-201ENSMUST00000122618 313 ntBASIC3.16□□□□□ -1.9
Ssbp4Q3U4B1 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC3.16□□□□□ -1.9
Ssbp4Q3U4B1 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC3.16□□□□□ -1.9
Ssbp4Q3U4B1 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC3.16□□□□□ -1.9
Ssbp4Q3U4B1 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC3.16□□□□□ -1.9
Ssbp4Q3U4B1 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC3.16□□□□□ -1.9
Ssbp4Q3U4B1 Gm20542-201ENSMUST00000174582 372 ntBASIC3.16□□□□□ -1.9
Ssbp4Q3U4B1 Mir3070b-201ENSMUST00000175205 89 ntBASIC3.16□□□□□ -1.9
Ssbp4Q3U4B1 Gm27957-201ENSMUST00000184054 127 ntBASIC3.16□□□□□ -1.9
Ssbp4Q3U4B1 Mir496b-201ENSMUST00000184935 113 ntBASIC3.16□□□□□ -1.9
Ssbp4Q3U4B1 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC3.16□□□□□ -1.9
Ssbp4Q3U4B1 Gm37431-201ENSMUST00000195102 111 ntBASIC3.16□□□□□ -1.9
Ssbp4Q3U4B1 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC3.16□□□□□ -1.9
Ssbp4Q3U4B1 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC3.16□□□□□ -1.9
Ssbp4Q3U4B1 Gm19243-201ENSMUST00000198592 269 ntBASIC3.16□□□□□ -1.9
Ssbp4Q3U4B1 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC3.16□□□□□ -1.9
Ssbp4Q3U4B1 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Ssbp4Q3U4B1 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC3.16□□□□□ -1.9
Ssbp4Q3U4B1 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC3.16□□□□□ -1.9
Ssbp4Q3U4B1 Gm45245-201ENSMUST00000210082 376 ntBASIC3.16□□□□□ -1.9
Ssbp4Q3U4B1 Gm18194-201ENSMUST00000210455 481 ntBASIC3.16□□□□□ -1.9
Ssbp4Q3U4B1 Gm8423-201ENSMUST00000211387 607 ntBASIC3.16□□□□□ -1.9
Ssbp4Q3U4B1 Gm45439-201ENSMUST00000211723 359 ntBASIC3.16□□□□□ -1.9
Ssbp4Q3U4B1 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC3.16□□□□□ -1.9
Ssbp4Q3U4B1 AC145736.1-201ENSMUST00000214661 479 ntBASIC3.16□□□□□ -1.9
Ssbp4Q3U4B1 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC3.16□□□□□ -1.9
Ssbp4Q3U4B1 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Ssbp4Q3U4B1 Gm30155-201ENSMUST00000223458 339 ntBASIC3.16□□□□□ -1.9
Ssbp4Q3U4B1 CT485608.1-201ENSMUST00000228759 389 ntBASIC3.16□□□□□ -1.9
Ssbp4Q3U4B1 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Ssbp4Q3U4B1 Gm22293-201ENSMUST00000083314 109 ntBASIC3.16□□□□□ -1.9
Ssbp4Q3U4B1 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Ssbp4Q3U4B1 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC3.16□□□□□ -1.9
Ssbp4Q3U4B1 Gm37777-201ENSMUST00000195546 3366 ntBASIC3.16□□□□□ -1.9
Ssbp4Q3U4B1 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Ssbp4Q3U4B1 Gm37298-201ENSMUST00000193770 3868 ntBASIC3.16□□□□□ -1.9
Ssbp4Q3U4B1 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Ssbp4Q3U4B1 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Ssbp4Q3U4B1 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC3.15□□□□□ -1.91
Ssbp4Q3U4B1 Gm37879-201ENSMUST00000193112 1995 ntBASIC3.15□□□□□ -1.91
Ssbp4Q3U4B1 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Ssbp4Q3U4B1 Gm13228-201ENSMUST00000118937 634 ntBASIC3.15□□□□□ -1.91
Ssbp4Q3U4B1 Gm13627-201ENSMUST00000119700 706 ntBASIC3.15□□□□□ -1.91
Ssbp4Q3U4B1 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC3.15□□□□□ -1.91
Ssbp4Q3U4B1 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Ssbp4Q3U4B1 Gm14564-201ENSMUST00000122159 294 ntBASIC3.15□□□□□ -1.91
Ssbp4Q3U4B1 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC3.15□□□□□ -1.91
Ssbp4Q3U4B1 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC3.15□□□□□ -1.91
Ssbp4Q3U4B1 Gm24061-201ENSMUST00000157489 120 ntBASIC3.15□□□□□ -1.91
Ssbp4Q3U4B1 Gm26159-201ENSMUST00000158968 104 ntBASIC3.15□□□□□ -1.91
Ssbp4Q3U4B1 Gm15946-201ENSMUST00000160654 423 ntBASIC3.15□□□□□ -1.91
Ssbp4Q3U4B1 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Ssbp4Q3U4B1 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Ssbp4Q3U4B1 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Ssbp4Q3U4B1 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Ssbp4Q3U4B1 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Ssbp4Q3U4B1 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Ssbp4Q3U4B1 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Ssbp4Q3U4B1 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Ssbp4Q3U4B1 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC3.15□□□□□ -1.91
Ssbp4Q3U4B1 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC3.15□□□□□ -1.91
Ssbp4Q3U4B1 Mug-ps1-203ENSMUST00000190643 655 ntTSL 3 BASIC3.15□□□□□ -1.91
Ssbp4Q3U4B1 Gm38109-201ENSMUST00000195386 181 ntBASIC3.15□□□□□ -1.91
Ssbp4Q3U4B1 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC3.15□□□□□ -1.91
Ssbp4Q3U4B1 Gm42828-201ENSMUST00000199669 469 ntBASIC3.15□□□□□ -1.91
Ssbp4Q3U4B1 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC3.15□□□□□ -1.91
Ssbp4Q3U4B1 Gm44294-201ENSMUST00000205090 728 ntBASIC3.15□□□□□ -1.91
Ssbp4Q3U4B1 Gm18672-201ENSMUST00000208035 270 ntBASIC3.15□□□□□ -1.91
Ssbp4Q3U4B1 Gm18597-201ENSMUST00000209519 694 ntBASIC3.15□□□□□ -1.91
Ssbp4Q3U4B1 AC093926.1-201ENSMUST00000213730 243 ntBASIC3.15□□□□□ -1.91
Ssbp4Q3U4B1 AC162931.1-201ENSMUST00000214184 267 ntBASIC3.15□□□□□ -1.91
Ssbp4Q3U4B1 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC3.15□□□□□ -1.91
Ssbp4Q3U4B1 CT025526.1-201ENSMUST00000217327 267 ntBASIC3.15□□□□□ -1.91
Ssbp4Q3U4B1 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Ssbp4Q3U4B1 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC3.15□□□□□ -1.91
Ssbp4Q3U4B1 AC116465.1-201ENSMUST00000220324 235 ntBASIC3.15□□□□□ -1.91
Ssbp4Q3U4B1 AC158523.1-201ENSMUST00000221398 328 ntBASIC3.15□□□□□ -1.91
Ssbp4Q3U4B1 AC153662.1-201ENSMUST00000222220 270 ntBASIC3.15□□□□□ -1.91
Ssbp4Q3U4B1 AC173481.1-201ENSMUST00000223351 270 ntBASIC3.15□□□□□ -1.91
Ssbp4Q3U4B1 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Ssbp4Q3U4B1 Gm23736-201ENSMUST00000082553 75 ntBASIC3.15□□□□□ -1.91
Ssbp4Q3U4B1 Gm25126-201ENSMUST00000083343 102 ntBASIC3.15□□□□□ -1.91
Ssbp4Q3U4B1 Mir133a-2-201ENSMUST00000083526 104 ntBASIC3.15□□□□□ -1.91
Ssbp4Q3U4B1 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
Ssbp4Q3U4B1 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Ssbp4Q3U4B1 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Ssbp4Q3U4B1 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Ssbp4Q3U4B1 Gm37868-201ENSMUST00000195578 2735 ntBASIC3.14□□□□□ -1.91
Ssbp4Q3U4B1 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
Ssbp4Q3U4B1 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Ssbp4Q3U4B1 Gm29730-201ENSMUST00000192986 1396 ntBASIC3.14□□□□□ -1.91
Ssbp4Q3U4B1 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Ssbp4Q3U4B1 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Ssbp4Q3U4B1 Gm3683-201ENSMUST00000175701 2513 ntBASIC3.14□□□□□ -1.91
Ssbp4Q3U4B1 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
Ssbp4Q3U4B1 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Ssbp4Q3U4B1 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Ssbp4Q3U4B1 Mir1193-201ENSMUST00000116761 121 ntBASIC3.14□□□□□ -1.91
Ssbp4Q3U4B1 Gm12370-201ENSMUST00000117809 604 ntBASIC3.14□□□□□ -1.91
Ssbp4Q3U4B1 Gm11512-201ENSMUST00000119669 663 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms