Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 Gm20172-201ENSMUST00000193138 1551 ntBASIC3.77□□□□□ -1.81
Col28a1Q2UY11 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
Col28a1Q2UY11 Gm23697-201ENSMUST00000103897 110 ntBASIC3.77□□□□□ -1.81
Col28a1Q2UY11 Gm26273-201ENSMUST00000104180 131 ntBASIC3.77□□□□□ -1.81
Col28a1Q2UY11 Gm25563-201ENSMUST00000104603 74 ntBASIC3.77□□□□□ -1.81
Col28a1Q2UY11 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Col28a1Q2UY11 Gm11372-201ENSMUST00000117348 570 ntBASIC3.77□□□□□ -1.81
Col28a1Q2UY11 Gm8666-201ENSMUST00000117517 292 ntBASIC3.77□□□□□ -1.81
Col28a1Q2UY11 Gm14987-201ENSMUST00000117820 676 ntBASIC3.77□□□□□ -1.81
Col28a1Q2UY11 Gm11923-201ENSMUST00000118135 508 ntBASIC3.77□□□□□ -1.81
Col28a1Q2UY11 Gm6923-201ENSMUST00000118343 406 ntBASIC3.77□□□□□ -1.81
Col28a1Q2UY11 Gm15142-201ENSMUST00000121013 856 ntBASIC3.77□□□□□ -1.81
Col28a1Q2UY11 Gm7618-201ENSMUST00000121643 171 ntBASIC3.77□□□□□ -1.81
Col28a1Q2UY11 Gm25177-201ENSMUST00000122634 117 ntBASIC3.77□□□□□ -1.81
Col28a1Q2UY11 Gm23118-201ENSMUST00000122657 187 ntBASIC3.77□□□□□ -1.81
Col28a1Q2UY11 Gm17216-201ENSMUST00000130872 728 ntTSL 5 BASIC3.77□□□□□ -1.81
Col28a1Q2UY11 Gm25966-201ENSMUST00000157169 117 ntBASIC3.77□□□□□ -1.81
Col28a1Q2UY11 Gm24737-201ENSMUST00000158861 100 ntBASIC3.77□□□□□ -1.81
Col28a1Q2UY11 Gm16290-201ENSMUST00000161175 474 ntBASIC3.77□□□□□ -1.81
Col28a1Q2UY11 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC3.77□□□□□ -1.81
Col28a1Q2UY11 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Col28a1Q2UY11 Gm24757-201ENSMUST00000176987 371 ntBASIC3.77□□□□□ -1.81
Col28a1Q2UY11 Mir713-201ENSMUST00000178651 108 ntBASIC3.77□□□□□ -1.81
Col28a1Q2UY11 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC3.77□□□□□ -1.81
Col28a1Q2UY11 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC3.77□□□□□ -1.81
Col28a1Q2UY11 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Col28a1Q2UY11 Gm29524-201ENSMUST00000190819 699 ntBASIC3.77□□□□□ -1.81
Col28a1Q2UY11 Gm29020-201ENSMUST00000191166 290 ntTSL 5 BASIC3.77□□□□□ -1.81
Col28a1Q2UY11 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC3.77□□□□□ -1.81
Col28a1Q2UY11 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC3.77□□□□□ -1.81
Col28a1Q2UY11 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC3.77□□□□□ -1.81
Col28a1Q2UY11 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC3.77□□□□□ -1.81
Col28a1Q2UY11 AL669916.3-201ENSMUST00000213855 94 ntBASIC3.77□□□□□ -1.81
Col28a1Q2UY11 AL669916.6-201ENSMUST00000214610 94 ntBASIC3.77□□□□□ -1.81
Col28a1Q2UY11 AL669916.4-201ENSMUST00000215976 94 ntBASIC3.77□□□□□ -1.81
Col28a1Q2UY11 AL669916.1-201ENSMUST00000217640 94 ntBASIC3.77□□□□□ -1.81
Col28a1Q2UY11 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC3.77□□□□□ -1.81
Col28a1Q2UY11 Gm2436-201ENSMUST00000219562 774 ntBASIC3.77□□□□□ -1.81
Col28a1Q2UY11 Gm35558-203ENSMUST00000222264 204 ntBASIC3.77□□□□□ -1.81
Col28a1Q2UY11 AC124562.1-201ENSMUST00000224673 337 ntBASIC3.77□□□□□ -1.81
Col28a1Q2UY11 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC3.77□□□□□ -1.81
Col28a1Q2UY11 Gm24446-201ENSMUST00000083982 156 ntBASIC3.77□□□□□ -1.81
Col28a1Q2UY11 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Col28a1Q2UY11 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Col28a1Q2UY11 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Col28a1Q2UY11 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Col28a1Q2UY11 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Col28a1Q2UY11 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Col28a1Q2UY11 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
Col28a1Q2UY11 Gm45176-201ENSMUST00000207696 4096 ntBASIC3.76□□□□□ -1.81
Col28a1Q2UY11 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Col28a1Q2UY11 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Col28a1Q2UY11 Gm24581-201ENSMUST00000103962 133 ntBASIC3.76□□□□□ -1.81
Col28a1Q2UY11 Gm24275-201ENSMUST00000116780 146 ntBASIC3.76□□□□□ -1.81
Col28a1Q2UY11 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC3.76□□□□□ -1.81
Col28a1Q2UY11 Gm14897-201ENSMUST00000118213 207 ntBASIC3.76□□□□□ -1.81
Col28a1Q2UY11 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
Col28a1Q2UY11 Gm7429-201ENSMUST00000118664 348 ntBASIC3.76□□□□□ -1.81
Col28a1Q2UY11 Gm12252-201ENSMUST00000119517 219 ntBASIC3.76□□□□□ -1.81
Col28a1Q2UY11 Gm15364-201ENSMUST00000119618 585 ntBASIC3.76□□□□□ -1.81
Col28a1Q2UY11 Gm22792-201ENSMUST00000157225 133 ntBASIC3.76□□□□□ -1.81
Col28a1Q2UY11 Gm26187-201ENSMUST00000157693 101 ntBASIC3.76□□□□□ -1.81
Col28a1Q2UY11 Gm25335-201ENSMUST00000158043 103 ntBASIC3.76□□□□□ -1.81
Col28a1Q2UY11 Gm23068-201ENSMUST00000158239 293 ntBASIC3.76□□□□□ -1.81
Col28a1Q2UY11 Gm23198-201ENSMUST00000158811 91 ntBASIC3.76□□□□□ -1.81
Col28a1Q2UY11 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC3.76□□□□□ -1.81
Col28a1Q2UY11 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC3.76□□□□□ -1.81
Col28a1Q2UY11 Gm22584-201ENSMUST00000177935 92 ntBASIC3.76□□□□□ -1.81
Col28a1Q2UY11 Gm25670-201ENSMUST00000178423 107 ntBASIC3.76□□□□□ -1.81
Col28a1Q2UY11 Gm26239-201ENSMUST00000178842 107 ntBASIC3.76□□□□□ -1.81
Col28a1Q2UY11 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC3.76□□□□□ -1.81
Col28a1Q2UY11 Gm24267-201ENSMUST00000179841 107 ntBASIC3.76□□□□□ -1.81
Col28a1Q2UY11 Gm23648-201ENSMUST00000180301 107 ntBASIC3.76□□□□□ -1.81
Col28a1Q2UY11 Gm28008-201ENSMUST00000184021 186 ntBASIC3.76□□□□□ -1.81
Col28a1Q2UY11 Gm8600-201ENSMUST00000186320 905 ntBASIC3.76□□□□□ -1.81
Col28a1Q2UY11 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC3.76□□□□□ -1.81
Col28a1Q2UY11 Gm28625-201ENSMUST00000188309 205 ntBASIC3.76□□□□□ -1.81
Col28a1Q2UY11 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Col28a1Q2UY11 Gm38234-201ENSMUST00000195204 421 ntBASIC3.76□□□□□ -1.81
Col28a1Q2UY11 Gm4248-201ENSMUST00000196905 316 ntBASIC3.76□□□□□ -1.81
Col28a1Q2UY11 Gm43541-201ENSMUST00000197208 581 ntBASIC3.76□□□□□ -1.81
Col28a1Q2UY11 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC3.76□□□□□ -1.81
Col28a1Q2UY11 Gm43976-201ENSMUST00000203637 235 ntBASIC3.76□□□□□ -1.81
Col28a1Q2UY11 Gm44687-201ENSMUST00000204975 235 ntBASIC3.76□□□□□ -1.81
Col28a1Q2UY11 Gm19761-201ENSMUST00000205372 391 ntBASIC3.76□□□□□ -1.81
Col28a1Q2UY11 Gm4528-201ENSMUST00000207905 551 ntBASIC3.76□□□□□ -1.81
Col28a1Q2UY11 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC3.76□□□□□ -1.81
Col28a1Q2UY11 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Col28a1Q2UY11 Gm17890-201ENSMUST00000221419 757 ntBASIC3.76□□□□□ -1.81
Col28a1Q2UY11 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Col28a1Q2UY11 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC3.76□□□□□ -1.81
Col28a1Q2UY11 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC3.76□□□□□ -1.81
Col28a1Q2UY11 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
Col28a1Q2UY11 Gm23404-201ENSMUST00000082543 97 ntBASIC3.76□□□□□ -1.81
Col28a1Q2UY11 Gm24950-201ENSMUST00000082768 191 ntBASIC3.76□□□□□ -1.81
Col28a1Q2UY11 Gm24292-201ENSMUST00000082888 107 ntBASIC3.76□□□□□ -1.81
Col28a1Q2UY11 Gm23506-201ENSMUST00000083077 107 ntBASIC3.76□□□□□ -1.81
Col28a1Q2UY11 Gm23971-201ENSMUST00000083317 191 ntBASIC3.76□□□□□ -1.81
Col28a1Q2UY11 Gm25581-201ENSMUST00000083410 164 ntBASIC3.76□□□□□ -1.81
Col28a1Q2UY11 Mir132-201ENSMUST00000083603 66 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms