Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC2.32□□□□□ -2.04
Nkx3-1P97436 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Nkx3-1P97436 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
Nkx3-1P97436 Scgb1b2-201ENSMUST00000080635 424 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Nkx3-1P97436 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Nkx3-1P97436 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
Nkx3-1P97436 CT009504.1-201ENSMUST00000218252 3330 ntBASIC2.32□□□□□ -2.04
Nkx3-1P97436 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC2.32□□□□□ -2.04
Nkx3-1P97436 Olfr183-202ENSMUST00000206303 1862 ntAPPRIS P1 TSL 3 BASIC2.32□□□□□ -2.04
Nkx3-1P97436 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Nkx3-1P97436 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Nkx3-1P97436 AC154681.1-201ENSMUST00000225876 1735 ntBASIC2.31□□□□□ -2.04
Nkx3-1P97436 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC2.31□□□□□ -2.04
Nkx3-1P97436 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Nkx3-1P97436 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Nkx3-1P97436 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Nkx3-1P97436 Gm43780-201ENSMUST00000196510 3600 ntBASIC2.31□□□□□ -2.04
Nkx3-1P97436 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Nkx3-1P97436 Mir294-201ENSMUST00000104710 84 ntBASIC2.31□□□□□ -2.04
Nkx3-1P97436 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC2.31□□□□□ -2.04
Nkx3-1P97436 Gm14623-201ENSMUST00000121398 603 ntBASIC2.31□□□□□ -2.04
Nkx3-1P97436 Gm11344-201ENSMUST00000122011 335 ntBASIC2.31□□□□□ -2.04
Nkx3-1P97436 Gm13131-201ENSMUST00000122228 321 ntBASIC2.31□□□□□ -2.04
Nkx3-1P97436 Gm14903-201ENSMUST00000122435 537 ntBASIC2.31□□□□□ -2.04
Nkx3-1P97436 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC2.31□□□□□ -2.04
Nkx3-1P97436 Gm16373-201ENSMUST00000129517 303 ntBASIC2.31□□□□□ -2.04
Nkx3-1P97436 Gm16533-201ENSMUST00000140035 228 ntBASIC2.31□□□□□ -2.04
Nkx3-1P97436 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC2.31□□□□□ -2.04
Nkx3-1P97436 Gm22766-201ENSMUST00000158372 99 ntBASIC2.31□□□□□ -2.04
Nkx3-1P97436 Gm24736-201ENSMUST00000158862 130 ntBASIC2.31□□□□□ -2.04
Nkx3-1P97436 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC2.31□□□□□ -2.04
Nkx3-1P97436 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC2.31□□□□□ -2.04
Nkx3-1P97436 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Nkx3-1P97436 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC2.31□□□□□ -2.04
Nkx3-1P97436 Mir6386-201ENSMUST00000183558 104 ntBASIC2.31□□□□□ -2.04
Nkx3-1P97436 Mir8103-201ENSMUST00000183945 107 ntBASIC2.31□□□□□ -2.04
Nkx3-1P97436 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Nkx3-1P97436 Gm37340-201ENSMUST00000193124 759 ntTSL 5 BASIC2.31□□□□□ -2.04
Nkx3-1P97436 Gm44865-201ENSMUST00000207240 531 ntBASIC2.31□□□□□ -2.04
Nkx3-1P97436 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC2.31□□□□□ -2.04
Nkx3-1P97436 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Nkx3-1P97436 CT025579.1-201ENSMUST00000223779 366 ntBASIC2.31□□□□□ -2.04
Nkx3-1P97436 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Nkx3-1P97436 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Nkx3-1P97436 Gm26458-201ENSMUST00000082832 128 ntBASIC2.31□□□□□ -2.04
Nkx3-1P97436 Olfr1056-201ENSMUST00000099893 1079 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Nkx3-1P97436 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Nkx3-1P97436 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Nkx3-1P97436 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Nkx3-1P97436 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Nkx3-1P97436 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Nkx3-1P97436 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC2.3□□□□□ -2.04
Nkx3-1P97436 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Nkx3-1P97436 Gm24274-201ENSMUST00000116787 124 ntBASIC2.3□□□□□ -2.04
Nkx3-1P97436 Gm11221-201ENSMUST00000117230 597 ntBASIC2.3□□□□□ -2.04
Nkx3-1P97436 Gm12492-201ENSMUST00000117665 564 ntBASIC2.3□□□□□ -2.04
Nkx3-1P97436 Gm16171-201ENSMUST00000118004 324 ntBASIC2.3□□□□□ -2.04
Nkx3-1P97436 Gm14593-201ENSMUST00000119948 294 ntBASIC2.3□□□□□ -2.04
Nkx3-1P97436 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
Nkx3-1P97436 Gm24075-201ENSMUST00000158175 72 ntBASIC2.3□□□□□ -2.04
Nkx3-1P97436 Gm4468-201ENSMUST00000170206 294 ntBASIC2.3□□□□□ -2.04
Nkx3-1P97436 Gm18415-201ENSMUST00000177464 647 ntBASIC2.3□□□□□ -2.04
Nkx3-1P97436 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Nkx3-1P97436 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Nkx3-1P97436 Gm29045-201ENSMUST00000187278 698 ntBASIC2.3□□□□□ -2.04
Nkx3-1P97436 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC2.3□□□□□ -2.04
Nkx3-1P97436 Gm44030-201ENSMUST00000204865 432 ntBASIC2.3□□□□□ -2.04
Nkx3-1P97436 Gm44665-201ENSMUST00000205381 251 ntBASIC2.3□□□□□ -2.04
Nkx3-1P97436 AC159472.1-201ENSMUST00000218178 463 ntBASIC2.3□□□□□ -2.04
Nkx3-1P97436 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Nkx3-1P97436 Gm26176-201ENSMUST00000083795 105 ntBASIC2.3□□□□□ -2.04
Nkx3-1P97436 Gm23846-201ENSMUST00000083835 107 ntBASIC2.3□□□□□ -2.04
Nkx3-1P97436 Gm4017-201ENSMUST00000084813 338 ntBASIC2.3□□□□□ -2.04
Nkx3-1P97436 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Nkx3-1P97436 Gm16436-201ENSMUST00000121510 1607 ntBASIC2.3□□□□□ -2.04
Nkx3-1P97436 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Nkx3-1P97436 Gm45104-201ENSMUST00000208748 4350 ntBASIC2.3□□□□□ -2.04
Nkx3-1P97436 AC117199.1-201ENSMUST00000219940 3132 ntBASIC2.29□□□□□ -2.04
Nkx3-1P97436 Gm13136-201ENSMUST00000121031 2950 ntBASIC2.29□□□□□ -2.04
Nkx3-1P97436 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Nkx3-1P97436 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
Nkx3-1P97436 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Nkx3-1P97436 AC169038.1-201ENSMUST00000227378 1352 ntBASIC2.29□□□□□ -2.04
Nkx3-1P97436 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC2.29□□□□□ -2.04
Nkx3-1P97436 Gm22750-201ENSMUST00000102076 103 ntBASIC2.29□□□□□ -2.04
Nkx3-1P97436 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Nkx3-1P97436 Gm12803-201ENSMUST00000118907 821 ntBASIC2.29□□□□□ -2.04
Nkx3-1P97436 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
Nkx3-1P97436 Gm2012-201ENSMUST00000121900 1131 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Nkx3-1P97436 Gm14907-201ENSMUST00000121948 854 ntBASIC2.29□□□□□ -2.04
Nkx3-1P97436 Gm15555-201ENSMUST00000128832 713 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
Nkx3-1P97436 Gm16331-201ENSMUST00000144274 498 ntBASIC2.29□□□□□ -2.04
Nkx3-1P97436 Gm23409-201ENSMUST00000158516 237 ntBASIC2.29□□□□□ -2.04
Nkx3-1P97436 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
Nkx3-1P97436 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Nkx3-1P97436 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC2.29□□□□□ -2.04
Nkx3-1P97436 Mir5118-201ENSMUST00000175551 67 ntBASIC2.29□□□□□ -2.04
Nkx3-1P97436 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Nkx3-1P97436 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Nkx3-1P97436 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 95.4 ms