Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 4930470O06Rik-201ENSMUST00000209438 662 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Hmgb1P63158 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Hmgb1P63158 Gm6776-201ENSMUST00000057752 900 ntBASIC4.49□□□□□ -1.69
Hmgb1P63158 Gm22508-201ENSMUST00000082772 110 ntBASIC4.49□□□□□ -1.69
Hmgb1P63158 Gm42659-201ENSMUST00000196955 1754 ntBASIC4.49□□□□□ -1.69
Hmgb1P63158 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC4.49□□□□□ -1.69
Hmgb1P63158 Gm38211-201ENSMUST00000192814 7217 ntBASIC4.49□□□□□ -1.69
Hmgb1P63158 Gm42486-201ENSMUST00000200369 3486 ntBASIC4.49□□□□□ -1.69
Hmgb1P63158 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Hmgb1P63158 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
Hmgb1P63158 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Hmgb1P63158 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Hmgb1P63158 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Hmgb1P63158 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Hmgb1P63158 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
Hmgb1P63158 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Hmgb1P63158 Gm43486-201ENSMUST00000196431 4339 ntBASIC4.48□□□□□ -1.69
Hmgb1P63158 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
Hmgb1P63158 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
Hmgb1P63158 Gm15223-201ENSMUST00000120989 826 ntBASIC4.48□□□□□ -1.69
Hmgb1P63158 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Hmgb1P63158 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
Hmgb1P63158 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Hmgb1P63158 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Hmgb1P63158 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Hmgb1P63158 Gm7329-201ENSMUST00000185915 210 ntBASIC4.48□□□□□ -1.69
Hmgb1P63158 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Hmgb1P63158 Gm6842-201ENSMUST00000211361 390 ntBASIC4.48□□□□□ -1.69
Hmgb1P63158 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC4.48□□□□□ -1.69
Hmgb1P63158 Gm46327-201ENSMUST00000218240 365 ntBASIC4.48□□□□□ -1.69
Hmgb1P63158 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Hmgb1P63158 AC101984.1-201ENSMUST00000219639 402 ntBASIC4.48□□□□□ -1.69
Hmgb1P63158 Ifngas1-201ENSMUST00000220034 1121 ntTSL 2 BASIC4.48□□□□□ -1.69
Hmgb1P63158 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC4.48□□□□□ -1.69
Hmgb1P63158 AC133517.1-202ENSMUST00000224409 233 ntBASIC4.48□□□□□ -1.69
Hmgb1P63158 AC166095.1-203ENSMUST00000224591 233 ntBASIC4.48□□□□□ -1.69
Hmgb1P63158 AC154626.1-201ENSMUST00000226070 311 ntBASIC4.48□□□□□ -1.69
Hmgb1P63158 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Hmgb1P63158 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Hmgb1P63158 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
Hmgb1P63158 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Hmgb1P63158 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Hmgb1P63158 Gm37045-201ENSMUST00000192016 2463 ntBASIC4.47□□□□□ -1.69
Hmgb1P63158 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC4.47□□□□□ -1.69
Hmgb1P63158 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC4.47□□□□□ -1.69
Hmgb1P63158 Gm12328-201ENSMUST00000118611 197 ntBASIC4.47□□□□□ -1.69
Hmgb1P63158 Gm7219-201ENSMUST00000119619 297 ntBASIC4.47□□□□□ -1.69
Hmgb1P63158 Gm12466-201ENSMUST00000121199 620 ntBASIC4.47□□□□□ -1.69
Hmgb1P63158 Gm15529-201ENSMUST00000121833 994 ntBASIC4.47□□□□□ -1.69
Hmgb1P63158 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC4.47□□□□□ -1.69
Hmgb1P63158 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC4.47□□□□□ -1.69
Hmgb1P63158 Gm24720-201ENSMUST00000157518 166 ntBASIC4.47□□□□□ -1.69
Hmgb1P63158 Gm26320-201ENSMUST00000157742 306 ntBASIC4.47□□□□□ -1.69
Hmgb1P63158 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC4.47□□□□□ -1.69
Hmgb1P63158 Mir6414-201ENSMUST00000183685 82 ntBASIC4.47□□□□□ -1.69
Hmgb1P63158 Mir6537-201ENSMUST00000184150 110 ntBASIC4.47□□□□□ -1.69
Hmgb1P63158 Gm29405-201ENSMUST00000187204 370 ntTSL 5 BASIC4.47□□□□□ -1.69
Hmgb1P63158 Gm29557-201ENSMUST00000188245 370 ntTSL 5 BASIC4.47□□□□□ -1.69
Hmgb1P63158 Gm6445-201ENSMUST00000189515 1112 ntBASIC4.47□□□□□ -1.69
Hmgb1P63158 Gm28174-201ENSMUST00000191003 370 ntTSL 5 BASIC4.47□□□□□ -1.69
Hmgb1P63158 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Hmgb1P63158 Gm44961-201ENSMUST00000207450 196 ntBASIC4.47□□□□□ -1.69
Hmgb1P63158 AC153541.1-201ENSMUST00000213786 294 ntBASIC4.47□□□□□ -1.69
Hmgb1P63158 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC4.47□□□□□ -1.69
Hmgb1P63158 AC157654.1-201ENSMUST00000224130 820 ntBASIC4.47□□□□□ -1.69
Hmgb1P63158 AC241593.1-201ENSMUST00000224768 397 ntBASIC4.47□□□□□ -1.69
Hmgb1P63158 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Hmgb1P63158 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Hmgb1P63158 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Hmgb1P63158 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Hmgb1P63158 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC4.46□□□□□ -1.69
Hmgb1P63158 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
Hmgb1P63158 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
Hmgb1P63158 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Hmgb1P63158 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
Hmgb1P63158 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC4.46□□□□□ -1.7
Hmgb1P63158 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC4.46□□□□□ -1.7
Hmgb1P63158 Gm14417-201ENSMUST00000120036 1074 ntBASIC4.46□□□□□ -1.7
Hmgb1P63158 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC4.46□□□□□ -1.7
Hmgb1P63158 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC4.46□□□□□ -1.7
Hmgb1P63158 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Hmgb1P63158 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC4.46□□□□□ -1.7
Hmgb1P63158 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC4.46□□□□□ -1.7
Hmgb1P63158 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC4.46□□□□□ -1.7
Hmgb1P63158 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC4.46□□□□□ -1.7
Hmgb1P63158 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Hmgb1P63158 Gm8207-201ENSMUST00000171204 502 ntBASIC4.46□□□□□ -1.7
Hmgb1P63158 Vmn2r-ps149-201ENSMUST00000188423 590 ntBASIC4.46□□□□□ -1.7
Hmgb1P63158 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC4.46□□□□□ -1.7
Hmgb1P63158 Gm4644-201ENSMUST00000197587 400 ntBASIC4.46□□□□□ -1.7
Hmgb1P63158 Gm19202-201ENSMUST00000198096 808 ntBASIC4.46□□□□□ -1.7
Hmgb1P63158 Gm43804-201ENSMUST00000198280 456 ntBASIC4.46□□□□□ -1.7
Hmgb1P63158 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
Hmgb1P63158 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC4.46□□□□□ -1.7
Hmgb1P63158 CT010511.1-201ENSMUST00000224570 315 ntBASIC4.46□□□□□ -1.7
Hmgb1P63158 AL672194.1-201ENSMUST00000224841 603 ntBASIC4.46□□□□□ -1.7
Hmgb1P63158 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Hmgb1P63158 Gm22350-201ENSMUST00000083924 156 ntBASIC4.46□□□□□ -1.7
Hmgb1P63158 Gm43889-201ENSMUST00000203950 3681 ntBASIC4.46□□□□□ -1.7
Hmgb1P63158 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms