Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Sox3P53784 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Sox3P53784 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Sox3P53784 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Sox3P53784 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Sox3P53784 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Sox3P53784 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Sox3P53784 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Sox3P53784 Gm8403-201ENSMUST00000189712 1298 ntBASIC3.05□□□□□ -1.92
Sox3P53784 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Sox3P53784 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Sox3P53784 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Sox3P53784 Gm29389-201ENSMUST00000191562 352 ntBASIC3.05□□□□□ -1.92
Sox3P53784 Gm6321-201ENSMUST00000194460 1090 ntBASIC3.05□□□□□ -1.92
Sox3P53784 Gm34091-201ENSMUST00000200875 604 ntBASIC3.05□□□□□ -1.92
Sox3P53784 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC3.05□□□□□ -1.92
Sox3P53784 Gm45551-201ENSMUST00000211459 928 ntBASIC3.05□□□□□ -1.92
Sox3P53784 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC3.05□□□□□ -1.92
Sox3P53784 Gm19987-201ENSMUST00000216339 499 ntBASIC3.05□□□□□ -1.92
Sox3P53784 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC3.05□□□□□ -1.92
Sox3P53784 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Sox3P53784 AC154426.1-201ENSMUST00000225614 1132 ntBASIC3.05□□□□□ -1.92
Sox3P53784 AC124569.1-201ENSMUST00000225932 101 ntBASIC3.05□□□□□ -1.92
Sox3P53784 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Sox3P53784 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
Sox3P53784 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Sox3P53784 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Sox3P53784 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Sox3P53784 Gm650-201ENSMUST00000144428 1551 ntBASIC3.04□□□□□ -1.92
Sox3P53784 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Sox3P53784 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Sox3P53784 Gm15125-201ENSMUST00000116185 800 ntBASIC3.04□□□□□ -1.92
Sox3P53784 Gm13504-201ENSMUST00000117490 316 ntBASIC3.04□□□□□ -1.92
Sox3P53784 Gm11367-201ENSMUST00000117802 120 ntBASIC3.04□□□□□ -1.92
Sox3P53784 Gm7071-201ENSMUST00000120458 462 ntBASIC3.04□□□□□ -1.92
Sox3P53784 Gm15147-201ENSMUST00000122263 483 ntBASIC3.04□□□□□ -1.92
Sox3P53784 Gm22960-201ENSMUST00000122517 104 ntBASIC3.04□□□□□ -1.92
Sox3P53784 Gm16363-201ENSMUST00000132460 877 ntBASIC3.04□□□□□ -1.92
Sox3P53784 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC3.04□□□□□ -1.92
Sox3P53784 Gm22036-201ENSMUST00000157279 215 ntBASIC3.04□□□□□ -1.92
Sox3P53784 Gm24787-201ENSMUST00000157380 123 ntBASIC3.04□□□□□ -1.92
Sox3P53784 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC3.04□□□□□ -1.92
Sox3P53784 Gm18667-201ENSMUST00000186523 484 ntBASIC3.04□□□□□ -1.92
Sox3P53784 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Sox3P53784 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC3.04□□□□□ -1.92
Sox3P53784 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC3.04□□□□□ -1.92
Sox3P53784 Gm42796-201ENSMUST00000199913 1087 ntBASIC3.04□□□□□ -1.92
Sox3P53784 Gm7652-201ENSMUST00000200440 1151 ntBASIC3.04□□□□□ -1.92
Sox3P53784 Gm29920-201ENSMUST00000206876 754 ntBASIC3.04□□□□□ -1.92
Sox3P53784 Gm45312-201ENSMUST00000210566 311 ntBASIC3.04□□□□□ -1.92
Sox3P53784 AC107808.2-201ENSMUST00000213542 1027 ntTSL 5 BASIC3.04□□□□□ -1.92
Sox3P53784 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC3.04□□□□□ -1.92
Sox3P53784 AC134254.5-201ENSMUST00000223436 400 ntBASIC3.04□□□□□ -1.92
Sox3P53784 AC147639.1-201ENSMUST00000224216 661 ntBASIC3.04□□□□□ -1.92
Sox3P53784 CT025525.1-201ENSMUST00000226325 1054 ntBASIC3.04□□□□□ -1.92
Sox3P53784 AC108416.2-201ENSMUST00000226792 367 ntBASIC3.04□□□□□ -1.92
Sox3P53784 AC164100.1-201ENSMUST00000227214 508 ntBASIC3.04□□□□□ -1.92
Sox3P53784 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Sox3P53784 Olfr815-201ENSMUST00000071557 951 ntBASIC3.04□□□□□ -1.92
Sox3P53784 Olfr814-201ENSMUST00000081367 933 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Sox3P53784 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Sox3P53784 Gm8074-201ENSMUST00000095071 252 ntBASIC3.04□□□□□ -1.92
Sox3P53784 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Sox3P53784 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Sox3P53784 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Sox3P53784 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Sox3P53784 Gm4855-201ENSMUST00000192270 1967 ntBASIC3.03□□□□□ -1.92
Sox3P53784 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC3.03□□□□□ -1.92
Sox3P53784 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
Sox3P53784 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
Sox3P53784 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Sox3P53784 Mir693-201ENSMUST00000102187 89 ntBASIC3.03□□□□□ -1.92
Sox3P53784 Gm14913-201ENSMUST00000120011 1093 ntBASIC3.03□□□□□ -1.92
Sox3P53784 Gm14008-201ENSMUST00000120483 274 ntBASIC3.03□□□□□ -1.92
Sox3P53784 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Sox3P53784 Gm25557-201ENSMUST00000158084 315 ntBASIC3.03□□□□□ -1.92
Sox3P53784 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC3.03□□□□□ -1.92
Sox3P53784 Ear-ps10-201ENSMUST00000161871 460 ntBASIC3.03□□□□□ -1.92
Sox3P53784 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC3.03□□□□□ -1.92
Sox3P53784 Gm17187-201ENSMUST00000164622 410 ntBASIC3.03□□□□□ -1.92
Sox3P53784 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC3.03□□□□□ -1.92
Sox3P53784 Gm18520-201ENSMUST00000174783 658 ntBASIC3.03□□□□□ -1.92
Sox3P53784 Gm25707-201ENSMUST00000175120 96 ntBASIC3.03□□□□□ -1.92
Sox3P53784 Gm24811-201ENSMUST00000175313 100 ntBASIC3.03□□□□□ -1.92
Sox3P53784 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC3.03□□□□□ -1.92
Sox3P53784 Gm26866-201ENSMUST00000180414 802 ntBASIC3.03□□□□□ -1.92
Sox3P53784 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Sox3P53784 Gm28688-201ENSMUST00000187301 268 ntBASIC3.03□□□□□ -1.92
Sox3P53784 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Sox3P53784 Gm37578-201ENSMUST00000192256 1177 ntBASIC3.03□□□□□ -1.92
Sox3P53784 Gm37576-201ENSMUST00000194228 372 ntBASIC3.03□□□□□ -1.92
Sox3P53784 Gm24350-202ENSMUST00000198309 132 ntBASIC3.03□□□□□ -1.92
Sox3P53784 Gm43407-201ENSMUST00000199816 317 ntBASIC3.03□□□□□ -1.92
Sox3P53784 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Sox3P53784 Gm8423-201ENSMUST00000211387 607 ntBASIC3.03□□□□□ -1.92
Sox3P53784 AC174457.1-201ENSMUST00000215932 226 ntBASIC3.03□□□□□ -1.92
Sox3P53784 AC159476.2-201ENSMUST00000216221 418 ntBASIC3.03□□□□□ -1.92
Sox3P53784 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC3.03□□□□□ -1.92
Sox3P53784 AC117588.3-201ENSMUST00000228517 325 ntBASIC3.03□□□□□ -1.92
Sox3P53784 AC121114.1-201ENSMUST00000228522 570 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms