Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm11490-201ENSMUST00000118128 272 ntBASIC5.11□□□□□ -1.59
RaraP11416 Gm25824-201ENSMUST00000157092 121 ntBASIC5.11□□□□□ -1.59
RaraP11416 Gm24501-201ENSMUST00000158452 62 ntBASIC5.11□□□□□ -1.59
RaraP11416 Gm25906-201ENSMUST00000158489 126 ntBASIC5.11□□□□□ -1.59
RaraP11416 Gm23312-201ENSMUST00000158774 102 ntBASIC5.11□□□□□ -1.59
RaraP11416 Gm20545-201ENSMUST00000174739 210 ntBASIC5.11□□□□□ -1.59
RaraP11416 Gm2950-201ENSMUST00000185530 520 ntBASIC5.11□□□□□ -1.59
RaraP11416 Gm6137-201ENSMUST00000187552 578 ntBASIC5.11□□□□□ -1.59
RaraP11416 Gm7837-201ENSMUST00000190873 412 ntBASIC5.11□□□□□ -1.59
RaraP11416 Gm8939-201ENSMUST00000192577 964 ntBASIC5.11□□□□□ -1.59
RaraP11416 Gm37732-201ENSMUST00000194377 316 ntBASIC5.11□□□□□ -1.59
RaraP11416 Gm2011-203ENSMUST00000203750 435 ntBASIC5.11□□□□□ -1.59
RaraP11416 Gm44059-201ENSMUST00000204048 351 ntBASIC5.11□□□□□ -1.59
RaraP11416 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC5.11□□□□□ -1.59
RaraP11416 AC152979.3-201ENSMUST00000217720 479 ntBASIC5.11□□□□□ -1.59
RaraP11416 AC155805.1-201ENSMUST00000222419 3808 ntBASIC5.11□□□□□ -1.59
RaraP11416 AC159252.1-201ENSMUST00000224450 553 ntBASIC5.11□□□□□ -1.59
RaraP11416 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
RaraP11416 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC5.11□□□□□ -1.59
RaraP11416 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
RaraP11416 Gm7676-201ENSMUST00000084055 319 ntBASIC5.11□□□□□ -1.59
RaraP11416 Gm25821-201ENSMUST00000093657 133 ntBASIC5.11□□□□□ -1.59
RaraP11416 March1-203ENSMUST00000098708 4000 ntAPPRIS P3 TSL 5 BASIC5.11□□□□□ -1.59
RaraP11416 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
RaraP11416 Olfr676-204ENSMUST00000219602 2802 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
RaraP11416 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
RaraP11416 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
RaraP11416 Gm45854-201ENSMUST00000211857 3488 ntBASIC5.11□□□□□ -1.59
RaraP11416 Olfr291-202ENSMUST00000217039 3471 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
RaraP11416 Slc22a22-201ENSMUST00000022995 2015 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RaraP11416 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RaraP11416 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC5.1□□□□□ -1.59
RaraP11416 Vmn1r185-203ENSMUST00000227264 5589 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
RaraP11416 Mlip-205ENSMUST00000183955 3069 ntAPPRIS P5 TSL 5 BASIC5.1□□□□□ -1.59
RaraP11416 Olfr685-203ENSMUST00000214712 3326 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
RaraP11416 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC5.1□□□□□ -1.59
RaraP11416 Olfr552-202ENSMUST00000215712 4206 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
RaraP11416 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC5.1□□□□□ -1.59
RaraP11416 Fam135a-206ENSMUST00000187369 4976 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
RaraP11416 Gm23836-201ENSMUST00000104434 129 ntBASIC5.1□□□□□ -1.59
RaraP11416 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
RaraP11416 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
RaraP11416 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC5.1□□□□□ -1.59
RaraP11416 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RaraP11416 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC5.1□□□□□ -1.59
RaraP11416 Gm23350-201ENSMUST00000158429 103 ntBASIC5.1□□□□□ -1.59
RaraP11416 Mir3110-201ENSMUST00000175053 80 ntBASIC5.1□□□□□ -1.59
RaraP11416 Gm25956-201ENSMUST00000175115 217 ntBASIC5.1□□□□□ -1.59
RaraP11416 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC5.1□□□□□ -1.59
RaraP11416 Gm8674-201ENSMUST00000179367 3047 ntBASIC5.1□□□□□ -1.59
RaraP11416 Zfp799-201ENSMUST00000179695 5833 ntTSL 3 BASIC5.1□□□□□ -1.59
RaraP11416 Gm9320-201ENSMUST00000184151 473 ntBASIC5.1□□□□□ -1.59
RaraP11416 Gm27286-201ENSMUST00000184934 179 ntBASIC5.1□□□□□ -1.59
RaraP11416 Lockd-204ENSMUST00000184991 243 ntTSL 5 BASIC5.1□□□□□ -1.59
RaraP11416 Gm37970-201ENSMUST00000193865 1732 ntBASIC5.1□□□□□ -1.59
RaraP11416 Igkv4-65-201ENSMUST00000196986 358 ntBASIC5.1□□□□□ -1.59
RaraP11416 Gm43724-201ENSMUST00000197516 226 ntBASIC5.1□□□□□ -1.59
RaraP11416 Gm7825-201ENSMUST00000204046 416 ntBASIC5.1□□□□□ -1.59
RaraP11416 Gm44543-201ENSMUST00000209136 396 ntBASIC5.1□□□□□ -1.59
RaraP11416 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RaraP11416 Gm5373-201ENSMUST00000212113 1050 ntBASIC5.1□□□□□ -1.59
RaraP11416 Olfr1484-203ENSMUST00000215567 3699 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
RaraP11416 AC168881.1-201ENSMUST00000226018 430 ntBASIC5.1□□□□□ -1.59
RaraP11416 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC5.1□□□□□ -1.59
RaraP11416 Agbl1-201ENSMUST00000026854 3452 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
RaraP11416 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RaraP11416 Gm23796-201ENSMUST00000084011 160 ntBASIC5.1□□□□□ -1.59
RaraP11416 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RaraP11416 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC5.1□□□□□ -1.59
RaraP11416 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
RaraP11416 Gm15304-201ENSMUST00000122150 2640 ntBASIC5.1□□□□□ -1.59
RaraP11416 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RaraP11416 Gm19301-201ENSMUST00000174283 2210 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RaraP11416 Dmd-201ENSMUST00000113991 4438 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RaraP11416 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RaraP11416 Gpr21-201ENSMUST00000065441 3619 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RaraP11416 Ankrd28-204ENSMUST00000227089 3522 ntBASIC5.09□□□□□ -1.59
RaraP11416 Olfr344-202ENSMUST00000215879 7675 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
RaraP11416 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC5.09□□□□□ -1.59
RaraP11416 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
RaraP11416 Gm13876-201ENSMUST00000118451 261 ntBASIC5.09□□□□□ -1.59
RaraP11416 Gm14541-201ENSMUST00000118985 157 ntBASIC5.09□□□□□ -1.59
RaraP11416 Gm8217-201ENSMUST00000119136 465 ntBASIC5.09□□□□□ -1.59
RaraP11416 Gm13396-201ENSMUST00000120617 271 ntBASIC5.09□□□□□ -1.59
RaraP11416 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC5.09□□□□□ -1.59
RaraP11416 Gm26347-201ENSMUST00000157526 131 ntBASIC5.09□□□□□ -1.59
RaraP11416 Gm23534-201ENSMUST00000157539 97 ntBASIC5.09□□□□□ -1.59
RaraP11416 Gm3053-201ENSMUST00000161709 616 ntBASIC5.09□□□□□ -1.59
RaraP11416 Gm22114-201ENSMUST00000177756 107 ntBASIC5.09□□□□□ -1.59
RaraP11416 Gm24168-201ENSMUST00000178825 107 ntBASIC5.09□□□□□ -1.59
RaraP11416 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC5.09□□□□□ -1.59
RaraP11416 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RaraP11416 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC5.09□□□□□ -1.59
RaraP11416 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC5.09□□□□□ -1.59
RaraP11416 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC5.09□□□□□ -1.59
RaraP11416 Gm23300-201ENSMUST00000082712 125 ntBASIC5.09□□□□□ -1.59
RaraP11416 Gm25202-201ENSMUST00000082838 191 ntBASIC5.09□□□□□ -1.59
RaraP11416 Mir188-201ENSMUST00000083464 68 ntBASIC5.09□□□□□ -1.59
RaraP11416 Gm23741-201ENSMUST00000097237 171 ntBASIC5.09□□□□□ -1.59
RaraP11416 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 74.6 ms