Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm23980-201ENSMUST00000157135 158 ntBASIC2.57□□□□□ -2
Col1a1P11087 Ear-ps12-201ENSMUST00000161720 451 ntBASIC2.57□□□□□ -2
Col1a1P11087 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC2.57□□□□□ -2
Col1a1P11087 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC2.57□□□□□ -2
Col1a1P11087 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC2.57□□□□□ -2
Col1a1P11087 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC2.57□□□□□ -2
Col1a1P11087 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC2.57□□□□□ -2
Col1a1P11087 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC2.57□□□□□ -2
Col1a1P11087 Gm37543-201ENSMUST00000192443 1031 ntBASIC2.57□□□□□ -2
Col1a1P11087 Gm43967-201ENSMUST00000203787 301 ntBASIC2.57□□□□□ -2
Col1a1P11087 Gm43974-201ENSMUST00000205080 684 ntBASIC2.57□□□□□ -2
Col1a1P11087 AC079644.1-201ENSMUST00000220586 405 ntBASIC2.57□□□□□ -2
Col1a1P11087 AC159263.3-201ENSMUST00000223434 460 ntBASIC2.57□□□□□ -2
Col1a1P11087 AC107369.1-201ENSMUST00000227373 860 ntBASIC2.57□□□□□ -2
Col1a1P11087 AC126690.1-201ENSMUST00000228898 397 ntBASIC2.57□□□□□ -2
Col1a1P11087 Tas2r106-201ENSMUST00000076756 927 ntAPPRIS P1 BASIC2.57□□□□□ -2
Col1a1P11087 Gm23447-201ENSMUST00000082798 163 ntBASIC2.57□□□□□ -2
Col1a1P11087 Gm22723-201ENSMUST00000083820 129 ntBASIC2.57□□□□□ -2
Col1a1P11087 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Col1a1P11087 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Col1a1P11087 Gm9495-201ENSMUST00000200846 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Col1a1P11087 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Col1a1P11087 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.56□□□□□ -2
Col1a1P11087 Mir542-201ENSMUST00000102186 85 ntBASIC2.56□□□□□ -2
Col1a1P11087 Gm24379-201ENSMUST00000122695 86 ntBASIC2.56□□□□□ -2
Col1a1P11087 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC2.56□□□□□ -2
Col1a1P11087 Gm25836-201ENSMUST00000158918 123 ntBASIC2.56□□□□□ -2
Col1a1P11087 Gm22093-201ENSMUST00000158980 111 ntBASIC2.56□□□□□ -2
Col1a1P11087 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC2.56□□□□□ -2
Col1a1P11087 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC2.56□□□□□ -2
Col1a1P11087 Mir8103-201ENSMUST00000183945 107 ntBASIC2.56□□□□□ -2
Col1a1P11087 Gm27470-201ENSMUST00000184070 210 ntBASIC2.56□□□□□ -2
Col1a1P11087 Gm37550-201ENSMUST00000193230 463 ntBASIC2.56□□□□□ -2
Col1a1P11087 Mir3087-201ENSMUST00000199405 56 ntBASIC2.56□□□□□ -2
Col1a1P11087 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Col1a1P11087 Mir365-2-201ENSMUST00000083555 112 ntBASIC2.56□□□□□ -2
Col1a1P11087 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
Col1a1P11087 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
Col1a1P11087 Gm37965-201ENSMUST00000195304 1362 ntBASIC2.56□□□□□ -2
Col1a1P11087 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Col1a1P11087 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC2.55□□□□□ -2
Col1a1P11087 Mir592-201ENSMUST00000102113 96 ntBASIC2.55□□□□□ -2
Col1a1P11087 n-R5s52-201ENSMUST00000104614 113 ntBASIC2.55□□□□□ -2
Col1a1P11087 Gm14119-201ENSMUST00000119511 235 ntBASIC2.55□□□□□ -2
Col1a1P11087 Gm13419-201ENSMUST00000121711 271 ntBASIC2.55□□□□□ -2
Col1a1P11087 Gm3030-201ENSMUST00000163410 516 ntBASIC2.55□□□□□ -2
Col1a1P11087 Gm28975-201ENSMUST00000186412 686 ntBASIC2.55□□□□□ -2
Col1a1P11087 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC2.55□□□□□ -2
Col1a1P11087 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC2.55□□□□□ -2
Col1a1P11087 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC2.55□□□□□ -2
Col1a1P11087 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC2.55□□□□□ -2
Col1a1P11087 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC2.55□□□□□ -2
Col1a1P11087 Olfr971-201ENSMUST00000075467 924 ntAPPRIS P1 BASIC2.55□□□□□ -2
Col1a1P11087 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC2.55□□□□□ -2
Col1a1P11087 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Col1a1P11087 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
Col1a1P11087 Gm3940-201ENSMUST00000105087 432 ntBASIC2.54□□□□□ -2
Col1a1P11087 Gm23109-201ENSMUST00000116867 126 ntBASIC2.54□□□□□ -2
Col1a1P11087 Gm7974-201ENSMUST00000117154 408 ntBASIC2.54□□□□□ -2
Col1a1P11087 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC2.54□□□□□ -2
Col1a1P11087 Gm12935-201ENSMUST00000119352 246 ntBASIC2.54□□□□□ -2
Col1a1P11087 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC2.54□□□□□ -2
Col1a1P11087 Gm25883-201ENSMUST00000157781 271 ntBASIC2.54□□□□□ -2
Col1a1P11087 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC2.54□□□□□ -2
Col1a1P11087 Gm20542-201ENSMUST00000174582 372 ntBASIC2.54□□□□□ -2
Col1a1P11087 Gm27535-201ENSMUST00000183814 157 ntBASIC2.54□□□□□ -2
Col1a1P11087 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC2.54□□□□□ -2
Col1a1P11087 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC2.54□□□□□ -2
Col1a1P11087 Gm44181-201ENSMUST00000203106 483 ntBASIC2.54□□□□□ -2
Col1a1P11087 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC2.54□□□□□ -2
Col1a1P11087 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC2.54□□□□□ -2
Col1a1P11087 CT030662.1-201ENSMUST00000227380 232 ntBASIC2.54□□□□□ -2
Col1a1P11087 Gm23677-201ENSMUST00000083156 104 ntBASIC2.54□□□□□ -2
Col1a1P11087 Gm37903-201ENSMUST00000192122 2381 ntBASIC2.54□□□□□ -2
Col1a1P11087 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Col1a1P11087 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC2.54□□□□□ -2
Col1a1P11087 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
Col1a1P11087 Gm43326-201ENSMUST00000198459 1638 ntBASIC2.54□□□□□ -2
Col1a1P11087 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Col1a1P11087 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Col1a1P11087 Gm16294-201ENSMUST00000070382 1459 ntTSL 2 BASIC2.53□□□□□ -2
Col1a1P11087 Gm14579-201ENSMUST00000117068 283 ntBASIC2.53□□□□□ -2
Col1a1P11087 Gm14823-201ENSMUST00000117698 238 ntBASIC2.53□□□□□ -2
Col1a1P11087 Gm13771-201ENSMUST00000117988 238 ntBASIC2.53□□□□□ -2
Col1a1P11087 Fth-ps2-201ENSMUST00000168364 516 ntBASIC2.53□□□□□ -2
Col1a1P11087 Vmn1r-ps55-201ENSMUST00000174634 392 ntBASIC2.53□□□□□ -2
Col1a1P11087 Mir3106-201ENSMUST00000175401 82 ntBASIC2.53□□□□□ -2
Col1a1P11087 Gm27153-201ENSMUST00000184492 407 ntTSL 2 BASIC2.53□□□□□ -2
Col1a1P11087 Gm20776-201ENSMUST00000189940 700 ntBASIC2.53□□□□□ -2
Col1a1P11087 Gm37720-201ENSMUST00000195497 1241 ntBASIC2.53□□□□□ -2
Col1a1P11087 Mir1892-201ENSMUST00000197752 80 ntBASIC2.53□□□□□ -2
Col1a1P11087 Gm43841-201ENSMUST00000199491 586 ntBASIC2.53□□□□□ -2
Col1a1P11087 Gm18861-201ENSMUST00000202509 1186 ntBASIC2.53□□□□□ -2
Col1a1P11087 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Col1a1P11087 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC2.53□□□□□ -2
Col1a1P11087 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC2.53□□□□□ -2
Col1a1P11087 Gm16381-201ENSMUST00000220528 503 ntAPPRIS P1 BASIC2.53□□□□□ -2
Col1a1P11087 Gm2001-201ENSMUST00000223236 503 ntAPPRIS P1 BASIC2.53□□□□□ -2
Col1a1P11087 AC124549.2-201ENSMUST00000224243 222 ntBASIC2.53□□□□□ -2
Col1a1P11087 Olfr492-201ENSMUST00000079865 945 ntAPPRIS P1 BASIC2.53□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms