Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 AC159242.1-201ENSMUST00000225832 194 ntBASIC2.33□□□□□ -2.04
Col5a1O88207 CT025577.1-201ENSMUST00000220862 2846 ntBASIC2.33□□□□□ -2.04
Col5a1O88207 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.33□□□□□ -2.04
Col5a1O88207 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.33□□□□□ -2.04
Col5a1O88207 Mir344e-201ENSMUST00000104677 66 ntBASIC2.33□□□□□ -2.04
Col5a1O88207 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC2.33□□□□□ -2.04
Col5a1O88207 Gm26474-201ENSMUST00000116762 122 ntBASIC2.33□□□□□ -2.04
Col5a1O88207 Gm2288-201ENSMUST00000118560 638 ntBASIC2.33□□□□□ -2.04
Col5a1O88207 Gm14913-201ENSMUST00000120011 1093 ntBASIC2.33□□□□□ -2.04
Col5a1O88207 Gm15719-201ENSMUST00000120619 635 ntBASIC2.33□□□□□ -2.04
Col5a1O88207 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC2.33□□□□□ -2.04
Col5a1O88207 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC2.33□□□□□ -2.04
Col5a1O88207 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC2.33□□□□□ -2.04
Col5a1O88207 Gm16236-201ENSMUST00000159588 379 ntBASIC2.33□□□□□ -2.04
Col5a1O88207 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Col5a1O88207 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Col5a1O88207 Gm3852-201ENSMUST00000182781 264 ntBASIC2.33□□□□□ -2.04
Col5a1O88207 Gm19257-201ENSMUST00000186121 183 ntBASIC2.33□□□□□ -2.04
Col5a1O88207 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC2.33□□□□□ -2.04
Col5a1O88207 Mir3087-201ENSMUST00000199405 56 ntBASIC2.33□□□□□ -2.04
Col5a1O88207 Olfr165-203ENSMUST00000206410 1040 ntAPPRIS P2 BASIC2.33□□□□□ -2.04
Col5a1O88207 Gm3690-201ENSMUST00000211341 262 ntBASIC2.33□□□□□ -2.04
Col5a1O88207 AC122901.2-201ENSMUST00000216926 285 ntBASIC2.33□□□□□ -2.04
Col5a1O88207 Olfr589-202ENSMUST00000218483 966 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Col5a1O88207 AC126043.1-201ENSMUST00000221304 1141 ntBASIC2.33□□□□□ -2.04
Col5a1O88207 AC154329.2-201ENSMUST00000225257 383 ntBASIC2.33□□□□□ -2.04
Col5a1O88207 AC133654.1-201ENSMUST00000228411 672 ntBASIC2.33□□□□□ -2.04
Col5a1O88207 Olfr165-201ENSMUST00000052516 1040 ntAPPRIS ALT1 BASIC2.33□□□□□ -2.04
Col5a1O88207 Olfr589-201ENSMUST00000061055 954 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Col5a1O88207 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
Col5a1O88207 Esp31-201ENSMUST00000174742 1308 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Col5a1O88207 Gm6565-201ENSMUST00000121217 438 ntBASIC2.32□□□□□ -2.04
Col5a1O88207 Gm13555-201ENSMUST00000121668 319 ntBASIC2.32□□□□□ -2.04
Col5a1O88207 Gm13676-201ENSMUST00000122185 591 ntBASIC2.32□□□□□ -2.04
Col5a1O88207 Gm13868-201ENSMUST00000122411 294 ntBASIC2.32□□□□□ -2.04
Col5a1O88207 Gm25106-201ENSMUST00000122672 134 ntBASIC2.32□□□□□ -2.04
Col5a1O88207 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC2.32□□□□□ -2.04
Col5a1O88207 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC2.32□□□□□ -2.04
Col5a1O88207 Gm23585-201ENSMUST00000157656 102 ntBASIC2.32□□□□□ -2.04
Col5a1O88207 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Col5a1O88207 Gm23152-201ENSMUST00000175322 116 ntBASIC2.32□□□□□ -2.04
Col5a1O88207 Mir3106-201ENSMUST00000175401 82 ntBASIC2.32□□□□□ -2.04
Col5a1O88207 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Col5a1O88207 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Col5a1O88207 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC2.32□□□□□ -2.04
Col5a1O88207 Scoc-209ENSMUST00000212905 798 ntAPPRIS P3 TSL 3 BASIC2.32□□□□□ -2.04
Col5a1O88207 AC069561.4-201ENSMUST00000215291 572 ntAPPRIS P1 TSL 3 BASIC2.32□□□□□ -2.04
Col5a1O88207 AC079644.1-201ENSMUST00000220586 405 ntBASIC2.32□□□□□ -2.04
Col5a1O88207 AC137902.2-201ENSMUST00000227989 576 ntBASIC2.32□□□□□ -2.04
Col5a1O88207 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Col5a1O88207 Tas2r109-201ENSMUST00000067539 951 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Col5a1O88207 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Col5a1O88207 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Col5a1O88207 Ube2v2-201ENSMUST00000096234 609 ntTSL 3 BASIC2.32□□□□□ -2.04
Col5a1O88207 Gm18300-201ENSMUST00000192792 1406 ntBASIC2.32□□□□□ -2.04
Col5a1O88207 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.32□□□□□ -2.04
Col5a1O88207 Gm37158-201ENSMUST00000191652 5704 ntBASIC2.32□□□□□ -2.04
Col5a1O88207 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
Col5a1O88207 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Col5a1O88207 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Col5a1O88207 Gm38255-201ENSMUST00000194910 2996 ntBASIC2.31□□□□□ -2.04
Col5a1O88207 Gm14125-201ENSMUST00000113442 680 ntBASIC2.31□□□□□ -2.04
Col5a1O88207 Gm13349-201ENSMUST00000118436 411 ntBASIC2.31□□□□□ -2.04
Col5a1O88207 Gm11943-201ENSMUST00000119473 327 ntBASIC2.31□□□□□ -2.04
Col5a1O88207 Gm14301-201ENSMUST00000120181 324 ntBASIC2.31□□□□□ -2.04
Col5a1O88207 Gm14713-201ENSMUST00000122362 686 ntBASIC2.31□□□□□ -2.04
Col5a1O88207 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Col5a1O88207 Gm29513-201ENSMUST00000185741 202 ntBASIC2.31□□□□□ -2.04
Col5a1O88207 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC2.31□□□□□ -2.04
Col5a1O88207 Gm29552-201ENSMUST00000190548 660 ntBASIC2.31□□□□□ -2.04
Col5a1O88207 Gm28926-201ENSMUST00000191063 680 ntBASIC2.31□□□□□ -2.04
Col5a1O88207 Gm38214-201ENSMUST00000192581 988 ntBASIC2.31□□□□□ -2.04
Col5a1O88207 Gm37993-201ENSMUST00000195301 988 ntBASIC2.31□□□□□ -2.04
Col5a1O88207 Gm38268-201ENSMUST00000195813 193 ntBASIC2.31□□□□□ -2.04
Col5a1O88207 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC2.31□□□□□ -2.04
Col5a1O88207 Gm44954-201ENSMUST00000208513 227 ntBASIC2.31□□□□□ -2.04
Col5a1O88207 Olfr369-ps1-201ENSMUST00000212589 836 ntBASIC2.31□□□□□ -2.04
Col5a1O88207 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC2.31□□□□□ -2.04
Col5a1O88207 1700011B04Rik-211ENSMUST00000222690 394 ntTSL 5 BASIC2.31□□□□□ -2.04
Col5a1O88207 CT009733.1-203ENSMUST00000224033 451 ntBASIC2.31□□□□□ -2.04
Col5a1O88207 Mucl2-202ENSMUST00000226584 823 ntAPPRIS ALT2 BASIC2.31□□□□□ -2.04
Col5a1O88207 AC118639.1-201ENSMUST00000227204 338 ntBASIC2.31□□□□□ -2.04
Col5a1O88207 AC192088.2-201ENSMUST00000227590 411 ntBASIC2.31□□□□□ -2.04
Col5a1O88207 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Col5a1O88207 AC125374.3-201ENSMUST00000214983 2810 ntBASIC2.31□□□□□ -2.04
Col5a1O88207 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Col5a1O88207 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Col5a1O88207 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Col5a1O88207 Gm24340-201ENSMUST00000104208 97 ntBASIC2.31□□□□□ -2.04
Col5a1O88207 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Col5a1O88207 Gm13756-201ENSMUST00000117618 222 ntBASIC2.31□□□□□ -2.04
Col5a1O88207 Gm12492-201ENSMUST00000117665 564 ntBASIC2.31□□□□□ -2.04
Col5a1O88207 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC2.31□□□□□ -2.04
Col5a1O88207 Gm26001-201ENSMUST00000157989 103 ntBASIC2.31□□□□□ -2.04
Col5a1O88207 Gm24002-201ENSMUST00000158456 104 ntBASIC2.31□□□□□ -2.04
Col5a1O88207 Gm23702-201ENSMUST00000158840 130 ntBASIC2.31□□□□□ -2.04
Col5a1O88207 Gm7592-201ENSMUST00000160674 627 ntBASIC2.31□□□□□ -2.04
Col5a1O88207 Gm18415-201ENSMUST00000177464 647 ntBASIC2.31□□□□□ -2.04
Col5a1O88207 Gm27864-201ENSMUST00000183704 190 ntBASIC2.31□□□□□ -2.04
Col5a1O88207 Mir7225-201ENSMUST00000184178 54 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms