Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Gm43527-201ENSMUST00000198749 3178 ntBASIC4.02□□□□□ -1.77
Col13a1Q9R1N9 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
Col13a1Q9R1N9 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Col13a1Q9R1N9 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Col13a1Q9R1N9 Gm43696-201ENSMUST00000199385 6071 ntBASIC4.02□□□□□ -1.77
Col13a1Q9R1N9 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Col13a1Q9R1N9 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Col13a1Q9R1N9 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Col13a1Q9R1N9 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Col13a1Q9R1N9 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Col13a1Q9R1N9 Slfn8-201ENSMUST00000038141 4011 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Col13a1Q9R1N9 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
Col13a1Q9R1N9 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Col13a1Q9R1N9 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Col13a1Q9R1N9 Vmn2r51-201ENSMUST00000094863 2559 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Col13a1Q9R1N9 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Col13a1Q9R1N9 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Col13a1Q9R1N9 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Col13a1Q9R1N9 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Col13a1Q9R1N9 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC4.01□□□□□ -1.77
Col13a1Q9R1N9 Gm15101-201ENSMUST00000178818 1502 ntBASIC4.01□□□□□ -1.77
Col13a1Q9R1N9 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Col13a1Q9R1N9 Gm38265-201ENSMUST00000193479 3766 ntBASIC4.01□□□□□ -1.77
Col13a1Q9R1N9 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Col13a1Q9R1N9 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Col13a1Q9R1N9 Gm24124-201ENSMUST00000104103 132 ntBASIC4.01□□□□□ -1.77
Col13a1Q9R1N9 Gm23594-201ENSMUST00000104307 134 ntBASIC4.01□□□□□ -1.77
Col13a1Q9R1N9 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
Col13a1Q9R1N9 Rps19-ps7-201ENSMUST00000116122 438 ntBASIC4.01□□□□□ -1.77
Col13a1Q9R1N9 Gm12156-201ENSMUST00000119188 554 ntBASIC4.01□□□□□ -1.77
Col13a1Q9R1N9 Gm13932-201ENSMUST00000120873 610 ntBASIC4.01□□□□□ -1.77
Col13a1Q9R1N9 Gm14578-201ENSMUST00000122166 391 ntBASIC4.01□□□□□ -1.77
Col13a1Q9R1N9 Gm12711-201ENSMUST00000131249 340 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Col13a1Q9R1N9 Gm12226-201ENSMUST00000144172 876 ntBASIC4.01□□□□□ -1.77
Col13a1Q9R1N9 Gm24507-201ENSMUST00000157683 134 ntBASIC4.01□□□□□ -1.77
Col13a1Q9R1N9 Gm22637-201ENSMUST00000158144 283 ntBASIC4.01□□□□□ -1.77
Col13a1Q9R1N9 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Col13a1Q9R1N9 Gm26219-201ENSMUST00000175216 71 ntBASIC4.01□□□□□ -1.77
Col13a1Q9R1N9 Mir5099-201ENSMUST00000175257 74 ntBASIC4.01□□□□□ -1.77
Col13a1Q9R1N9 Gm23660-201ENSMUST00000178362 79 ntBASIC4.01□□□□□ -1.77
Col13a1Q9R1N9 Gm24088-201ENSMUST00000179100 79 ntBASIC4.01□□□□□ -1.77
Col13a1Q9R1N9 Gm24520-201ENSMUST00000179510 110 ntBASIC4.01□□□□□ -1.77
Col13a1Q9R1N9 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC4.01□□□□□ -1.77
Col13a1Q9R1N9 Gm29484-201ENSMUST00000186067 324 ntBASIC4.01□□□□□ -1.77
Col13a1Q9R1N9 Gm21088-201ENSMUST00000190875 316 ntBASIC4.01□□□□□ -1.77
Col13a1Q9R1N9 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Col13a1Q9R1N9 Gm37732-201ENSMUST00000194377 316 ntBASIC4.01□□□□□ -1.77
Col13a1Q9R1N9 Gm43510-201ENSMUST00000197922 353 ntBASIC4.01□□□□□ -1.77
Col13a1Q9R1N9 Gm42665-201ENSMUST00000202100 586 ntBASIC4.01□□□□□ -1.77
Col13a1Q9R1N9 Gm44261-201ENSMUST00000203337 209 ntBASIC4.01□□□□□ -1.77
Col13a1Q9R1N9 Gm44765-201ENSMUST00000206927 601 ntBASIC4.01□□□□□ -1.77
Col13a1Q9R1N9 Gm45539-201ENSMUST00000210313 428 ntBASIC4.01□□□□□ -1.77
Col13a1Q9R1N9 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC4.01□□□□□ -1.77
Col13a1Q9R1N9 AC158803.1-201ENSMUST00000219495 316 ntBASIC4.01□□□□□ -1.77
Col13a1Q9R1N9 Gm19326-201ENSMUST00000219818 326 ntBASIC4.01□□□□□ -1.77
Col13a1Q9R1N9 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Col13a1Q9R1N9 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Col13a1Q9R1N9 Olfr1192-ps1-201ENSMUST00000120518 2738 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Col13a1Q9R1N9 Olfr685-204ENSMUST00000217432 3246 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
Col13a1Q9R1N9 Olfr1057-202ENSMUST00000217435 3249 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Col13a1Q9R1N9 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Col13a1Q9R1N9 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Col13a1Q9R1N9 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Col13a1Q9R1N9 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Col13a1Q9R1N9 Gm43923-201ENSMUST00000203992 2911 ntBASIC4.01□□□□□ -1.77
Col13a1Q9R1N9 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Col13a1Q9R1N9 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Col13a1Q9R1N9 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Col13a1Q9R1N9 Gm13961-201ENSMUST00000119282 4772 ntBASIC4.01□□□□□ -1.77
Col13a1Q9R1N9 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Col13a1Q9R1N9 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC4□□□□□ -1.77
Col13a1Q9R1N9 Gm43896-201ENSMUST00000203440 2032 ntBASIC4□□□□□ -1.77
Col13a1Q9R1N9 Gm43913-201ENSMUST00000203924 3029 ntTSL 1 (best) BASIC4□□□□□ -1.77
Col13a1Q9R1N9 Gm43658-201ENSMUST00000202348 4176 ntBASIC4□□□□□ -1.77
Col13a1Q9R1N9 Olfr1312-203ENSMUST00000213961 5345 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Col13a1Q9R1N9 Gm43705-201ENSMUST00000195958 3717 ntBASIC4□□□□□ -1.77
Col13a1Q9R1N9 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Col13a1Q9R1N9 Gm20515-201ENSMUST00000174440 4824 ntTSL 1 (best) BASIC4□□□□□ -1.77
Col13a1Q9R1N9 Gm42616-201ENSMUST00000198989 4184 ntBASIC4□□□□□ -1.77
Col13a1Q9R1N9 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC4□□□□□ -1.77
Col13a1Q9R1N9 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Col13a1Q9R1N9 Gm14823-201ENSMUST00000117698 238 ntBASIC4□□□□□ -1.77
Col13a1Q9R1N9 Gm11577-201ENSMUST00000118030 737 ntBASIC4□□□□□ -1.77
Col13a1Q9R1N9 Gm11742-201ENSMUST00000119903 233 ntBASIC4□□□□□ -1.77
Col13a1Q9R1N9 Gm14619-201ENSMUST00000120480 168 ntBASIC4□□□□□ -1.77
Col13a1Q9R1N9 Gm15799-201ENSMUST00000120899 289 ntBASIC4□□□□□ -1.77
Col13a1Q9R1N9 Gm11849-201ENSMUST00000121293 261 ntBASIC4□□□□□ -1.77
Col13a1Q9R1N9 Gm15381-201ENSMUST00000121501 1156 ntBASIC4□□□□□ -1.77
Col13a1Q9R1N9 Gm15147-201ENSMUST00000122263 483 ntBASIC4□□□□□ -1.77
Col13a1Q9R1N9 Gm22073-201ENSMUST00000122668 189 ntBASIC4□□□□□ -1.77
Col13a1Q9R1N9 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Col13a1Q9R1N9 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC4□□□□□ -1.77
Col13a1Q9R1N9 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC4□□□□□ -1.77
Col13a1Q9R1N9 Gm22792-201ENSMUST00000157225 133 ntBASIC4□□□□□ -1.77
Col13a1Q9R1N9 Gm25907-201ENSMUST00000158486 125 ntBASIC4□□□□□ -1.77
Col13a1Q9R1N9 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC4□□□□□ -1.77
Col13a1Q9R1N9 Gm17159-201ENSMUST00000169043 482 ntBASIC4□□□□□ -1.77
Col13a1Q9R1N9 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC4□□□□□ -1.77
Col13a1Q9R1N9 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC4□□□□□ -1.77
Col13a1Q9R1N9 Gm27805-201ENSMUST00000184513 79 ntBASIC4□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 93.4 ms