Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
RTRAFQ9CQE8 Gm14448-201ENSMUST00000116383 210 ntBASIC2.34□□□□□ -2.03
RTRAFQ9CQE8 Gm16431-201ENSMUST00000117454 431 ntBASIC2.34□□□□□ -2.03
RTRAFQ9CQE8 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC2.34□□□□□ -2.03
RTRAFQ9CQE8 Gm9308-201ENSMUST00000119073 448 ntBASIC2.34□□□□□ -2.03
RTRAFQ9CQE8 Gm15060-201ENSMUST00000119550 948 ntBASIC2.34□□□□□ -2.03
RTRAFQ9CQE8 Gm6762-201ENSMUST00000121769 289 ntBASIC2.34□□□□□ -2.03
RTRAFQ9CQE8 Gm23887-201ENSMUST00000122683 172 ntBASIC2.34□□□□□ -2.03
RTRAFQ9CQE8 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC2.34□□□□□ -2.03
RTRAFQ9CQE8 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
RTRAFQ9CQE8 Gm14257-201ENSMUST00000144649 765 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
RTRAFQ9CQE8 Gm23409-201ENSMUST00000158516 237 ntBASIC2.34□□□□□ -2.03
RTRAFQ9CQE8 Gm17065-201ENSMUST00000165245 239 ntBASIC2.34□□□□□ -2.03
RTRAFQ9CQE8 Gm17038-201ENSMUST00000166586 494 ntBASIC2.34□□□□□ -2.03
RTRAFQ9CQE8 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
RTRAFQ9CQE8 Gm24080-201ENSMUST00000175178 232 ntBASIC2.34□□□□□ -2.03
RTRAFQ9CQE8 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC2.34□□□□□ -2.03
RTRAFQ9CQE8 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
RTRAFQ9CQE8 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
RTRAFQ9CQE8 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
RTRAFQ9CQE8 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
RTRAFQ9CQE8 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
RTRAFQ9CQE8 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC2.34□□□□□ -2.03
RTRAFQ9CQE8 Gm44476-201ENSMUST00000196225 91 ntBASIC2.34□□□□□ -2.03
RTRAFQ9CQE8 Gm18597-201ENSMUST00000209519 694 ntBASIC2.34□□□□□ -2.03
RTRAFQ9CQE8 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC2.34□□□□□ -2.03
RTRAFQ9CQE8 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
RTRAFQ9CQE8 Gm7119-201ENSMUST00000221345 695 ntBASIC2.34□□□□□ -2.03
RTRAFQ9CQE8 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC2.34□□□□□ -2.03
RTRAFQ9CQE8 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC2.34□□□□□ -2.03
RTRAFQ9CQE8 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.03
RTRAFQ9CQE8 Gm23847-201ENSMUST00000083829 110 ntBASIC2.34□□□□□ -2.03
RTRAFQ9CQE8 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC2.34□□□□□ -2.03
RTRAFQ9CQE8 Gm4855-201ENSMUST00000192270 1967 ntBASIC2.34□□□□□ -2.04
RTRAFQ9CQE8 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
RTRAFQ9CQE8 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC2.33□□□□□ -2.04
RTRAFQ9CQE8 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
RTRAFQ9CQE8 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
RTRAFQ9CQE8 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC2.33□□□□□ -2.04
RTRAFQ9CQE8 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
RTRAFQ9CQE8 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
RTRAFQ9CQE8 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
RTRAFQ9CQE8 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC2.33□□□□□ -2.04
RTRAFQ9CQE8 Gm2007-203ENSMUST00000189494 1494 ntTSL 5 BASIC2.33□□□□□ -2.04
RTRAFQ9CQE8 Gm14910-201ENSMUST00000121037 1805 ntBASIC2.33□□□□□ -2.04
RTRAFQ9CQE8 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
RTRAFQ9CQE8 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
RTRAFQ9CQE8 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
RTRAFQ9CQE8 Gm15159-201ENSMUST00000117062 764 ntBASIC2.33□□□□□ -2.04
RTRAFQ9CQE8 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC2.33□□□□□ -2.04
RTRAFQ9CQE8 Gm13349-201ENSMUST00000118436 411 ntBASIC2.33□□□□□ -2.04
RTRAFQ9CQE8 Mup-ps13-201ENSMUST00000120662 545 ntBASIC2.33□□□□□ -2.04
RTRAFQ9CQE8 Mup-ps1-201ENSMUST00000120720 544 ntBASIC2.33□□□□□ -2.04
RTRAFQ9CQE8 Gm14841-201ENSMUST00000121067 758 ntBASIC2.33□□□□□ -2.04
RTRAFQ9CQE8 Gm14979-201ENSMUST00000121561 1035 ntBASIC2.33□□□□□ -2.04
RTRAFQ9CQE8 Gm12095-201ENSMUST00000121962 816 ntBASIC2.33□□□□□ -2.04
RTRAFQ9CQE8 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
RTRAFQ9CQE8 Gm7209-201ENSMUST00000122339 333 ntBASIC2.33□□□□□ -2.04
RTRAFQ9CQE8 Mup-ps4-201ENSMUST00000151005 539 ntBASIC2.33□□□□□ -2.04
RTRAFQ9CQE8 Gm26099-201ENSMUST00000157248 109 ntBASIC2.33□□□□□ -2.04
RTRAFQ9CQE8 Gm22330-201ENSMUST00000158068 115 ntBASIC2.33□□□□□ -2.04
RTRAFQ9CQE8 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC2.33□□□□□ -2.04
RTRAFQ9CQE8 Snord53-201ENSMUST00000175146 78 ntBASIC2.33□□□□□ -2.04
RTRAFQ9CQE8 Gm18397-201ENSMUST00000176704 587 ntBASIC2.33□□□□□ -2.04
RTRAFQ9CQE8 Ang-ps2-201ENSMUST00000178173 433 ntBASIC2.33□□□□□ -2.04
RTRAFQ9CQE8 Mup-ps7-201ENSMUST00000178292 545 ntBASIC2.33□□□□□ -2.04
RTRAFQ9CQE8 Mup-ps8-201ENSMUST00000178663 545 ntBASIC2.33□□□□□ -2.04
RTRAFQ9CQE8 Mup-ps9-201ENSMUST00000178847 545 ntBASIC2.33□□□□□ -2.04
RTRAFQ9CQE8 Gm21893-201ENSMUST00000179119 397 ntBASIC2.33□□□□□ -2.04
RTRAFQ9CQE8 Mup-ps6-201ENSMUST00000179564 545 ntBASIC2.33□□□□□ -2.04
RTRAFQ9CQE8 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC2.33□□□□□ -2.04
RTRAFQ9CQE8 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC2.33□□□□□ -2.04
RTRAFQ9CQE8 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
RTRAFQ9CQE8 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
RTRAFQ9CQE8 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC2.33□□□□□ -2.04
RTRAFQ9CQE8 Gm45048-201ENSMUST00000207058 429 ntBASIC2.33□□□□□ -2.04
RTRAFQ9CQE8 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
RTRAFQ9CQE8 Gm19219-201ENSMUST00000215863 724 ntBASIC2.33□□□□□ -2.04
RTRAFQ9CQE8 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC2.33□□□□□ -2.04
RTRAFQ9CQE8 Gm19786-201ENSMUST00000222589 580 ntBASIC2.33□□□□□ -2.04
RTRAFQ9CQE8 CT025157.1-201ENSMUST00000226241 292 ntBASIC2.33□□□□□ -2.04
RTRAFQ9CQE8 AC121898.1-201ENSMUST00000227599 288 ntBASIC2.33□□□□□ -2.04
RTRAFQ9CQE8 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC2.33□□□□□ -2.04
RTRAFQ9CQE8 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
RTRAFQ9CQE8 Gm26437-201ENSMUST00000082595 105 ntBASIC2.33□□□□□ -2.04
RTRAFQ9CQE8 Gm23452-201ENSMUST00000083327 107 ntBASIC2.33□□□□□ -2.04
RTRAFQ9CQE8 n-R5s85-201ENSMUST00000083453 113 ntBASIC2.33□□□□□ -2.04
RTRAFQ9CQE8 Mir184-201ENSMUST00000083662 69 ntBASIC2.33□□□□□ -2.04
RTRAFQ9CQE8 Gm21286-201ENSMUST00000098035 545 ntBASIC2.33□□□□□ -2.04
RTRAFQ9CQE8 Olfr1040-201ENSMUST00000099909 942 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
RTRAFQ9CQE8 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
RTRAFQ9CQE8 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
RTRAFQ9CQE8 AC154511.1-201ENSMUST00000222578 1587 ntBASIC2.32□□□□□ -2.04
RTRAFQ9CQE8 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC2.32□□□□□ -2.04
RTRAFQ9CQE8 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
RTRAFQ9CQE8 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC2.32□□□□□ -2.04
RTRAFQ9CQE8 Gm22272-201ENSMUST00000104039 134 ntBASIC2.32□□□□□ -2.04
RTRAFQ9CQE8 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.32□□□□□ -2.04
RTRAFQ9CQE8 Zfp965-201ENSMUST00000109002 957 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
RTRAFQ9CQE8 Gm13731-201ENSMUST00000117332 196 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 96.3 ms