Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm43300-201ENSMUST00000198540 2043 ntBASIC2.83□□□□□ -1.96
Use1Q9CQ56 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
Use1Q9CQ56 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Use1Q9CQ56 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Use1Q9CQ56 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Use1Q9CQ56 Gm14825-201ENSMUST00000113538 701 ntBASIC2.82□□□□□ -1.96
Use1Q9CQ56 Gm22072-201ENSMUST00000116850 121 ntBASIC2.82□□□□□ -1.96
Use1Q9CQ56 Gm11829-201ENSMUST00000121003 282 ntBASIC2.82□□□□□ -1.96
Use1Q9CQ56 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC2.82□□□□□ -1.96
Use1Q9CQ56 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC2.82□□□□□ -1.96
Use1Q9CQ56 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Use1Q9CQ56 Gm17186-201ENSMUST00000171742 456 ntBASIC2.82□□□□□ -1.96
Use1Q9CQ56 Gm20672-201ENSMUST00000176605 261 ntBASIC2.82□□□□□ -1.96
Use1Q9CQ56 Mir6383-201ENSMUST00000184545 116 ntBASIC2.82□□□□□ -1.96
Use1Q9CQ56 Gm29104-201ENSMUST00000186304 222 ntBASIC2.82□□□□□ -1.96
Use1Q9CQ56 Gm7135-201ENSMUST00000187538 675 ntTSL 3 BASIC2.82□□□□□ -1.96
Use1Q9CQ56 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC2.82□□□□□ -1.96
Use1Q9CQ56 Gm29553-201ENSMUST00000189692 279 ntBASIC2.82□□□□□ -1.96
Use1Q9CQ56 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC2.82□□□□□ -1.96
Use1Q9CQ56 Gm18551-201ENSMUST00000195594 642 ntBASIC2.82□□□□□ -1.96
Use1Q9CQ56 Gm43541-201ENSMUST00000197208 581 ntBASIC2.82□□□□□ -1.96
Use1Q9CQ56 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC2.82□□□□□ -1.96
Use1Q9CQ56 Gm43224-201ENSMUST00000201567 898 ntBASIC2.82□□□□□ -1.96
Use1Q9CQ56 Gm7624-201ENSMUST00000209702 435 ntBASIC2.82□□□□□ -1.96
Use1Q9CQ56 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC2.82□□□□□ -1.96
Use1Q9CQ56 AC174797.3-202ENSMUST00000224578 587 ntBASIC2.82□□□□□ -1.96
Use1Q9CQ56 AC158142.2-201ENSMUST00000227892 635 ntBASIC2.82□□□□□ -1.96
Use1Q9CQ56 Gm9845-201ENSMUST00000056409 598 ntBASIC2.82□□□□□ -1.96
Use1Q9CQ56 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Use1Q9CQ56 Gm25856-201ENSMUST00000082786 75 ntBASIC2.82□□□□□ -1.96
Use1Q9CQ56 Gm23939-201ENSMUST00000082880 133 ntBASIC2.82□□□□□ -1.96
Use1Q9CQ56 Gm22043-201ENSMUST00000082993 158 ntBASIC2.82□□□□□ -1.96
Use1Q9CQ56 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Use1Q9CQ56 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC2.82□□□□□ -1.96
Use1Q9CQ56 Gm29730-201ENSMUST00000192986 1396 ntBASIC2.82□□□□□ -1.96
Use1Q9CQ56 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
Use1Q9CQ56 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Use1Q9CQ56 Gm23609-201ENSMUST00000104542 127 ntBASIC2.81□□□□□ -1.96
Use1Q9CQ56 Gm15120-201ENSMUST00000120602 301 ntBASIC2.81□□□□□ -1.96
Use1Q9CQ56 Gm15190-201ENSMUST00000120855 276 ntBASIC2.81□□□□□ -1.96
Use1Q9CQ56 Gm14804-201ENSMUST00000122322 508 ntBASIC2.81□□□□□ -1.96
Use1Q9CQ56 Gm22956-201ENSMUST00000122520 80 ntBASIC2.81□□□□□ -1.96
Use1Q9CQ56 Usp46os1-201ENSMUST00000129275 508 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Use1Q9CQ56 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC2.81□□□□□ -1.96
Use1Q9CQ56 Gm26277-201ENSMUST00000157097 152 ntBASIC2.81□□□□□ -1.96
Use1Q9CQ56 Gm15946-201ENSMUST00000160654 423 ntBASIC2.81□□□□□ -1.96
Use1Q9CQ56 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC2.81□□□□□ -1.96
Use1Q9CQ56 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC2.81□□□□□ -1.96
Use1Q9CQ56 Gm26297-201ENSMUST00000179464 132 ntBASIC2.81□□□□□ -1.96
Use1Q9CQ56 Gm5798-202ENSMUST00000179987 582 ntTSL 3 BASIC2.81□□□□□ -1.96
Use1Q9CQ56 Gm24969-201ENSMUST00000180331 79 ntBASIC2.81□□□□□ -1.96
Use1Q9CQ56 Gm27527-201ENSMUST00000183903 99 ntBASIC2.81□□□□□ -1.96
Use1Q9CQ56 Gm18956-201ENSMUST00000192857 480 ntBASIC2.81□□□□□ -1.96
Use1Q9CQ56 Gm37002-201ENSMUST00000194560 373 ntBASIC2.81□□□□□ -1.96
Use1Q9CQ56 Gm42818-201ENSMUST00000198869 987 ntBASIC2.81□□□□□ -1.96
Use1Q9CQ56 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC2.81□□□□□ -1.96
Use1Q9CQ56 Gm18410-201ENSMUST00000207199 577 ntBASIC2.81□□□□□ -1.96
Use1Q9CQ56 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC2.81□□□□□ -1.96
Use1Q9CQ56 Gm4921-201ENSMUST00000219804 992 ntBASIC2.81□□□□□ -1.96
Use1Q9CQ56 AC159188.1-201ENSMUST00000225198 526 ntBASIC2.81□□□□□ -1.96
Use1Q9CQ56 AC116656.1-201ENSMUST00000227040 755 ntBASIC2.81□□□□□ -1.96
Use1Q9CQ56 n-R5s85-201ENSMUST00000083453 113 ntBASIC2.81□□□□□ -1.96
Use1Q9CQ56 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC2.81□□□□□ -1.96
Use1Q9CQ56 AC153526.2-201ENSMUST00000218206 2031 ntBASIC2.81□□□□□ -1.96
Use1Q9CQ56 Gm37515-201ENSMUST00000193321 3817 ntBASIC2.8□□□□□ -1.96
Use1Q9CQ56 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Use1Q9CQ56 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC2.8□□□□□ -1.96
Use1Q9CQ56 Gm37999-201ENSMUST00000195178 1809 ntBASIC2.8□□□□□ -1.96
Use1Q9CQ56 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Use1Q9CQ56 Gm7171-201ENSMUST00000177413 1349 ntBASIC2.8□□□□□ -1.96
Use1Q9CQ56 Gm23577-201ENSMUST00000103950 110 ntBASIC2.8□□□□□ -1.96
Use1Q9CQ56 Gm24119-201ENSMUST00000103979 246 ntBASIC2.8□□□□□ -1.96
Use1Q9CQ56 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC2.8□□□□□ -1.96
Use1Q9CQ56 Gm5937-201ENSMUST00000119715 643 ntBASIC2.8□□□□□ -1.96
Use1Q9CQ56 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC2.8□□□□□ -1.96
Use1Q9CQ56 Gm9001-201ENSMUST00000121642 399 ntBASIC2.8□□□□□ -1.96
Use1Q9CQ56 Gm26349-201ENSMUST00000157530 130 ntBASIC2.8□□□□□ -1.96
Use1Q9CQ56 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Use1Q9CQ56 Gm22307-201ENSMUST00000180019 107 ntBASIC2.8□□□□□ -1.96
Use1Q9CQ56 Gm28650-201ENSMUST00000188413 411 ntBASIC2.8□□□□□ -1.96
Use1Q9CQ56 Gm30341-201ENSMUST00000194363 289 ntBASIC2.8□□□□□ -1.96
Use1Q9CQ56 Gm43043-201ENSMUST00000196579 412 ntBASIC2.8□□□□□ -1.96
Use1Q9CQ56 Gm44332-201ENSMUST00000203712 433 ntBASIC2.8□□□□□ -1.96
Use1Q9CQ56 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC2.8□□□□□ -1.96
Use1Q9CQ56 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Use1Q9CQ56 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC2.8□□□□□ -1.96
Use1Q9CQ56 CT571256.1-201ENSMUST00000226045 585 ntBASIC2.8□□□□□ -1.96
Use1Q9CQ56 AC118639.1-204ENSMUST00000226401 694 ntBASIC2.8□□□□□ -1.96
Use1Q9CQ56 AC125523.1-201ENSMUST00000228018 934 ntBASIC2.8□□□□□ -1.96
Use1Q9CQ56 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Use1Q9CQ56 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Use1Q9CQ56 Gm25202-201ENSMUST00000082838 191 ntBASIC2.8□□□□□ -1.96
Use1Q9CQ56 Mir184-201ENSMUST00000083662 69 ntBASIC2.8□□□□□ -1.96
Use1Q9CQ56 Gm10780-201ENSMUST00000099459 285 ntBASIC2.8□□□□□ -1.96
Use1Q9CQ56 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Use1Q9CQ56 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC2.8□□□□□ -1.96
Use1Q9CQ56 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Use1Q9CQ56 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
Use1Q9CQ56 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Use1Q9CQ56 AC104897.1-201ENSMUST00000222638 3628 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms