Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm23310-201ENSMUST00000179105 79 ntBASIC5.18□□□□□ -1.58
Clp1Q99LI9 Gm25461-201ENSMUST00000179293 79 ntBASIC5.18□□□□□ -1.58
Clp1Q99LI9 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC5.18□□□□□ -1.58
Clp1Q99LI9 Gm38053-201ENSMUST00000193938 160 ntBASIC5.18□□□□□ -1.58
Clp1Q99LI9 Gm18453-201ENSMUST00000208000 626 ntBASIC5.18□□□□□ -1.58
Clp1Q99LI9 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Clp1Q99LI9 Gm45498-201ENSMUST00000210346 283 ntBASIC5.18□□□□□ -1.58
Clp1Q99LI9 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC5.18□□□□□ -1.58
Clp1Q99LI9 AC130821.1-201ENSMUST00000221997 293 ntBASIC5.18□□□□□ -1.58
Clp1Q99LI9 Olfr453-201ENSMUST00000053647 954 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Clp1Q99LI9 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Clp1Q99LI9 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC5.18□□□□□ -1.58
Clp1Q99LI9 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Clp1Q99LI9 Gm8744-201ENSMUST00000204475 3581 ntBASIC5.18□□□□□ -1.58
Clp1Q99LI9 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Clp1Q99LI9 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
Clp1Q99LI9 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Clp1Q99LI9 Olfr586-204ENSMUST00000215304 6169 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Clp1Q99LI9 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
Clp1Q99LI9 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Clp1Q99LI9 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Clp1Q99LI9 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Clp1Q99LI9 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Clp1Q99LI9 A830019P07Rik-201ENSMUST00000178904 1777 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Clp1Q99LI9 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC5.17□□□□□ -1.58
Clp1Q99LI9 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Clp1Q99LI9 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Clp1Q99LI9 Olfr78-201ENSMUST00000060187 3410 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Clp1Q99LI9 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Clp1Q99LI9 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Clp1Q99LI9 Gm6274-201ENSMUST00000118173 797 ntBASIC5.17□□□□□ -1.58
Clp1Q99LI9 Gm13876-201ENSMUST00000118451 261 ntBASIC5.17□□□□□ -1.58
Clp1Q99LI9 Gm15796-201ENSMUST00000162135 204 ntBASIC5.17□□□□□ -1.58
Clp1Q99LI9 Gm17062-201ENSMUST00000166987 461 ntBASIC5.17□□□□□ -1.58
Clp1Q99LI9 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
Clp1Q99LI9 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC5.17□□□□□ -1.58
Clp1Q99LI9 Gm37492-201ENSMUST00000191948 376 ntBASIC5.17□□□□□ -1.58
Clp1Q99LI9 Gm38011-201ENSMUST00000193312 279 ntBASIC5.17□□□□□ -1.58
Clp1Q99LI9 Gm42832-201ENSMUST00000196361 745 ntBASIC5.17□□□□□ -1.58
Clp1Q99LI9 Gm43441-201ENSMUST00000201458 205 ntBASIC5.17□□□□□ -1.58
Clp1Q99LI9 Gm44446-201ENSMUST00000204864 255 ntBASIC5.17□□□□□ -1.58
Clp1Q99LI9 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Clp1Q99LI9 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Clp1Q99LI9 Olfr830-201ENSMUST00000078861 948 ntAPPRIS P2 BASIC5.17□□□□□ -1.58
Clp1Q99LI9 Gm5248-201ENSMUST00000186108 4046 ntBASIC5.17□□□□□ -1.58
Clp1Q99LI9 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
Clp1Q99LI9 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
Clp1Q99LI9 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Clp1Q99LI9 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Clp1Q99LI9 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Clp1Q99LI9 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC5.17□□□□□ -1.58
Clp1Q99LI9 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
Clp1Q99LI9 Pof1b-201ENSMUST00000039887 3886 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Clp1Q99LI9 Spag5-201ENSMUST00000045026 3887 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Clp1Q99LI9 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Clp1Q99LI9 Dazl-201ENSMUST00000010736 2942 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Clp1Q99LI9 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Clp1Q99LI9 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Clp1Q99LI9 Ak9-201ENSMUST00000173494 6968 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Clp1Q99LI9 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Clp1Q99LI9 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Clp1Q99LI9 AC115910.1-201ENSMUST00000221188 4275 ntBASIC5.16□□□□□ -1.58
Clp1Q99LI9 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Clp1Q99LI9 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Clp1Q99LI9 Gm37357-201ENSMUST00000192386 3123 ntBASIC5.16□□□□□ -1.58
Clp1Q99LI9 Mir687-201ENSMUST00000102166 89 ntBASIC5.16□□□□□ -1.58
Clp1Q99LI9 Mir761-201ENSMUST00000103245 76 ntBASIC5.16□□□□□ -1.58
Clp1Q99LI9 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC5.16□□□□□ -1.58
Clp1Q99LI9 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC5.16□□□□□ -1.58
Clp1Q99LI9 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC5.16□□□□□ -1.58
Clp1Q99LI9 Gm12191-201ENSMUST00000118307 348 ntBASIC5.16□□□□□ -1.58
Clp1Q99LI9 Gm9703-201ENSMUST00000119573 343 ntBASIC5.16□□□□□ -1.58
Clp1Q99LI9 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC5.16□□□□□ -1.58
Clp1Q99LI9 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC5.16□□□□□ -1.58
Clp1Q99LI9 Gm13232-201ENSMUST00000121816 632 ntBASIC5.16□□□□□ -1.58
Clp1Q99LI9 Gm24251-201ENSMUST00000157324 114 ntBASIC5.16□□□□□ -1.58
Clp1Q99LI9 Gm24729-201ENSMUST00000158225 137 ntBASIC5.16□□□□□ -1.58
Clp1Q99LI9 Gm25923-201ENSMUST00000158312 138 ntBASIC5.16□□□□□ -1.58
Clp1Q99LI9 Gm22326-201ENSMUST00000158897 351 ntBASIC5.16□□□□□ -1.58
Clp1Q99LI9 Gm23415-201ENSMUST00000175519 83 ntBASIC5.16□□□□□ -1.58
Clp1Q99LI9 Gm27402-201ENSMUST00000183890 120 ntBASIC5.16□□□□□ -1.58
Clp1Q99LI9 Mir3620-201ENSMUST00000184710 61 ntBASIC5.16□□□□□ -1.58
Clp1Q99LI9 Gm27414-201ENSMUST00000185033 381 ntBASIC5.16□□□□□ -1.58
Clp1Q99LI9 Gm4322-201ENSMUST00000191094 336 ntBASIC5.16□□□□□ -1.58
Clp1Q99LI9 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC5.16□□□□□ -1.58
Clp1Q99LI9 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC5.16□□□□□ -1.58
Clp1Q99LI9 Gm45007-201ENSMUST00000206237 366 ntBASIC5.16□□□□□ -1.58
Clp1Q99LI9 AC192616.2-201ENSMUST00000221482 3841 ntBASIC5.16□□□□□ -1.58
Clp1Q99LI9 AC154552.1-201ENSMUST00000222969 202 ntBASIC5.16□□□□□ -1.58
Clp1Q99LI9 CT025536.1-201ENSMUST00000226744 844 ntBASIC5.16□□□□□ -1.58
Clp1Q99LI9 AC126440.1-201ENSMUST00000227098 349 ntBASIC5.16□□□□□ -1.58
Clp1Q99LI9 AC074315.1-201ENSMUST00000228801 214 ntBASIC5.16□□□□□ -1.58
Clp1Q99LI9 Olfr1467-201ENSMUST00000054687 927 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Clp1Q99LI9 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC5.16□□□□□ -1.58
Clp1Q99LI9 Gm24166-201ENSMUST00000082724 135 ntBASIC5.16□□□□□ -1.58
Clp1Q99LI9 Gm10343-201ENSMUST00000096279 348 ntBASIC5.16□□□□□ -1.58
Clp1Q99LI9 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Clp1Q99LI9 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Clp1Q99LI9 Olfr1311-202ENSMUST00000213602 2631 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Clp1Q99LI9 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 10.1 ms