Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Gm15125-201ENSMUST00000116185 800 ntBASIC3.2□□□□□ -1.9
Cstf1Q99LC2 Gm14879-201ENSMUST00000117308 507 ntBASIC3.2□□□□□ -1.9
Cstf1Q99LC2 Gm9119-201ENSMUST00000118866 495 ntBASIC3.2□□□□□ -1.9
Cstf1Q99LC2 Gm13228-201ENSMUST00000118937 634 ntBASIC3.2□□□□□ -1.9
Cstf1Q99LC2 Gm12137-201ENSMUST00000119565 346 ntBASIC3.2□□□□□ -1.9
Cstf1Q99LC2 Gm15142-201ENSMUST00000121013 856 ntBASIC3.2□□□□□ -1.9
Cstf1Q99LC2 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC3.2□□□□□ -1.9
Cstf1Q99LC2 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Cstf1Q99LC2 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC3.2□□□□□ -1.9
Cstf1Q99LC2 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC3.2□□□□□ -1.9
Cstf1Q99LC2 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Cstf1Q99LC2 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC3.2□□□□□ -1.9
Cstf1Q99LC2 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC3.2□□□□□ -1.9
Cstf1Q99LC2 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Cstf1Q99LC2 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC3.2□□□□□ -1.9
Cstf1Q99LC2 Gm9023-201ENSMUST00000198408 1038 ntBASIC3.2□□□□□ -1.9
Cstf1Q99LC2 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.2□□□□□ -1.9
Cstf1Q99LC2 AC154552.4-201ENSMUST00000222171 151 ntBASIC3.2□□□□□ -1.9
Cstf1Q99LC2 AC164100.1-201ENSMUST00000227214 508 ntBASIC3.2□□□□□ -1.9
Cstf1Q99LC2 AC147545.1-201ENSMUST00000227528 108 ntBASIC3.2□□□□□ -1.9
Cstf1Q99LC2 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Cstf1Q99LC2 Gm4945-201ENSMUST00000075152 453 ntBASIC3.2□□□□□ -1.9
Cstf1Q99LC2 Mir350-201ENSMUST00000083639 99 ntBASIC3.2□□□□□ -1.9
Cstf1Q99LC2 Gm42534-201ENSMUST00000196063 1754 ntBASIC3.2□□□□□ -1.9
Cstf1Q99LC2 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Cstf1Q99LC2 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Cstf1Q99LC2 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.19□□□□□ -1.9
Cstf1Q99LC2 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Cstf1Q99LC2 Gm38699-201ENSMUST00000221301 1740 ntBASIC3.19□□□□□ -1.9
Cstf1Q99LC2 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Cstf1Q99LC2 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Cstf1Q99LC2 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Cstf1Q99LC2 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
Cstf1Q99LC2 Gm10488-201ENSMUST00000101657 874 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Cstf1Q99LC2 Mir344c-201ENSMUST00000103919 92 ntBASIC3.19□□□□□ -1.9
Cstf1Q99LC2 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Cstf1Q99LC2 Gm8569-201ENSMUST00000117630 647 ntBASIC3.19□□□□□ -1.9
Cstf1Q99LC2 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC3.19□□□□□ -1.9
Cstf1Q99LC2 Gm16445-201ENSMUST00000120399 714 ntBASIC3.19□□□□□ -1.9
Cstf1Q99LC2 Gm13692-201ENSMUST00000120774 371 ntBASIC3.19□□□□□ -1.9
Cstf1Q99LC2 Gm9001-201ENSMUST00000121642 399 ntBASIC3.19□□□□□ -1.9
Cstf1Q99LC2 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Cstf1Q99LC2 Gm24780-201ENSMUST00000157635 143 ntBASIC3.19□□□□□ -1.9
Cstf1Q99LC2 Gm24681-201ENSMUST00000158760 107 ntBASIC3.19□□□□□ -1.9
Cstf1Q99LC2 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Cstf1Q99LC2 Gm25198-201ENSMUST00000178574 110 ntBASIC3.19□□□□□ -1.9
Cstf1Q99LC2 Gm4836-201ENSMUST00000179874 907 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Cstf1Q99LC2 Gm10096-202ENSMUST00000180207 907 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Cstf1Q99LC2 Gm10487-202ENSMUST00000180344 907 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Cstf1Q99LC2 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC3.19□□□□□ -1.9
Cstf1Q99LC2 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC3.19□□□□□ -1.9
Cstf1Q99LC2 Gm29460-201ENSMUST00000188607 714 ntBASIC3.19□□□□□ -1.9
Cstf1Q99LC2 Trbv7-201ENSMUST00000193339 402 ntBASIC3.19□□□□□ -1.9
Cstf1Q99LC2 Ighv1-40-201ENSMUST00000194231 345 ntBASIC3.19□□□□□ -1.9
Cstf1Q99LC2 Gm43096-201ENSMUST00000196173 421 ntBASIC3.19□□□□□ -1.9
Cstf1Q99LC2 Gm43979-201ENSMUST00000203179 475 ntBASIC3.19□□□□□ -1.9
Cstf1Q99LC2 Gm44266-201ENSMUST00000205235 500 ntBASIC3.19□□□□□ -1.9
Cstf1Q99LC2 Gm45814-201ENSMUST00000212646 775 ntBASIC3.19□□□□□ -1.9
Cstf1Q99LC2 CT030161.1-201ENSMUST00000218411 124 ntBASIC3.19□□□□□ -1.9
Cstf1Q99LC2 D830005E20Rik-202ENSMUST00000219691 971 ntTSL 5 BASIC3.19□□□□□ -1.9
Cstf1Q99LC2 AC154424.1-201ENSMUST00000225883 799 ntBASIC3.19□□□□□ -1.9
Cstf1Q99LC2 CT030684.2-201ENSMUST00000228946 826 ntBASIC3.19□□□□□ -1.9
Cstf1Q99LC2 Gm10058-201ENSMUST00000079797 893 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Cstf1Q99LC2 Gm23452-201ENSMUST00000083327 107 ntBASIC3.19□□□□□ -1.9
Cstf1Q99LC2 Snord7-201ENSMUST00000083781 97 ntBASIC3.19□□□□□ -1.9
Cstf1Q99LC2 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Cstf1Q99LC2 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Cstf1Q99LC2 Gm37868-201ENSMUST00000195578 2735 ntBASIC3.19□□□□□ -1.9
Cstf1Q99LC2 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Cstf1Q99LC2 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
Cstf1Q99LC2 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Cstf1Q99LC2 Gm45263-201ENSMUST00000210377 1375 ntBASIC3.18□□□□□ -1.9
Cstf1Q99LC2 Mir667-201ENSMUST00000102441 92 ntBASIC3.18□□□□□ -1.9
Cstf1Q99LC2 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC3.18□□□□□ -1.9
Cstf1Q99LC2 Gm12803-201ENSMUST00000118907 821 ntBASIC3.18□□□□□ -1.9
Cstf1Q99LC2 Gm11693-201ENSMUST00000119625 565 ntBASIC3.18□□□□□ -1.9
Cstf1Q99LC2 Gm11252-201ENSMUST00000120572 939 ntBASIC3.18□□□□□ -1.9
Cstf1Q99LC2 Gm13194-201ENSMUST00000142299 311 ntBASIC3.18□□□□□ -1.9
Cstf1Q99LC2 Mup-ps4-201ENSMUST00000151005 539 ntBASIC3.18□□□□□ -1.9
Cstf1Q99LC2 Gm25883-201ENSMUST00000157781 271 ntBASIC3.18□□□□□ -1.9
Cstf1Q99LC2 Gm22516-201ENSMUST00000158266 124 ntBASIC3.18□□□□□ -1.9
Cstf1Q99LC2 Gm16569-201ENSMUST00000160526 314 ntBASIC3.18□□□□□ -1.9
Cstf1Q99LC2 Gm17117-201ENSMUST00000163665 299 ntBASIC3.18□□□□□ -1.9
Cstf1Q99LC2 Gm25026-201ENSMUST00000175017 188 ntBASIC3.18□□□□□ -1.9
Cstf1Q99LC2 Gm24080-201ENSMUST00000175178 232 ntBASIC3.18□□□□□ -1.9
Cstf1Q99LC2 Mup-ps7-201ENSMUST00000178292 545 ntBASIC3.18□□□□□ -1.9
Cstf1Q99LC2 Mup-ps8-201ENSMUST00000178663 545 ntBASIC3.18□□□□□ -1.9
Cstf1Q99LC2 Mup-ps9-201ENSMUST00000178847 545 ntBASIC3.18□□□□□ -1.9
Cstf1Q99LC2 Mup-ps6-201ENSMUST00000179564 545 ntBASIC3.18□□□□□ -1.9
Cstf1Q99LC2 Gm23963-201ENSMUST00000179603 77 ntBASIC3.18□□□□□ -1.9
Cstf1Q99LC2 Gm27505-201ENSMUST00000185071 110 ntBASIC3.18□□□□□ -1.9
Cstf1Q99LC2 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC3.18□□□□□ -1.9
Cstf1Q99LC2 Igkv9-128-201ENSMUST00000196602 353 ntBASIC3.18□□□□□ -1.9
Cstf1Q99LC2 Gm45427-201ENSMUST00000209572 1253 ntBASIC3.18□□□□□ -1.9
Cstf1Q99LC2 AC107808.2-201ENSMUST00000213542 1027 ntTSL 5 BASIC3.18□□□□□ -1.9
Cstf1Q99LC2 CT573422.1-201ENSMUST00000216655 405 ntBASIC3.18□□□□□ -1.9
Cstf1Q99LC2 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
Cstf1Q99LC2 Zmym2-202ENSMUST00000223669 1281 ntBASIC3.18□□□□□ -1.9
Cstf1Q99LC2 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Cstf1Q99LC2 CT572983.1-201ENSMUST00000226895 514 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 101.8 ms