Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm37878-201ENSMUST00000192108 387 ntBASIC4.47□□□□□ -1.69
Ccdc9Q8VC31 Gm17906-201ENSMUST00000202480 901 ntBASIC4.47□□□□□ -1.69
Ccdc9Q8VC31 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC4.47□□□□□ -1.69
Ccdc9Q8VC31 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC4.47□□□□□ -1.69
Ccdc9Q8VC31 Gm7948-201ENSMUST00000212607 844 ntBASIC4.47□□□□□ -1.69
Ccdc9Q8VC31 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC4.47□□□□□ -1.69
Ccdc9Q8VC31 AC134468.2-201ENSMUST00000222549 672 ntBASIC4.47□□□□□ -1.69
Ccdc9Q8VC31 AC109172.2-201ENSMUST00000228792 381 ntBASIC4.47□□□□□ -1.69
Ccdc9Q8VC31 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Ccdc9Q8VC31 Gm25403-201ENSMUST00000082971 143 ntBASIC4.47□□□□□ -1.69
Ccdc9Q8VC31 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Ccdc9Q8VC31 P2ry10-202ENSMUST00000118666 2757 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Ccdc9Q8VC31 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Ccdc9Q8VC31 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
Ccdc9Q8VC31 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC4.46□□□□□ -1.69
Ccdc9Q8VC31 Gm43715-201ENSMUST00000196307 2715 ntBASIC4.46□□□□□ -1.69
Ccdc9Q8VC31 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Ccdc9Q8VC31 Gm37645-201ENSMUST00000194285 3556 ntBASIC4.46□□□□□ -1.7
Ccdc9Q8VC31 Gm23942-201ENSMUST00000101956 107 ntBASIC4.46□□□□□ -1.7
Ccdc9Q8VC31 Gm24788-201ENSMUST00000104283 156 ntBASIC4.46□□□□□ -1.7
Ccdc9Q8VC31 Sult2a5-201ENSMUST00000108525 1046 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Ccdc9Q8VC31 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
Ccdc9Q8VC31 Gm16216-201ENSMUST00000118970 1111 ntBASIC4.46□□□□□ -1.7
Ccdc9Q8VC31 Gm15060-201ENSMUST00000119550 948 ntBASIC4.46□□□□□ -1.7
Ccdc9Q8VC31 Gm12739-201ENSMUST00000119769 382 ntBASIC4.46□□□□□ -1.7
Ccdc9Q8VC31 Olfr336-ps1-201ENSMUST00000120897 940 ntBASIC4.46□□□□□ -1.7
Ccdc9Q8VC31 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Ccdc9Q8VC31 Gm15860-202ENSMUST00000137257 506 ntTSL 3 BASIC4.46□□□□□ -1.7
Ccdc9Q8VC31 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC4.46□□□□□ -1.7
Ccdc9Q8VC31 Gm22434-201ENSMUST00000158549 122 ntBASIC4.46□□□□□ -1.7
Ccdc9Q8VC31 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC4.46□□□□□ -1.7
Ccdc9Q8VC31 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Ccdc9Q8VC31 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC4.46□□□□□ -1.7
Ccdc9Q8VC31 Gm25198-201ENSMUST00000178574 110 ntBASIC4.46□□□□□ -1.7
Ccdc9Q8VC31 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Ccdc9Q8VC31 Gm27414-201ENSMUST00000185033 381 ntBASIC4.46□□□□□ -1.7
Ccdc9Q8VC31 Gm29228-201ENSMUST00000185489 418 ntBASIC4.46□□□□□ -1.7
Ccdc9Q8VC31 Gm29216-201ENSMUST00000187117 492 ntBASIC4.46□□□□□ -1.7
Ccdc9Q8VC31 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Ccdc9Q8VC31 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC4.46□□□□□ -1.7
Ccdc9Q8VC31 Gm37353-201ENSMUST00000194497 313 ntBASIC4.46□□□□□ -1.7
Ccdc9Q8VC31 Ighv1-68-201ENSMUST00000198789 294 ntBASIC4.46□□□□□ -1.7
Ccdc9Q8VC31 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC4.46□□□□□ -1.7
Ccdc9Q8VC31 Gm44076-201ENSMUST00000203072 520 ntBASIC4.46□□□□□ -1.7
Ccdc9Q8VC31 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Ccdc9Q8VC31 CT030161.1-201ENSMUST00000218411 124 ntBASIC4.46□□□□□ -1.7
Ccdc9Q8VC31 CT009713.9-201ENSMUST00000223604 389 ntBASIC4.46□□□□□ -1.7
Ccdc9Q8VC31 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC4.46□□□□□ -1.7
Ccdc9Q8VC31 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Ccdc9Q8VC31 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Ccdc9Q8VC31 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Ccdc9Q8VC31 Olfr506-201ENSMUST00000077343 1008 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Ccdc9Q8VC31 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Ccdc9Q8VC31 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC4.46□□□□□ -1.7
Ccdc9Q8VC31 n-R5s7-201ENSMUST00000083755 121 ntBASIC4.46□□□□□ -1.7
Ccdc9Q8VC31 Gm25004-201ENSMUST00000083811 161 ntBASIC4.46□□□□□ -1.7
Ccdc9Q8VC31 Gm44434-201ENSMUST00000203918 3745 ntBASIC4.46□□□□□ -1.7
Ccdc9Q8VC31 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Ccdc9Q8VC31 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
Ccdc9Q8VC31 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
Ccdc9Q8VC31 Gm14537-201ENSMUST00000117464 599 ntBASIC4.45□□□□□ -1.7
Ccdc9Q8VC31 Gm12492-201ENSMUST00000117665 564 ntBASIC4.45□□□□□ -1.7
Ccdc9Q8VC31 Gm14600-201ENSMUST00000121032 630 ntBASIC4.45□□□□□ -1.7
Ccdc9Q8VC31 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC4.45□□□□□ -1.7
Ccdc9Q8VC31 Gm14530-201ENSMUST00000122391 333 ntBASIC4.45□□□□□ -1.7
Ccdc9Q8VC31 Gm9785-202ENSMUST00000144563 593 ntBASIC4.45□□□□□ -1.7
Ccdc9Q8VC31 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Ccdc9Q8VC31 Gm25559-201ENSMUST00000157182 74 ntBASIC4.45□□□□□ -1.7
Ccdc9Q8VC31 Gm23905-201ENSMUST00000157568 109 ntBASIC4.45□□□□□ -1.7
Ccdc9Q8VC31 Gm24014-201ENSMUST00000157728 157 ntBASIC4.45□□□□□ -1.7
Ccdc9Q8VC31 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC4.45□□□□□ -1.7
Ccdc9Q8VC31 Gm26556-201ENSMUST00000180645 320 ntBASIC4.45□□□□□ -1.7
Ccdc9Q8VC31 Gm28008-201ENSMUST00000184021 186 ntBASIC4.45□□□□□ -1.7
Ccdc9Q8VC31 Mir6391-201ENSMUST00000184391 104 ntBASIC4.45□□□□□ -1.7
Ccdc9Q8VC31 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC4.45□□□□□ -1.7
Ccdc9Q8VC31 Gm28191-201ENSMUST00000189112 211 ntBASIC4.45□□□□□ -1.7
Ccdc9Q8VC31 Gm29334-201ENSMUST00000190334 357 ntBASIC4.45□□□□□ -1.7
Ccdc9Q8VC31 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC4.45□□□□□ -1.7
Ccdc9Q8VC31 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Ccdc9Q8VC31 Gm45209-201ENSMUST00000207122 353 ntBASIC4.45□□□□□ -1.7
Ccdc9Q8VC31 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Ccdc9Q8VC31 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC4.45□□□□□ -1.7
Ccdc9Q8VC31 AC073947.3-201ENSMUST00000215576 766 ntBASIC4.45□□□□□ -1.7
Ccdc9Q8VC31 Gm7198-201ENSMUST00000219635 1074 ntBASIC4.45□□□□□ -1.7
Ccdc9Q8VC31 CR974429.1-201ENSMUST00000220877 827 ntBASIC4.45□□□□□ -1.7
Ccdc9Q8VC31 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC4.45□□□□□ -1.7
Ccdc9Q8VC31 CT009733.1-201ENSMUST00000225322 425 ntBASIC4.45□□□□□ -1.7
Ccdc9Q8VC31 CT025602.1-201ENSMUST00000227281 382 ntBASIC4.45□□□□□ -1.7
Ccdc9Q8VC31 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
Ccdc9Q8VC31 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Ccdc9Q8VC31 Gm24921-201ENSMUST00000083024 107 ntBASIC4.45□□□□□ -1.7
Ccdc9Q8VC31 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Ccdc9Q8VC31 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Ccdc9Q8VC31 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
Ccdc9Q8VC31 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC4.45□□□□□ -1.7
Ccdc9Q8VC31 Gm37402-201ENSMUST00000194525 5000 ntBASIC4.45□□□□□ -1.7
Ccdc9Q8VC31 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Ccdc9Q8VC31 Olfr849-202ENSMUST00000217273 6140 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Ccdc9Q8VC31 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Ccdc9Q8VC31 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC4.44□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 94.2 ms