Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 AC129202.3-201ENSMUST00000224413 733 ntBASIC4.61□□□□□ -1.67
Ushbp1Q8R370 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Ushbp1Q8R370 Tas2r110-201ENSMUST00000082014 1002 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Ushbp1Q8R370 Gm23423-201ENSMUST00000082782 106 ntBASIC4.61□□□□□ -1.67
Ushbp1Q8R370 Mir28a-201ENSMUST00000083560 86 ntBASIC4.61□□□□□ -1.67
Ushbp1Q8R370 AC134596.1-201ENSMUST00000222016 1922 ntBASIC4.61□□□□□ -1.67
Ushbp1Q8R370 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Ushbp1Q8R370 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Ushbp1Q8R370 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Ushbp1Q8R370 AC167420.1-201ENSMUST00000222999 2121 ntBASIC4.61□□□□□ -1.67
Ushbp1Q8R370 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
Ushbp1Q8R370 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
Ushbp1Q8R370 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
Ushbp1Q8R370 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Ushbp1Q8R370 Gm43047-201ENSMUST00000200089 3460 ntBASIC4.6□□□□□ -1.67
Ushbp1Q8R370 Gm24273-201ENSMUST00000102332 164 ntBASIC4.6□□□□□ -1.67
Ushbp1Q8R370 Gm24581-201ENSMUST00000103962 133 ntBASIC4.6□□□□□ -1.67
Ushbp1Q8R370 Gm24608-201ENSMUST00000104381 136 ntBASIC4.6□□□□□ -1.67
Ushbp1Q8R370 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC4.6□□□□□ -1.67
Ushbp1Q8R370 Gm14566-201ENSMUST00000118915 321 ntBASIC4.6□□□□□ -1.67
Ushbp1Q8R370 Gm14240-201ENSMUST00000120353 546 ntBASIC4.6□□□□□ -1.67
Ushbp1Q8R370 Gm11254-201ENSMUST00000122368 653 ntBASIC4.6□□□□□ -1.67
Ushbp1Q8R370 Gm25177-201ENSMUST00000122634 117 ntBASIC4.6□□□□□ -1.67
Ushbp1Q8R370 Gm23585-201ENSMUST00000157656 102 ntBASIC4.6□□□□□ -1.67
Ushbp1Q8R370 Gm27773-201ENSMUST00000184087 78 ntBASIC4.6□□□□□ -1.67
Ushbp1Q8R370 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC4.6□□□□□ -1.67
Ushbp1Q8R370 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Ushbp1Q8R370 Gm43814-201ENSMUST00000197851 413 ntBASIC4.6□□□□□ -1.67
Ushbp1Q8R370 Gm42475-201ENSMUST00000201212 295 ntBASIC4.6□□□□□ -1.67
Ushbp1Q8R370 Gm2676-201ENSMUST00000207279 606 ntBASIC4.6□□□□□ -1.67
Ushbp1Q8R370 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC4.6□□□□□ -1.67
Ushbp1Q8R370 AC116589.3-202ENSMUST00000221770 649 ntBASIC4.6□□□□□ -1.67
Ushbp1Q8R370 AC116589.6-201ENSMUST00000222252 649 ntBASIC4.6□□□□□ -1.67
Ushbp1Q8R370 Gm18441-201ENSMUST00000223539 617 ntBASIC4.6□□□□□ -1.67
Ushbp1Q8R370 AC144628.2-201ENSMUST00000227374 352 ntBASIC4.6□□□□□ -1.67
Ushbp1Q8R370 Olfr873-202ENSMUST00000075717 991 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
Ushbp1Q8R370 Gm25008-201ENSMUST00000083809 81 ntBASIC4.6□□□□□ -1.67
Ushbp1Q8R370 Gm26111-201ENSMUST00000083969 106 ntBASIC4.6□□□□□ -1.67
Ushbp1Q8R370 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
Ushbp1Q8R370 Gm37011-201ENSMUST00000195543 2935 ntBASIC4.6□□□□□ -1.67
Ushbp1Q8R370 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Ushbp1Q8R370 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
Ushbp1Q8R370 Gm26853-201ENSMUST00000180757 4010 ntTSL 5 BASIC4.6□□□□□ -1.67
Ushbp1Q8R370 Gm3616-201ENSMUST00000174430 2514 ntBASIC4.6□□□□□ -1.67
Ushbp1Q8R370 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Ushbp1Q8R370 Olfr145-202ENSMUST00000213688 6691 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Ushbp1Q8R370 Mir599-201ENSMUST00000102378 88 ntBASIC4.59□□□□□ -1.67
Ushbp1Q8R370 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
Ushbp1Q8R370 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Ushbp1Q8R370 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Ushbp1Q8R370 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Ushbp1Q8R370 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC4.59□□□□□ -1.67
Ushbp1Q8R370 Klhl13-205ENSMUST00000115319 3349 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
Ushbp1Q8R370 Gm13804-201ENSMUST00000119552 172 ntBASIC4.59□□□□□ -1.67
Ushbp1Q8R370 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Ushbp1Q8R370 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Ushbp1Q8R370 Gm15899-201ENSMUST00000128586 238 ntBASIC4.59□□□□□ -1.67
Ushbp1Q8R370 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Ushbp1Q8R370 Gm23782-201ENSMUST00000157939 120 ntBASIC4.59□□□□□ -1.67
Ushbp1Q8R370 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Ushbp1Q8R370 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Ushbp1Q8R370 Gm22631-201ENSMUST00000179656 94 ntBASIC4.59□□□□□ -1.67
Ushbp1Q8R370 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC4.59□□□□□ -1.67
Ushbp1Q8R370 Gm26960-201ENSMUST00000182263 412 ntBASIC4.59□□□□□ -1.67
Ushbp1Q8R370 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC4.59□□□□□ -1.67
Ushbp1Q8R370 Gm2007-203ENSMUST00000189494 1494 ntTSL 5 BASIC4.59□□□□□ -1.67
Ushbp1Q8R370 Gm43652-201ENSMUST00000196219 675 ntBASIC4.59□□□□□ -1.67
Ushbp1Q8R370 Gm4248-201ENSMUST00000196905 316 ntBASIC4.59□□□□□ -1.67
Ushbp1Q8R370 Gm43855-201ENSMUST00000197462 507 ntBASIC4.59□□□□□ -1.67
Ushbp1Q8R370 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Ushbp1Q8R370 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC4.59□□□□□ -1.67
Ushbp1Q8R370 AC152062.1-201ENSMUST00000218129 386 ntBASIC4.59□□□□□ -1.67
Ushbp1Q8R370 AC115750.1-201ENSMUST00000220441 567 ntBASIC4.59□□□□□ -1.67
Ushbp1Q8R370 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Ushbp1Q8R370 CT571268.1-201ENSMUST00000222320 407 ntBASIC4.59□□□□□ -1.67
Ushbp1Q8R370 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Ushbp1Q8R370 Gm25475-201ENSMUST00000082825 180 ntBASIC4.59□□□□□ -1.67
Ushbp1Q8R370 Gm23093-201ENSMUST00000083450 102 ntBASIC4.59□□□□□ -1.67
Ushbp1Q8R370 Abca5-201ENSMUST00000043961 8231 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Ushbp1Q8R370 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC4.59□□□□□ -1.68
Ushbp1Q8R370 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
Ushbp1Q8R370 BC051076-202ENSMUST00000199477 2868 ntBASIC4.59□□□□□ -1.68
Ushbp1Q8R370 Gm45093-201ENSMUST00000206859 2463 ntBASIC4.58□□□□□ -1.68
Ushbp1Q8R370 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Ushbp1Q8R370 Gm37879-201ENSMUST00000193112 1995 ntBASIC4.58□□□□□ -1.68
Ushbp1Q8R370 Gm37630-201ENSMUST00000194210 1456 ntBASIC4.58□□□□□ -1.68
Ushbp1Q8R370 Gm15773-201ENSMUST00000118665 1448 ntBASIC4.58□□□□□ -1.68
Ushbp1Q8R370 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Ushbp1Q8R370 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Ushbp1Q8R370 Gm14541-201ENSMUST00000118985 157 ntBASIC4.58□□□□□ -1.68
Ushbp1Q8R370 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC4.58□□□□□ -1.68
Ushbp1Q8R370 Gm14586-201ENSMUST00000119571 408 ntBASIC4.58□□□□□ -1.68
Ushbp1Q8R370 Gm7071-201ENSMUST00000120458 462 ntBASIC4.58□□□□□ -1.68
Ushbp1Q8R370 Defa-ps13-201ENSMUST00000120695 204 ntBASIC4.58□□□□□ -1.68
Ushbp1Q8R370 Defa-ps5-201ENSMUST00000121541 279 ntBASIC4.58□□□□□ -1.68
Ushbp1Q8R370 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC4.58□□□□□ -1.68
Ushbp1Q8R370 Gm22563-201ENSMUST00000157333 269 ntBASIC4.58□□□□□ -1.68
Ushbp1Q8R370 Gm26348-201ENSMUST00000157528 240 ntBASIC4.58□□□□□ -1.68
Ushbp1Q8R370 Gm23098-201ENSMUST00000157552 299 ntBASIC4.58□□□□□ -1.68
Ushbp1Q8R370 Gm26402-201ENSMUST00000158499 113 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 87.9 ms