Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm18423-201ENSMUST00000205144 1074 ntBASIC3.34□□□□□ -1.87
Ccdc28bQ8CEG5 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC3.34□□□□□ -1.87
Ccdc28bQ8CEG5 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC3.34□□□□□ -1.87
Ccdc28bQ8CEG5 Gm44852-201ENSMUST00000207950 369 ntBASIC3.34□□□□□ -1.87
Ccdc28bQ8CEG5 Gm33091-201ENSMUST00000217798 748 ntTSL 3 BASIC3.34□□□□□ -1.87
Ccdc28bQ8CEG5 AC115750.1-201ENSMUST00000220441 567 ntBASIC3.34□□□□□ -1.87
Ccdc28bQ8CEG5 AC126673.2-201ENSMUST00000221052 686 ntBASIC3.34□□□□□ -1.87
Ccdc28bQ8CEG5 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC3.34□□□□□ -1.87
Ccdc28bQ8CEG5 AC138667.2-201ENSMUST00000224880 598 ntBASIC3.34□□□□□ -1.87
Ccdc28bQ8CEG5 AC154598.1-201ENSMUST00000227079 347 ntBASIC3.34□□□□□ -1.87
Ccdc28bQ8CEG5 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Ccdc28bQ8CEG5 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Ccdc28bQ8CEG5 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Ccdc28bQ8CEG5 Gm37598-201ENSMUST00000194506 1301 ntBASIC3.34□□□□□ -1.87
Ccdc28bQ8CEG5 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Ccdc28bQ8CEG5 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Ccdc28bQ8CEG5 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC3.34□□□□□ -1.88
Ccdc28bQ8CEG5 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Ccdc28bQ8CEG5 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
Ccdc28bQ8CEG5 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Ccdc28bQ8CEG5 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Ccdc28bQ8CEG5 Olfr353-203ENSMUST00000217215 4173 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Ccdc28bQ8CEG5 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
Ccdc28bQ8CEG5 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Ccdc28bQ8CEG5 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
Ccdc28bQ8CEG5 Gm15176-201ENSMUST00000117734 135 ntBASIC3.33□□□□□ -1.88
Ccdc28bQ8CEG5 Gm12722-201ENSMUST00000118507 493 ntBASIC3.33□□□□□ -1.88
Ccdc28bQ8CEG5 Gm5942-201ENSMUST00000120046 439 ntBASIC3.33□□□□□ -1.88
Ccdc28bQ8CEG5 Gm13692-201ENSMUST00000120774 371 ntBASIC3.33□□□□□ -1.88
Ccdc28bQ8CEG5 Gm14577-201ENSMUST00000121134 256 ntBASIC3.33□□□□□ -1.88
Ccdc28bQ8CEG5 Gm12770-201ENSMUST00000121734 462 ntBASIC3.33□□□□□ -1.88
Ccdc28bQ8CEG5 Gm24910-201ENSMUST00000157289 272 ntBASIC3.33□□□□□ -1.88
Ccdc28bQ8CEG5 Gm23666-201ENSMUST00000158053 116 ntBASIC3.33□□□□□ -1.88
Ccdc28bQ8CEG5 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Ccdc28bQ8CEG5 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Ccdc28bQ8CEG5 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC3.33□□□□□ -1.88
Ccdc28bQ8CEG5 Gm27875-201ENSMUST00000184425 123 ntBASIC3.33□□□□□ -1.88
Ccdc28bQ8CEG5 Gm28002-201ENSMUST00000184832 100 ntBASIC3.33□□□□□ -1.88
Ccdc28bQ8CEG5 Gm28390-201ENSMUST00000185212 700 ntBASIC3.33□□□□□ -1.88
Ccdc28bQ8CEG5 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC3.33□□□□□ -1.88
Ccdc28bQ8CEG5 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC3.33□□□□□ -1.88
Ccdc28bQ8CEG5 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Ccdc28bQ8CEG5 Gm6680-201ENSMUST00000192789 950 ntBASIC3.33□□□□□ -1.88
Ccdc28bQ8CEG5 Gm32447-201ENSMUST00000194265 697 ntBASIC3.33□□□□□ -1.88
Ccdc28bQ8CEG5 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC3.33□□□□□ -1.88
Ccdc28bQ8CEG5 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC3.33□□□□□ -1.88
Ccdc28bQ8CEG5 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC3.33□□□□□ -1.88
Ccdc28bQ8CEG5 Olfr512-202ENSMUST00000209620 1056 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Ccdc28bQ8CEG5 Gm7786-201ENSMUST00000210494 436 ntBASIC3.33□□□□□ -1.88
Ccdc28bQ8CEG5 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC3.33□□□□□ -1.88
Ccdc28bQ8CEG5 Gm18228-201ENSMUST00000217297 1091 ntBASIC3.33□□□□□ -1.88
Ccdc28bQ8CEG5 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Ccdc28bQ8CEG5 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Ccdc28bQ8CEG5 AC109214.2-201ENSMUST00000220089 358 ntBASIC3.33□□□□□ -1.88
Ccdc28bQ8CEG5 AC154358.1-201ENSMUST00000224871 218 ntBASIC3.33□□□□□ -1.88
Ccdc28bQ8CEG5 CT025603.4-201ENSMUST00000225777 413 ntBASIC3.33□□□□□ -1.88
Ccdc28bQ8CEG5 CT030662.1-201ENSMUST00000227380 232 ntBASIC3.33□□□□□ -1.88
Ccdc28bQ8CEG5 AC139845.2-201ENSMUST00000227504 436 ntBASIC3.33□□□□□ -1.88
Ccdc28bQ8CEG5 AC107453.2-201ENSMUST00000227714 655 ntBASIC3.33□□□□□ -1.88
Ccdc28bQ8CEG5 Olfr512-201ENSMUST00000074730 1056 ntBASIC3.33□□□□□ -1.88
Ccdc28bQ8CEG5 Gm26439-201ENSMUST00000082592 106 ntBASIC3.33□□□□□ -1.88
Ccdc28bQ8CEG5 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
Ccdc28bQ8CEG5 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
Ccdc28bQ8CEG5 Gm29730-201ENSMUST00000192986 1396 ntBASIC3.33□□□□□ -1.88
Ccdc28bQ8CEG5 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
Ccdc28bQ8CEG5 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Ccdc28bQ8CEG5 Gm14404-201ENSMUST00000119117 1660 ntBASIC3.33□□□□□ -1.88
Ccdc28bQ8CEG5 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
Ccdc28bQ8CEG5 Gm43404-201ENSMUST00000200424 2534 ntBASIC3.32□□□□□ -1.88
Ccdc28bQ8CEG5 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Ccdc28bQ8CEG5 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Ccdc28bQ8CEG5 Gm12805-201ENSMUST00000117305 1048 ntBASIC3.32□□□□□ -1.88
Ccdc28bQ8CEG5 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Ccdc28bQ8CEG5 Gm15399-201ENSMUST00000118055 724 ntBASIC3.32□□□□□ -1.88
Ccdc28bQ8CEG5 Gm8260-201ENSMUST00000119230 353 ntBASIC3.32□□□□□ -1.88
Ccdc28bQ8CEG5 Gm7219-201ENSMUST00000119619 297 ntBASIC3.32□□□□□ -1.88
Ccdc28bQ8CEG5 Gm11704-201ENSMUST00000120031 214 ntBASIC3.32□□□□□ -1.88
Ccdc28bQ8CEG5 Gm11506-201ENSMUST00000122414 470 ntBASIC3.32□□□□□ -1.88
Ccdc28bQ8CEG5 n-R5s68-201ENSMUST00000122639 82 ntBASIC3.32□□□□□ -1.88
Ccdc28bQ8CEG5 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC3.32□□□□□ -1.88
Ccdc28bQ8CEG5 Gm22733-201ENSMUST00000158094 91 ntBASIC3.32□□□□□ -1.88
Ccdc28bQ8CEG5 Gm23352-201ENSMUST00000158428 64 ntBASIC3.32□□□□□ -1.88
Ccdc28bQ8CEG5 Gm9593-201ENSMUST00000166034 469 ntBASIC3.32□□□□□ -1.88
Ccdc28bQ8CEG5 Gm19203-201ENSMUST00000174049 939 ntBASIC3.32□□□□□ -1.88
Ccdc28bQ8CEG5 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC3.32□□□□□ -1.88
Ccdc28bQ8CEG5 Mir6971-201ENSMUST00000183497 63 ntBASIC3.32□□□□□ -1.88
Ccdc28bQ8CEG5 Gm29950-201ENSMUST00000195273 237 ntBASIC3.32□□□□□ -1.88
Ccdc28bQ8CEG5 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Ccdc28bQ8CEG5 Gm3189-201ENSMUST00000205595 832 ntBASIC3.32□□□□□ -1.88
Ccdc28bQ8CEG5 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC3.32□□□□□ -1.88
Ccdc28bQ8CEG5 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC3.32□□□□□ -1.88
Ccdc28bQ8CEG5 Gm19032-201ENSMUST00000208584 592 ntBASIC3.32□□□□□ -1.88
Ccdc28bQ8CEG5 AC156952.1-201ENSMUST00000220361 793 ntBASIC3.32□□□□□ -1.88
Ccdc28bQ8CEG5 CT030184.1-201ENSMUST00000222393 416 ntBASIC3.32□□□□□ -1.88
Ccdc28bQ8CEG5 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC3.32□□□□□ -1.88
Ccdc28bQ8CEG5 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Ccdc28bQ8CEG5 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC3.32□□□□□ -1.88
Ccdc28bQ8CEG5 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Ccdc28bQ8CEG5 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Ccdc28bQ8CEG5 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 87.5 ms