Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm25537-201ENSMUST00000103851 109 ntBASIC5.56□□□□□ -1.52
Trim47Q8C0E3 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim47Q8C0E3 Gm15670-201ENSMUST00000117740 447 ntBASIC5.56□□□□□ -1.52
Trim47Q8C0E3 Gm11600-201ENSMUST00000119592 240 ntBASIC5.56□□□□□ -1.52
Trim47Q8C0E3 Gm6574-201ENSMUST00000120037 362 ntBASIC5.56□□□□□ -1.52
Trim47Q8C0E3 Gm11398-201ENSMUST00000120330 320 ntBASIC5.56□□□□□ -1.52
Trim47Q8C0E3 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
Trim47Q8C0E3 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim47Q8C0E3 Gm20257-202ENSMUST00000188643 130 ntBASIC5.56□□□□□ -1.52
Trim47Q8C0E3 Gm29065-201ENSMUST00000188786 487 ntTSL 3 BASIC5.56□□□□□ -1.52
Trim47Q8C0E3 Ighv1-6-201ENSMUST00000193849 293 ntBASIC5.56□□□□□ -1.52
Trim47Q8C0E3 Gm42663-201ENSMUST00000199883 351 ntBASIC5.56□□□□□ -1.52
Trim47Q8C0E3 Gm29781-201ENSMUST00000203862 478 ntBASIC5.56□□□□□ -1.52
Trim47Q8C0E3 Gm45083-201ENSMUST00000205216 712 ntTSL 3 BASIC5.56□□□□□ -1.52
Trim47Q8C0E3 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC5.56□□□□□ -1.52
Trim47Q8C0E3 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC5.56□□□□□ -1.52
Trim47Q8C0E3 AC152979.1-201ENSMUST00000218214 289 ntBASIC5.56□□□□□ -1.52
Trim47Q8C0E3 AC124182.1-201ENSMUST00000227091 321 ntBASIC5.56□□□□□ -1.52
Trim47Q8C0E3 Mir17-201ENSMUST00000083574 84 ntBASIC5.56□□□□□ -1.52
Trim47Q8C0E3 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
Trim47Q8C0E3 Olfr129-202ENSMUST00000216476 5275 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
Trim47Q8C0E3 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim47Q8C0E3 Adgb-206ENSMUST00000208717 4902 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Trim47Q8C0E3 Zc4h2-203ENSMUST00000120620 2156 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Trim47Q8C0E3 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim47Q8C0E3 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC5.56□□□□□ -1.52
Trim47Q8C0E3 Olfr911-ps1-202ENSMUST00000216496 3576 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Trim47Q8C0E3 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Trim47Q8C0E3 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
Trim47Q8C0E3 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Trim47Q8C0E3 AC102847.2-201ENSMUST00000227799 2906 ntBASIC5.55□□□□□ -1.52
Trim47Q8C0E3 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
Trim47Q8C0E3 Olfr1252-202ENSMUST00000213196 3331 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Trim47Q8C0E3 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Trim47Q8C0E3 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Trim47Q8C0E3 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
Trim47Q8C0E3 Rtl9-201ENSMUST00000165829 4104 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Trim47Q8C0E3 AC137842.3-201ENSMUST00000228855 2397 ntBASIC5.55□□□□□ -1.52
Trim47Q8C0E3 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Trim47Q8C0E3 Gm25595-201ENSMUST00000102273 97 ntBASIC5.55□□□□□ -1.52
Trim47Q8C0E3 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC5.55□□□□□ -1.52
Trim47Q8C0E3 Gm11822-201ENSMUST00000119177 415 ntBASIC5.55□□□□□ -1.52
Trim47Q8C0E3 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC5.55□□□□□ -1.52
Trim47Q8C0E3 Gm25655-201ENSMUST00000158465 290 ntBASIC5.55□□□□□ -1.52
Trim47Q8C0E3 Gm17052-201ENSMUST00000165496 289 ntBASIC5.55□□□□□ -1.52
Trim47Q8C0E3 Gm6214-201ENSMUST00000178845 541 ntBASIC5.55□□□□□ -1.52
Trim47Q8C0E3 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Trim47Q8C0E3 Mir6346-201ENSMUST00000183982 81 ntBASIC5.55□□□□□ -1.52
Trim47Q8C0E3 Gm27624-201ENSMUST00000185047 177 ntBASIC5.55□□□□□ -1.52
Trim47Q8C0E3 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC5.55□□□□□ -1.52
Trim47Q8C0E3 Gm37416-201ENSMUST00000193596 318 ntBASIC5.55□□□□□ -1.52
Trim47Q8C0E3 Gm5552-201ENSMUST00000197149 515 ntBASIC5.55□□□□□ -1.52
Trim47Q8C0E3 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Trim47Q8C0E3 AC188459.1-201ENSMUST00000216651 300 ntBASIC5.55□□□□□ -1.52
Trim47Q8C0E3 AC109180.1-201ENSMUST00000218676 398 ntBASIC5.55□□□□□ -1.52
Trim47Q8C0E3 Gm4263-201ENSMUST00000220693 1101 ntBASIC5.55□□□□□ -1.52
Trim47Q8C0E3 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Trim47Q8C0E3 Gm25147-201ENSMUST00000083030 105 ntBASIC5.55□□□□□ -1.52
Trim47Q8C0E3 Olfr1192-ps1-201ENSMUST00000120518 2738 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Trim47Q8C0E3 Malrd1-201ENSMUST00000146205 6738 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Trim47Q8C0E3 Gm36298-201ENSMUST00000223394 1732 ntBASIC5.54□□□□□ -1.52
Trim47Q8C0E3 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC5.54□□□□□ -1.52
Trim47Q8C0E3 Mtx3-201ENSMUST00000076169 6275 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Trim47Q8C0E3 Olfr1303-202ENSMUST00000216114 2976 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Trim47Q8C0E3 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Trim47Q8C0E3 Gm25096-201ENSMUST00000104043 129 ntBASIC5.54□□□□□ -1.52
Trim47Q8C0E3 Gm6897-201ENSMUST00000117714 138 ntBASIC5.54□□□□□ -1.52
Trim47Q8C0E3 Gm15772-201ENSMUST00000118533 438 ntBASIC5.54□□□□□ -1.52
Trim47Q8C0E3 Gm14758-201ENSMUST00000119104 138 ntBASIC5.54□□□□□ -1.52
Trim47Q8C0E3 Gm6062-201ENSMUST00000120462 631 ntBASIC5.54□□□□□ -1.52
Trim47Q8C0E3 Gm13424-201ENSMUST00000122301 354 ntBASIC5.54□□□□□ -1.52
Trim47Q8C0E3 Gm22849-201ENSMUST00000157713 307 ntBASIC5.54□□□□□ -1.52
Trim47Q8C0E3 Gm28020-201ENSMUST00000157739 67 ntBASIC5.54□□□□□ -1.52
Trim47Q8C0E3 Gm25555-201ENSMUST00000158078 111 ntBASIC5.54□□□□□ -1.52
Trim47Q8C0E3 Gm26404-201ENSMUST00000158498 109 ntBASIC5.54□□□□□ -1.52
Trim47Q8C0E3 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Trim47Q8C0E3 Mir6943-201ENSMUST00000185186 66 ntBASIC5.54□□□□□ -1.52
Trim47Q8C0E3 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC5.54□□□□□ -1.52
Trim47Q8C0E3 Gm18177-201ENSMUST00000188373 404 ntBASIC5.54□□□□□ -1.52
Trim47Q8C0E3 Gm20056-201ENSMUST00000194813 519 ntBASIC5.54□□□□□ -1.52
Trim47Q8C0E3 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC5.54□□□□□ -1.52
Trim47Q8C0E3 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Trim47Q8C0E3 AC155712.1-201ENSMUST00000219704 160 ntBASIC5.54□□□□□ -1.52
Trim47Q8C0E3 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC5.54□□□□□ -1.52
Trim47Q8C0E3 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC5.54□□□□□ -1.52
Trim47Q8C0E3 Olfr346-201ENSMUST00000078854 930 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Trim47Q8C0E3 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Trim47Q8C0E3 Gm7381-201ENSMUST00000098958 300 ntBASIC5.54□□□□□ -1.52
Trim47Q8C0E3 Gm13212-203ENSMUST00000119718 2498 ntTSL 5 BASIC5.54□□□□□ -1.52
Trim47Q8C0E3 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
Trim47Q8C0E3 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Trim47Q8C0E3 Gm17969-201ENSMUST00000185706 2557 ntBASIC5.54□□□□□ -1.52
Trim47Q8C0E3 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Trim47Q8C0E3 Vmn2r88-202ENSMUST00000159674 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Trim47Q8C0E3 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC5.54□□□□□ -1.52
Trim47Q8C0E3 Fmo2-201ENSMUST00000045902 4066 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Trim47Q8C0E3 Gm37527-201ENSMUST00000192406 3547 ntBASIC5.53□□□□□ -1.52
Trim47Q8C0E3 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Trim47Q8C0E3 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Trim47Q8C0E3 Gm44535-201ENSMUST00000208889 3136 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 92.7 ms