Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Gm14390-201ENSMUST00000117505 1695 ntBASIC5.21□□□□□ -1.58
Trim56Q80VI1 Olfr1501-202ENSMUST00000208493 4230 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
Trim56Q80VI1 Gm42551-201ENSMUST00000197701 1573 ntBASIC5.21□□□□□ -1.58
Trim56Q80VI1 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Trim56Q80VI1 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC5.2□□□□□ -1.58
Trim56Q80VI1 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Trim56Q80VI1 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Trim56Q80VI1 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC5.2□□□□□ -1.58
Trim56Q80VI1 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC5.2□□□□□ -1.58
Trim56Q80VI1 Gpm6a-201ENSMUST00000033915 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Trim56Q80VI1 Mir592-201ENSMUST00000102113 96 ntBASIC5.2□□□□□ -1.58
Trim56Q80VI1 Gm26367-201ENSMUST00000104165 132 ntBASIC5.2□□□□□ -1.58
Trim56Q80VI1 Gm14823-201ENSMUST00000117698 238 ntBASIC5.2□□□□□ -1.58
Trim56Q80VI1 Gm11936-201ENSMUST00000118323 160 ntBASIC5.2□□□□□ -1.58
Trim56Q80VI1 Gm11849-201ENSMUST00000121293 261 ntBASIC5.2□□□□□ -1.58
Trim56Q80VI1 Gm24409-201ENSMUST00000157881 152 ntBASIC5.2□□□□□ -1.58
Trim56Q80VI1 Gm22726-201ENSMUST00000158089 179 ntBASIC5.2□□□□□ -1.58
Trim56Q80VI1 Gm21842-201ENSMUST00000177552 498 ntBASIC5.2□□□□□ -1.58
Trim56Q80VI1 Gm21626-201ENSMUST00000177791 498 ntBASIC5.2□□□□□ -1.58
Trim56Q80VI1 Gm21562-201ENSMUST00000177888 498 ntBASIC5.2□□□□□ -1.58
Trim56Q80VI1 Gm21539-201ENSMUST00000177925 498 ntBASIC5.2□□□□□ -1.58
Trim56Q80VI1 Gm21599-201ENSMUST00000178249 498 ntBASIC5.2□□□□□ -1.58
Trim56Q80VI1 Gm21914-201ENSMUST00000178452 498 ntBASIC5.2□□□□□ -1.58
Trim56Q80VI1 Gm21723-201ENSMUST00000178692 498 ntBASIC5.2□□□□□ -1.58
Trim56Q80VI1 Gm21916-201ENSMUST00000178771 498 ntBASIC5.2□□□□□ -1.58
Trim56Q80VI1 Gm21801-201ENSMUST00000178865 498 ntBASIC5.2□□□□□ -1.58
Trim56Q80VI1 Gm21633-201ENSMUST00000178941 498 ntBASIC5.2□□□□□ -1.58
Trim56Q80VI1 Gm21821-201ENSMUST00000179646 498 ntBASIC5.2□□□□□ -1.58
Trim56Q80VI1 Gm22263-201ENSMUST00000180060 104 ntBASIC5.2□□□□□ -1.58
Trim56Q80VI1 Gm21588-201ENSMUST00000180074 498 ntBASIC5.2□□□□□ -1.58
Trim56Q80VI1 Gm21780-201ENSMUST00000180128 498 ntBASIC5.2□□□□□ -1.58
Trim56Q80VI1 Gm21572-201ENSMUST00000180134 498 ntBASIC5.2□□□□□ -1.58
Trim56Q80VI1 Gm21529-201ENSMUST00000180175 498 ntBASIC5.2□□□□□ -1.58
Trim56Q80VI1 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC5.2□□□□□ -1.58
Trim56Q80VI1 Gm29370-202ENSMUST00000187476 499 ntBASIC5.2□□□□□ -1.58
Trim56Q80VI1 Gm28552-201ENSMUST00000190725 388 ntBASIC5.2□□□□□ -1.58
Trim56Q80VI1 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC5.2□□□□□ -1.58
Trim56Q80VI1 Gm29522-201ENSMUST00000191530 621 ntTSL 5 BASIC5.2□□□□□ -1.58
Trim56Q80VI1 Mir7227-201ENSMUST00000200408 59 ntBASIC5.2□□□□□ -1.58
Trim56Q80VI1 Gm44720-201ENSMUST00000206076 260 ntBASIC5.2□□□□□ -1.58
Trim56Q80VI1 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC5.2□□□□□ -1.58
Trim56Q80VI1 AC160031.2-201ENSMUST00000218242 274 ntBASIC5.2□□□□□ -1.58
Trim56Q80VI1 AC158803.1-201ENSMUST00000219495 316 ntBASIC5.2□□□□□ -1.58
Trim56Q80VI1 CT572985.2-201ENSMUST00000220496 211 ntBASIC5.2□□□□□ -1.58
Trim56Q80VI1 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC5.2□□□□□ -1.58
Trim56Q80VI1 CT030170.6-201ENSMUST00000221149 550 ntTSL 5 BASIC5.2□□□□□ -1.58
Trim56Q80VI1 AC164883.9-201ENSMUST00000228042 399 ntBASIC5.2□□□□□ -1.58
Trim56Q80VI1 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Trim56Q80VI1 Gm23412-201ENSMUST00000083017 107 ntBASIC5.2□□□□□ -1.58
Trim56Q80VI1 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Trim56Q80VI1 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC5.2□□□□□ -1.58
Trim56Q80VI1 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Trim56Q80VI1 Gm45211-201ENSMUST00000206208 2650 ntBASIC5.2□□□□□ -1.58
Trim56Q80VI1 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Trim56Q80VI1 Ankrd28-204ENSMUST00000227089 3522 ntBASIC5.19□□□□□ -1.58
Trim56Q80VI1 5330437M03Rik-201ENSMUST00000201318 4083 ntBASIC5.19□□□□□ -1.58
Trim56Q80VI1 Macf1-205ENSMUST00000106220 17608 ntTSL 5 BASIC5.19□□□□□ -1.58
Trim56Q80VI1 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC5.19□□□□□ -1.58
Trim56Q80VI1 A230057D06Rik-203ENSMUST00000208953 3357 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Trim56Q80VI1 Gm42559-201ENSMUST00000201811 3532 ntBASIC5.19□□□□□ -1.58
Trim56Q80VI1 Gm22831-201ENSMUST00000102473 109 ntBASIC5.19□□□□□ -1.58
Trim56Q80VI1 Gm12486-201ENSMUST00000120887 541 ntBASIC5.19□□□□□ -1.58
Trim56Q80VI1 Gm5379-201ENSMUST00000120973 826 ntBASIC5.19□□□□□ -1.58
Trim56Q80VI1 Gm11582-201ENSMUST00000121041 236 ntBASIC5.19□□□□□ -1.58
Trim56Q80VI1 Gm14287-201ENSMUST00000121060 117 ntBASIC5.19□□□□□ -1.58
Trim56Q80VI1 Gm15147-201ENSMUST00000122263 483 ntBASIC5.19□□□□□ -1.58
Trim56Q80VI1 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC5.19□□□□□ -1.58
Trim56Q80VI1 Gm23581-201ENSMUST00000158531 63 ntBASIC5.19□□□□□ -1.58
Trim56Q80VI1 Gm8580-201ENSMUST00000160295 464 ntBASIC5.19□□□□□ -1.58
Trim56Q80VI1 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC5.19□□□□□ -1.58
Trim56Q80VI1 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Trim56Q80VI1 Gm28399-201ENSMUST00000186221 318 ntBASIC5.19□□□□□ -1.58
Trim56Q80VI1 Gm28572-201ENSMUST00000187444 318 ntBASIC5.19□□□□□ -1.58
Trim56Q80VI1 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC5.19□□□□□ -1.58
Trim56Q80VI1 Gm29365-201ENSMUST00000189461 699 ntBASIC5.19□□□□□ -1.58
Trim56Q80VI1 Gm19193-201ENSMUST00000190263 590 ntBASIC5.19□□□□□ -1.58
Trim56Q80VI1 Gm37050-201ENSMUST00000193464 466 ntBASIC5.19□□□□□ -1.58
Trim56Q80VI1 Trav5d-2-201ENSMUST00000196107 275 ntBASIC5.19□□□□□ -1.58
Trim56Q80VI1 Trav5n-2-201ENSMUST00000197136 275 ntBASIC5.19□□□□□ -1.58
Trim56Q80VI1 Gm43739-201ENSMUST00000198294 307 ntBASIC5.19□□□□□ -1.58
Trim56Q80VI1 CT010454.1-201ENSMUST00000225975 265 ntBASIC5.19□□□□□ -1.58
Trim56Q80VI1 CT009510.2-203ENSMUST00000226704 2136 ntBASIC5.19□□□□□ -1.58
Trim56Q80VI1 Gm25147-201ENSMUST00000083030 105 ntBASIC5.19□□□□□ -1.58
Trim56Q80VI1 n-R5s160-201ENSMUST00000083096 120 ntBASIC5.19□□□□□ -1.58
Trim56Q80VI1 Gm23645-201ENSMUST00000083228 108 ntBASIC5.19□□□□□ -1.58
Trim56Q80VI1 Olfr1249-201ENSMUST00000099769 957 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Trim56Q80VI1 Olfr1090-201ENSMUST00000099875 942 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Trim56Q80VI1 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Trim56Q80VI1 Gpr21-201ENSMUST00000065441 3619 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Trim56Q80VI1 Gm8104-201ENSMUST00000168165 1761 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Trim56Q80VI1 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Trim56Q80VI1 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Trim56Q80VI1 Vmn2r7-202ENSMUST00000161972 3583 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
Trim56Q80VI1 Olfr819-202ENSMUST00000216322 3930 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Trim56Q80VI1 Gm14124-201ENSMUST00000109922 3018 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
Trim56Q80VI1 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Trim56Q80VI1 Gm21379-201ENSMUST00000179772 1955 ntBASIC5.18□□□□□ -1.58
Trim56Q80VI1 CT030170.3-201ENSMUST00000221205 1815 ntBASIC5.18□□□□□ -1.58
Trim56Q80VI1 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Trim56Q80VI1 Olfr357-202ENSMUST00000213218 5367 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 91.9 ms