Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Gm19301-201ENSMUST00000174283 2210 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Clcn1Q64347 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Clcn1Q64347 Olfr1263-202ENSMUST00000214382 4400 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Clcn1Q64347 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Clcn1Q64347 Vmn2r42-204ENSMUST00000142934 3694 ntTSL 5 BASIC6.35□□□□□ -1.39
Clcn1Q64347 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Clcn1Q64347 Kynu-201ENSMUST00000028223 2733 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Clcn1Q64347 Abcb5-201ENSMUST00000035515 3876 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Clcn1Q64347 Gm5444-201ENSMUST00000065956 2468 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Clcn1Q64347 Gm23014-201ENSMUST00000104144 130 ntBASIC6.34□□□□□ -1.39
Clcn1Q64347 Mup-ps20-201ENSMUST00000121132 389 ntBASIC6.34□□□□□ -1.39
Clcn1Q64347 Gm11430-201ENSMUST00000121317 217 ntBASIC6.34□□□□□ -1.39
Clcn1Q64347 Gm22804-201ENSMUST00000158052 101 ntBASIC6.34□□□□□ -1.39
Clcn1Q64347 Mir6899-201ENSMUST00000184798 64 ntBASIC6.34□□□□□ -1.39
Clcn1Q64347 Gm5058-201ENSMUST00000187331 463 ntBASIC6.34□□□□□ -1.39
Clcn1Q64347 Gm8242-202ENSMUST00000193056 475 ntBASIC6.34□□□□□ -1.39
Clcn1Q64347 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC6.34□□□□□ -1.39
Clcn1Q64347 AC132324.1-201ENSMUST00000221855 584 ntTSL 5 BASIC6.34□□□□□ -1.39
Clcn1Q64347 AC124739.2-201ENSMUST00000222201 109 ntBASIC6.34□□□□□ -1.39
Clcn1Q64347 AC241593.2-201ENSMUST00000225099 510 ntBASIC6.34□□□□□ -1.39
Clcn1Q64347 AC125223.1-203ENSMUST00000225304 498 ntBASIC6.34□□□□□ -1.39
Clcn1Q64347 Olfr1303-202ENSMUST00000216114 2976 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Clcn1Q64347 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Clcn1Q64347 Olfr1250-203ENSMUST00000215730 4632 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Clcn1Q64347 Havcr2-201ENSMUST00000020668 2721 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Clcn1Q64347 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Clcn1Q64347 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Clcn1Q64347 Phf11d-201ENSMUST00000095157 2666 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Clcn1Q64347 AC152414.1-201ENSMUST00000218784 2287 ntTSL 5 BASIC6.33□□□□□ -1.4
Clcn1Q64347 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Clcn1Q64347 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Clcn1Q64347 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
Clcn1Q64347 Olfr417-203ENSMUST00000220394 6080 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Clcn1Q64347 St18-210ENSMUST00000150761 4264 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Clcn1Q64347 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Clcn1Q64347 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Clcn1Q64347 Gm15581-201ENSMUST00000131334 5640 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Clcn1Q64347 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC6.33□□□□□ -1.4
Clcn1Q64347 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Clcn1Q64347 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Clcn1Q64347 Gm15206-201ENSMUST00000119143 454 ntBASIC6.33□□□□□ -1.4
Clcn1Q64347 Gm13903-201ENSMUST00000120945 193 ntBASIC6.33□□□□□ -1.4
Clcn1Q64347 Gm22026-201ENSMUST00000122735 281 ntBASIC6.33□□□□□ -1.4
Clcn1Q64347 Gm12226-201ENSMUST00000144172 876 ntBASIC6.33□□□□□ -1.4
Clcn1Q64347 Gm23121-201ENSMUST00000157653 173 ntBASIC6.33□□□□□ -1.4
Clcn1Q64347 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC6.33□□□□□ -1.4
Clcn1Q64347 Mir3104-201ENSMUST00000174911 63 ntBASIC6.33□□□□□ -1.4
Clcn1Q64347 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC6.33□□□□□ -1.4
Clcn1Q64347 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Clcn1Q64347 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Clcn1Q64347 Gm27688-201ENSMUST00000183634 91 ntBASIC6.33□□□□□ -1.4
Clcn1Q64347 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC6.33□□□□□ -1.4
Clcn1Q64347 Gm27624-201ENSMUST00000185047 177 ntBASIC6.33□□□□□ -1.4
Clcn1Q64347 Gm37624-201ENSMUST00000193751 219 ntBASIC6.33□□□□□ -1.4
Clcn1Q64347 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC6.33□□□□□ -1.4
Clcn1Q64347 Gm34091-201ENSMUST00000200875 604 ntBASIC6.33□□□□□ -1.4
Clcn1Q64347 Gm44757-201ENSMUST00000206373 157 ntBASIC6.33□□□□□ -1.4
Clcn1Q64347 Gm44533-201ENSMUST00000207782 268 ntBASIC6.33□□□□□ -1.4
Clcn1Q64347 Gm18453-201ENSMUST00000208000 626 ntBASIC6.33□□□□□ -1.4
Clcn1Q64347 CT030242.3-201ENSMUST00000221231 581 ntBASIC6.33□□□□□ -1.4
Clcn1Q64347 AC118639.1-201ENSMUST00000227204 338 ntBASIC6.33□□□□□ -1.4
Clcn1Q64347 Gm25818-201ENSMUST00000083282 164 ntBASIC6.33□□□□□ -1.4
Clcn1Q64347 Gnal-202ENSMUST00000076605 5223 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Clcn1Q64347 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC6.33□□□□□ -1.4
Clcn1Q64347 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC6.33□□□□□ -1.4
Clcn1Q64347 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Clcn1Q64347 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
Clcn1Q64347 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Clcn1Q64347 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
Clcn1Q64347 Gm4759-201ENSMUST00000183414 6622 ntBASIC6.33□□□□□ -1.4
Clcn1Q64347 Gm42481-201ENSMUST00000196822 2178 ntBASIC6.33□□□□□ -1.4
Clcn1Q64347 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC6.33□□□□□ -1.4
Clcn1Q64347 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Clcn1Q64347 Gm37357-201ENSMUST00000192386 3123 ntBASIC6.32□□□□□ -1.4
Clcn1Q64347 Gm37504-201ENSMUST00000192537 2374 ntBASIC6.32□□□□□ -1.4
Clcn1Q64347 Olfr293-202ENSMUST00000214401 2852 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Clcn1Q64347 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Clcn1Q64347 Ccna2-205ENSMUST00000196316 2001 ntTSL 5 BASIC6.32□□□□□ -1.4
Clcn1Q64347 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Clcn1Q64347 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
Clcn1Q64347 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC6.32□□□□□ -1.4
Clcn1Q64347 Gm25875-201ENSMUST00000104323 107 ntBASIC6.32□□□□□ -1.4
Clcn1Q64347 Gm14537-201ENSMUST00000117464 599 ntBASIC6.32□□□□□ -1.4
Clcn1Q64347 Gm7312-201ENSMUST00000118798 469 ntBASIC6.32□□□□□ -1.4
Clcn1Q64347 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC6.32□□□□□ -1.4
Clcn1Q64347 Gm23023-201ENSMUST00000158767 109 ntBASIC6.32□□□□□ -1.4
Clcn1Q64347 Gm5777-201ENSMUST00000177265 448 ntBASIC6.32□□□□□ -1.4
Clcn1Q64347 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC6.32□□□□□ -1.4
Clcn1Q64347 Ighv1-6-201ENSMUST00000193849 293 ntBASIC6.32□□□□□ -1.4
Clcn1Q64347 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC6.32□□□□□ -1.4
Clcn1Q64347 Gm42855-201ENSMUST00000197388 253 ntBASIC6.32□□□□□ -1.4
Clcn1Q64347 Gm43309-201ENSMUST00000200837 458 ntBASIC6.32□□□□□ -1.4
Clcn1Q64347 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Clcn1Q64347 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC6.32□□□□□ -1.4
Clcn1Q64347 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC6.32□□□□□ -1.4
Clcn1Q64347 Olfr1119-ps1-201ENSMUST00000215282 634 ntBASIC6.32□□□□□ -1.4
Clcn1Q64347 AC152979.1-201ENSMUST00000218214 289 ntBASIC6.32□□□□□ -1.4
Clcn1Q64347 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC6.32□□□□□ -1.4
Clcn1Q64347 Dst-215ENSMUST00000185269 16340 ntTSL 5 BASIC6.32□□□□□ -1.4
Clcn1Q64347 AC139218.1-201ENSMUST00000228215 4287 ntBASIC6.32□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms