Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.83□□□□□ -2.12
Col7a1Q63870 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC1.83□□□□□ -2.12
Col7a1Q63870 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC1.83□□□□□ -2.12
Col7a1Q63870 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC1.82□□□□□ -2.12
Col7a1Q63870 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Col7a1Q63870 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Col7a1Q63870 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Col7a1Q63870 Gm14819-201ENSMUST00000101645 928 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
Col7a1Q63870 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC1.82□□□□□ -2.12
Col7a1Q63870 Gm11352-201ENSMUST00000119264 517 ntBASIC1.82□□□□□ -2.12
Col7a1Q63870 Gm43239-201ENSMUST00000200131 201 ntBASIC1.82□□□□□ -2.12
Col7a1Q63870 AC239878.1-201ENSMUST00000224212 506 ntBASIC1.82□□□□□ -2.12
Col7a1Q63870 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
Col7a1Q63870 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Col7a1Q63870 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC1.82□□□□□ -2.12
Col7a1Q63870 Gm20345-201ENSMUST00000175839 2414 ntBASIC1.82□□□□□ -2.12
Col7a1Q63870 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
Col7a1Q63870 Gm7133-201ENSMUST00000187797 2039 ntBASIC1.82□□□□□ -2.12
Col7a1Q63870 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Col7a1Q63870 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Col7a1Q63870 Vmn1r71-206ENSMUST00000228098 7165 ntAPPRIS P2 BASIC1.82□□□□□ -2.12
Col7a1Q63870 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC1.82□□□□□ -2.12
Col7a1Q63870 Gm22330-201ENSMUST00000158068 115 ntBASIC1.82□□□□□ -2.12
Col7a1Q63870 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Col7a1Q63870 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC1.82□□□□□ -2.12
Col7a1Q63870 Gm45814-201ENSMUST00000212646 775 ntBASIC1.82□□□□□ -2.12
Col7a1Q63870 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
Col7a1Q63870 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
Col7a1Q63870 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
Col7a1Q63870 Gm43780-201ENSMUST00000196510 3600 ntBASIC1.82□□□□□ -2.12
Col7a1Q63870 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Col7a1Q63870 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Col7a1Q63870 Gm22225-201ENSMUST00000157358 278 ntBASIC1.81□□□□□ -2.12
Col7a1Q63870 Gm22316-201ENSMUST00000158012 216 ntBASIC1.81□□□□□ -2.12
Col7a1Q63870 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.81□□□□□ -2.12
Col7a1Q63870 Gm7039-201ENSMUST00000205138 346 ntBASIC1.81□□□□□ -2.12
Col7a1Q63870 Gm45078-201ENSMUST00000205343 546 ntBASIC1.81□□□□□ -2.12
Col7a1Q63870 Gm7751-201ENSMUST00000212868 709 ntBASIC1.81□□□□□ -2.12
Col7a1Q63870 Gm46993-201ENSMUST00000220708 259 ntBASIC1.81□□□□□ -2.12
Col7a1Q63870 AC109172.2-201ENSMUST00000228792 381 ntBASIC1.81□□□□□ -2.12
Col7a1Q63870 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Col7a1Q63870 Glra3-201ENSMUST00000000275 6508 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
Col7a1Q63870 Gm7905-201ENSMUST00000119933 1386 ntBASIC1.81□□□□□ -2.12
Col7a1Q63870 Gm6221-201ENSMUST00000180064 1386 ntBASIC1.81□□□□□ -2.12
Col7a1Q63870 Gm27013-202ENSMUST00000205067 1436 ntBASIC1.81□□□□□ -2.12
Col7a1Q63870 Gm12891-201ENSMUST00000119358 240 ntBASIC1.81□□□□□ -2.12
Col7a1Q63870 Gm15452-201ENSMUST00000119877 240 ntBASIC1.81□□□□□ -2.12
Col7a1Q63870 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
Col7a1Q63870 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Col7a1Q63870 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Col7a1Q63870 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Col7a1Q63870 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Col7a1Q63870 Gm773-201ENSMUST00000101561 951 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
Col7a1Q63870 Gm8080-201ENSMUST00000122046 1155 ntBASIC1.8□□□□□ -2.12
Col7a1Q63870 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC1.8□□□□□ -2.12
Col7a1Q63870 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Col7a1Q63870 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC1.8□□□□□ -2.12
Col7a1Q63870 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
Col7a1Q63870 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Col7a1Q63870 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC1.8□□□□□ -2.12
Col7a1Q63870 Gm15488-201ENSMUST00000121682 670 ntBASIC1.8□□□□□ -2.12
Col7a1Q63870 Gm13923-201ENSMUST00000153283 288 ntTSL 3 BASIC1.8□□□□□ -2.12
Col7a1Q63870 Gm23005-201ENSMUST00000158950 136 ntBASIC1.8□□□□□ -2.12
Col7a1Q63870 Gm5900-201ENSMUST00000179862 375 ntBASIC1.8□□□□□ -2.12
Col7a1Q63870 Gm38018-201ENSMUST00000195651 540 ntBASIC1.8□□□□□ -2.12
Col7a1Q63870 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Col7a1Q63870 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
Col7a1Q63870 Vmn2r-ps94-201ENSMUST00000116665 1456 ntBASIC1.8□□□□□ -2.12
Col7a1Q63870 AC152951.2-201ENSMUST00000218293 3587 ntBASIC1.8□□□□□ -2.12
Col7a1Q63870 Gm22159-201ENSMUST00000158412 130 ntBASIC1.8□□□□□ -2.12
Col7a1Q63870 Mir5128-201ENSMUST00000175217 84 ntBASIC1.8□□□□□ -2.12
Col7a1Q63870 Gm45778-201ENSMUST00000211959 153 ntBASIC1.8□□□□□ -2.12
Col7a1Q63870 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Col7a1Q63870 Csnka2ip-201ENSMUST00000089279 1336 ntAPPRIS P2 BASIC1.8□□□□□ -2.12
Col7a1Q63870 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
Col7a1Q63870 Gm38211-201ENSMUST00000192814 7217 ntBASIC1.79□□□□□ -2.12
Col7a1Q63870 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Col7a1Q63870 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC1.79□□□□□ -2.12
Col7a1Q63870 Gm11356-201ENSMUST00000118974 192 ntBASIC1.79□□□□□ -2.12
Col7a1Q63870 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC1.79□□□□□ -2.12
Col7a1Q63870 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC1.79□□□□□ -2.12
Col7a1Q63870 AC166323.1-201ENSMUST00000217756 367 ntBASIC1.79□□□□□ -2.12
Col7a1Q63870 AC139845.2-201ENSMUST00000227504 436 ntBASIC1.79□□□□□ -2.12
Col7a1Q63870 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC1.79□□□□□ -2.12
Col7a1Q63870 Mir592-201ENSMUST00000102113 96 ntBASIC1.79□□□□□ -2.12
Col7a1Q63870 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC1.79□□□□□ -2.12
Col7a1Q63870 Gm27648-201ENSMUST00000184315 107 ntBASIC1.79□□□□□ -2.12
Col7a1Q63870 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC1.79□□□□□ -2.12
Col7a1Q63870 Gm44343-201ENSMUST00000196702 90 ntBASIC1.79□□□□□ -2.12
Col7a1Q63870 CT030254.3-201ENSMUST00000225959 1231 ntBASIC1.79□□□□□ -2.12
Col7a1Q63870 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
Col7a1Q63870 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC1.79□□□□□ -2.12
Col7a1Q63870 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC1.79□□□□□ -2.12
Col7a1Q63870 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
Col7a1Q63870 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
Col7a1Q63870 Gm26411-201ENSMUST00000157668 107 ntBASIC1.78□□□□□ -2.12
Col7a1Q63870 Gm23409-201ENSMUST00000158516 237 ntBASIC1.78□□□□□ -2.12
Col7a1Q63870 Mir7052-201ENSMUST00000184821 65 ntBASIC1.78□□□□□ -2.12
Col7a1Q63870 Gm29556-201ENSMUST00000187591 696 ntBASIC1.78□□□□□ -2.12
Col7a1Q63870 Gm7182-201ENSMUST00000193351 732 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms