Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Zfp759-201ENSMUST00000052716 3482 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Trim28Q62318 AC124572.2-201ENSMUST00000218041 5152 ntBASIC4.9□□□□□ -1.63
Trim28Q62318 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Trim28Q62318 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC4.9□□□□□ -1.63
Trim28Q62318 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Trim28Q62318 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Trim28Q62318 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Trim28Q62318 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Trim28Q62318 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Trim28Q62318 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Trim28Q62318 Gm25764-201ENSMUST00000104092 134 ntBASIC4.89□□□□□ -1.63
Trim28Q62318 Gm22019-201ENSMUST00000104359 96 ntBASIC4.89□□□□□ -1.63
Trim28Q62318 Gm13603-201ENSMUST00000119404 83 ntBASIC4.89□□□□□ -1.63
Trim28Q62318 Gm11704-201ENSMUST00000120031 214 ntBASIC4.89□□□□□ -1.63
Trim28Q62318 Gm15387-201ENSMUST00000120421 648 ntBASIC4.89□□□□□ -1.63
Trim28Q62318 Gm15014-201ENSMUST00000120742 258 ntBASIC4.89□□□□□ -1.63
Trim28Q62318 Gm9225-201ENSMUST00000121921 836 ntBASIC4.89□□□□□ -1.63
Trim28Q62318 Gm12693-201ENSMUST00000121965 483 ntBASIC4.89□□□□□ -1.63
Trim28Q62318 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Trim28Q62318 Gm22236-201ENSMUST00000157093 106 ntBASIC4.89□□□□□ -1.63
Trim28Q62318 Mir1934-201ENSMUST00000158127 83 ntBASIC4.89□□□□□ -1.63
Trim28Q62318 Gm25860-201ENSMUST00000158252 126 ntBASIC4.89□□□□□ -1.63
Trim28Q62318 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC4.89□□□□□ -1.63
Trim28Q62318 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC4.89□□□□□ -1.63
Trim28Q62318 Gm23568-201ENSMUST00000177960 92 ntBASIC4.89□□□□□ -1.63
Trim28Q62318 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC4.89□□□□□ -1.63
Trim28Q62318 Gm24829-201ENSMUST00000179245 92 ntBASIC4.89□□□□□ -1.63
Trim28Q62318 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Trim28Q62318 Gm29704-201ENSMUST00000196011 253 ntBASIC4.89□□□□□ -1.63
Trim28Q62318 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC4.89□□□□□ -1.63
Trim28Q62318 Gm43513-201ENSMUST00000199779 1076 ntBASIC4.89□□□□□ -1.63
Trim28Q62318 Gm45245-201ENSMUST00000210082 376 ntBASIC4.89□□□□□ -1.63
Trim28Q62318 Gm45327-201ENSMUST00000211612 565 ntBASIC4.89□□□□□ -1.63
Trim28Q62318 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Trim28Q62318 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Trim28Q62318 AC160865.1-201ENSMUST00000219873 151 ntBASIC4.89□□□□□ -1.63
Trim28Q62318 Gm18116-201ENSMUST00000220920 537 ntBASIC4.89□□□□□ -1.63
Trim28Q62318 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC4.89□□□□□ -1.63
Trim28Q62318 AC155167.1-201ENSMUST00000228931 614 ntBASIC4.89□□□□□ -1.63
Trim28Q62318 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Trim28Q62318 Gm23404-201ENSMUST00000082543 97 ntBASIC4.89□□□□□ -1.63
Trim28Q62318 Gm5518-201ENSMUST00000084171 648 ntBASIC4.89□□□□□ -1.63
Trim28Q62318 Gm6361-201ENSMUST00000091031 435 ntBASIC4.89□□□□□ -1.63
Trim28Q62318 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Trim28Q62318 Gm43793-201ENSMUST00000201645 1333 ntBASIC4.89□□□□□ -1.63
Trim28Q62318 Gm42447-201ENSMUST00000200102 2903 ntBASIC4.89□□□□□ -1.63
Trim28Q62318 Gm37677-201ENSMUST00000194520 7634 ntBASIC4.89□□□□□ -1.63
Trim28Q62318 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
Trim28Q62318 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Trim28Q62318 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Trim28Q62318 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Trim28Q62318 Gm6592-201ENSMUST00000115563 507 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Trim28Q62318 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC4.88□□□□□ -1.63
Trim28Q62318 Gm6587-201ENSMUST00000120219 613 ntBASIC4.88□□□□□ -1.63
Trim28Q62318 Gm14392-201ENSMUST00000120332 401 ntBASIC4.88□□□□□ -1.63
Trim28Q62318 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC4.88□□□□□ -1.63
Trim28Q62318 Gm13773-201ENSMUST00000156693 583 ntTSL 3 BASIC4.88□□□□□ -1.63
Trim28Q62318 Gm22792-201ENSMUST00000157225 133 ntBASIC4.88□□□□□ -1.63
Trim28Q62318 Gm22310-201ENSMUST00000157509 116 ntBASIC4.88□□□□□ -1.63
Trim28Q62318 Gm26349-201ENSMUST00000157530 130 ntBASIC4.88□□□□□ -1.63
Trim28Q62318 Gm22534-201ENSMUST00000158173 104 ntBASIC4.88□□□□□ -1.63
Trim28Q62318 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC4.88□□□□□ -1.63
Trim28Q62318 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Trim28Q62318 Gm28872-201ENSMUST00000191518 158 ntBASIC4.88□□□□□ -1.63
Trim28Q62318 Gm44385-201ENSMUST00000198781 81 ntBASIC4.88□□□□□ -1.63
Trim28Q62318 Gm46146-201ENSMUST00000217483 346 ntBASIC4.88□□□□□ -1.63
Trim28Q62318 AC153948.1-201ENSMUST00000219080 3838 ntBASIC4.88□□□□□ -1.63
Trim28Q62318 AC132465.3-201ENSMUST00000219326 195 ntBASIC4.88□□□□□ -1.63
Trim28Q62318 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC4.88□□□□□ -1.63
Trim28Q62318 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Trim28Q62318 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Trim28Q62318 Gm25793-201ENSMUST00000083287 107 ntBASIC4.88□□□□□ -1.63
Trim28Q62318 AC153522.2-201ENSMUST00000218389 3853 ntBASIC4.88□□□□□ -1.63
Trim28Q62318 Olfr1167-202ENSMUST00000216951 4276 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Trim28Q62318 Olfr1152-202ENSMUST00000213308 6201 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Trim28Q62318 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Trim28Q62318 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Trim28Q62318 Gm38278-201ENSMUST00000194715 1365 ntBASIC4.88□□□□□ -1.63
Trim28Q62318 1700049E17Rik1-201ENSMUST00000095985 1761 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
Trim28Q62318 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Trim28Q62318 Olfr575-203ENSMUST00000216420 3500 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Trim28Q62318 Gm43508-201ENSMUST00000197251 3783 ntBASIC4.87□□□□□ -1.63
Trim28Q62318 Ncoa7-207ENSMUST00000215740 7043 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
Trim28Q62318 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Trim28Q62318 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Trim28Q62318 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC4.87□□□□□ -1.63
Trim28Q62318 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
Trim28Q62318 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC4.87□□□□□ -1.63
Trim28Q62318 Gm7421-201ENSMUST00000119298 639 ntBASIC4.87□□□□□ -1.63
Trim28Q62318 Gm16005-201ENSMUST00000120515 269 ntBASIC4.87□□□□□ -1.63
Trim28Q62318 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC4.87□□□□□ -1.63
Trim28Q62318 Gm7365-201ENSMUST00000120877 639 ntBASIC4.87□□□□□ -1.63
Trim28Q62318 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC4.87□□□□□ -1.63
Trim28Q62318 Gm26256-201ENSMUST00000122499 186 ntBASIC4.87□□□□□ -1.63
Trim28Q62318 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Trim28Q62318 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Trim28Q62318 Gm24008-201ENSMUST00000157733 138 ntBASIC4.87□□□□□ -1.63
Trim28Q62318 Gm23666-201ENSMUST00000158053 116 ntBASIC4.87□□□□□ -1.63
Trim28Q62318 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC4.87□□□□□ -1.63
Trim28Q62318 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC4.87□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 95.9 ms