Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Gm7438-201ENSMUST00000177664 639 ntBASIC2.35□□□□□ -2.03
Trav3-3Q5R1C3 Gm7408-201ENSMUST00000178014 639 ntBASIC2.35□□□□□ -2.03
Trav3-3Q5R1C3 Gm7386-201ENSMUST00000178020 639 ntBASIC2.35□□□□□ -2.03
Trav3-3Q5R1C3 Gm3657-201ENSMUST00000178170 639 ntBASIC2.35□□□□□ -2.03
Trav3-3Q5R1C3 Gm7415-201ENSMUST00000178205 639 ntBASIC2.35□□□□□ -2.03
Trav3-3Q5R1C3 Gm7398-201ENSMUST00000178589 639 ntBASIC2.35□□□□□ -2.03
Trav3-3Q5R1C3 Gm7391-201ENSMUST00000178680 639 ntBASIC2.35□□□□□ -2.03
Trav3-3Q5R1C3 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Trav3-3Q5R1C3 Gm7375-201ENSMUST00000179232 639 ntBASIC2.35□□□□□ -2.03
Trav3-3Q5R1C3 Gm3681-201ENSMUST00000179940 639 ntBASIC2.35□□□□□ -2.03
Trav3-3Q5R1C3 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC2.35□□□□□ -2.03
Trav3-3Q5R1C3 Gm27342-201ENSMUST00000183530 109 ntBASIC2.35□□□□□ -2.03
Trav3-3Q5R1C3 Gm6651-201ENSMUST00000189471 271 ntBASIC2.35□□□□□ -2.03
Trav3-3Q5R1C3 Gm19030-201ENSMUST00000194947 552 ntBASIC2.35□□□□□ -2.03
Trav3-3Q5R1C3 Gm42818-201ENSMUST00000198869 987 ntBASIC2.35□□□□□ -2.03
Trav3-3Q5R1C3 Gm44332-201ENSMUST00000203712 433 ntBASIC2.35□□□□□ -2.03
Trav3-3Q5R1C3 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC2.35□□□□□ -2.03
Trav3-3Q5R1C3 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC2.35□□□□□ -2.03
Trav3-3Q5R1C3 Gm45553-201ENSMUST00000209929 507 ntBASIC2.35□□□□□ -2.03
Trav3-3Q5R1C3 Gm7786-201ENSMUST00000210494 436 ntBASIC2.35□□□□□ -2.03
Trav3-3Q5R1C3 Gm6657-204ENSMUST00000211288 1091 ntAPPRIS P5 TSL 5 BASIC2.35□□□□□ -2.03
Trav3-3Q5R1C3 5430401H09Rik-201ENSMUST00000218145 1076 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Trav3-3Q5R1C3 AC157017.2-201ENSMUST00000218354 777 ntBASIC2.35□□□□□ -2.03
Trav3-3Q5R1C3 Gm8231-201ENSMUST00000221617 783 ntBASIC2.35□□□□□ -2.03
Trav3-3Q5R1C3 AC140451.2-202ENSMUST00000226156 574 ntBASIC2.35□□□□□ -2.03
Trav3-3Q5R1C3 AC125223.3-201ENSMUST00000223588 2067 ntBASIC2.35□□□□□ -2.03
Trav3-3Q5R1C3 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Trav3-3Q5R1C3 Gm43780-201ENSMUST00000196510 3600 ntBASIC2.35□□□□□ -2.03
Trav3-3Q5R1C3 Gm42445-201ENSMUST00000196996 2893 ntBASIC2.35□□□□□ -2.03
Trav3-3Q5R1C3 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
Trav3-3Q5R1C3 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
Trav3-3Q5R1C3 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Trav3-3Q5R1C3 Gm42534-201ENSMUST00000196063 1754 ntBASIC2.34□□□□□ -2.03
Trav3-3Q5R1C3 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
Trav3-3Q5R1C3 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
Trav3-3Q5R1C3 Gm26145-201ENSMUST00000104476 127 ntBASIC2.34□□□□□ -2.03
Trav3-3Q5R1C3 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Trav3-3Q5R1C3 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC2.34□□□□□ -2.03
Trav3-3Q5R1C3 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.03
Trav3-3Q5R1C3 Gm14975-201ENSMUST00000118741 664 ntBASIC2.34□□□□□ -2.03
Trav3-3Q5R1C3 Gm14669-201ENSMUST00000118841 250 ntBASIC2.34□□□□□ -2.03
Trav3-3Q5R1C3 Gm26276-201ENSMUST00000157099 109 ntBASIC2.34□□□□□ -2.03
Trav3-3Q5R1C3 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC2.34□□□□□ -2.03
Trav3-3Q5R1C3 Gm16290-201ENSMUST00000161175 474 ntBASIC2.34□□□□□ -2.03
Trav3-3Q5R1C3 Gm27834-201ENSMUST00000183427 125 ntBASIC2.34□□□□□ -2.03
Trav3-3Q5R1C3 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC2.34□□□□□ -2.03
Trav3-3Q5R1C3 Mir6353-201ENSMUST00000183596 113 ntBASIC2.34□□□□□ -2.03
Trav3-3Q5R1C3 Gm27608-201ENSMUST00000184822 162 ntBASIC2.34□□□□□ -2.03
Trav3-3Q5R1C3 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
Trav3-3Q5R1C3 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC2.34□□□□□ -2.03
Trav3-3Q5R1C3 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
Trav3-3Q5R1C3 Gm43070-201ENSMUST00000196938 415 ntBASIC2.34□□□□□ -2.03
Trav3-3Q5R1C3 Gm31693-201ENSMUST00000200150 909 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
Trav3-3Q5R1C3 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC2.34□□□□□ -2.03
Trav3-3Q5R1C3 Gm44208-201ENSMUST00000205199 421 ntBASIC2.34□□□□□ -2.03
Trav3-3Q5R1C3 Gm44611-201ENSMUST00000207507 355 ntBASIC2.34□□□□□ -2.03
Trav3-3Q5R1C3 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC2.34□□□□□ -2.03
Trav3-3Q5R1C3 CT010455.1-201ENSMUST00000218579 413 ntBASIC2.34□□□□□ -2.03
Trav3-3Q5R1C3 Gm4036-201ENSMUST00000220842 626 ntBASIC2.34□□□□□ -2.03
Trav3-3Q5R1C3 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
Trav3-3Q5R1C3 AC074315.1-201ENSMUST00000228801 214 ntBASIC2.34□□□□□ -2.03
Trav3-3Q5R1C3 Gm23932-201ENSMUST00000082914 107 ntBASIC2.34□□□□□ -2.03
Trav3-3Q5R1C3 Mir21a-201ENSMUST00000083521 92 ntBASIC2.34□□□□□ -2.03
Trav3-3Q5R1C3 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
Trav3-3Q5R1C3 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
Trav3-3Q5R1C3 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
Trav3-3Q5R1C3 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
Trav3-3Q5R1C3 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Trav3-3Q5R1C3 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Trav3-3Q5R1C3 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC2.33□□□□□ -2.04
Trav3-3Q5R1C3 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Trav3-3Q5R1C3 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Trav3-3Q5R1C3 Gm26473-201ENSMUST00000116763 127 ntBASIC2.33□□□□□ -2.04
Trav3-3Q5R1C3 Gm13541-201ENSMUST00000119519 283 ntBASIC2.33□□□□□ -2.04
Trav3-3Q5R1C3 Gm14159-201ENSMUST00000119832 451 ntBASIC2.33□□□□□ -2.04
Trav3-3Q5R1C3 Gm14069-201ENSMUST00000120815 229 ntBASIC2.33□□□□□ -2.04
Trav3-3Q5R1C3 Gm12617-201ENSMUST00000121268 381 ntBASIC2.33□□□□□ -2.04
Trav3-3Q5R1C3 Gm12706-201ENSMUST00000121588 698 ntBASIC2.33□□□□□ -2.04
Trav3-3Q5R1C3 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Trav3-3Q5R1C3 Gm23213-201ENSMUST00000122715 313 ntBASIC2.33□□□□□ -2.04
Trav3-3Q5R1C3 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC2.33□□□□□ -2.04
Trav3-3Q5R1C3 Gm24534-201ENSMUST00000157949 291 ntBASIC2.33□□□□□ -2.04
Trav3-3Q5R1C3 Gm24532-201ENSMUST00000157951 286 ntBASIC2.33□□□□□ -2.04
Trav3-3Q5R1C3 Gm17038-201ENSMUST00000166586 494 ntBASIC2.33□□□□□ -2.04
Trav3-3Q5R1C3 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC2.33□□□□□ -2.04
Trav3-3Q5R1C3 Gm24819-201ENSMUST00000175094 166 ntBASIC2.33□□□□□ -2.04
Trav3-3Q5R1C3 Mir3473f-201ENSMUST00000183743 136 ntBASIC2.33□□□□□ -2.04
Trav3-3Q5R1C3 Gm28628-201ENSMUST00000187006 264 ntBASIC2.33□□□□□ -2.04
Trav3-3Q5R1C3 Gm28629-201ENSMUST00000187309 263 ntBASIC2.33□□□□□ -2.04
Trav3-3Q5R1C3 Gm28069-201ENSMUST00000189926 214 ntBASIC2.33□□□□□ -2.04
Trav3-3Q5R1C3 Gm20776-201ENSMUST00000189940 700 ntBASIC2.33□□□□□ -2.04
Trav3-3Q5R1C3 Gm7142-201ENSMUST00000194232 586 ntBASIC2.33□□□□□ -2.04
Trav3-3Q5R1C3 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC2.33□□□□□ -2.04
Trav3-3Q5R1C3 Igkv15-97-201ENSMUST00000197637 339 ntBASIC2.33□□□□□ -2.04
Trav3-3Q5R1C3 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Trav3-3Q5R1C3 Gm42621-201ENSMUST00000198114 275 ntBASIC2.33□□□□□ -2.04
Trav3-3Q5R1C3 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC2.33□□□□□ -2.04
Trav3-3Q5R1C3 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Trav3-3Q5R1C3 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC2.33□□□□□ -2.04
Trav3-3Q5R1C3 Gm45539-201ENSMUST00000210313 428 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms