Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Gm6501-201ENSMUST00000187178 916 ntBASIC3.66□□□□□ -1.82
Ccdc88bQ4QRL3 Gm19761-201ENSMUST00000205372 391 ntBASIC3.66□□□□□ -1.82
Ccdc88bQ4QRL3 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Ccdc88bQ4QRL3 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Ccdc88bQ4QRL3 Olfr427-201ENSMUST00000080831 948 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Ccdc88bQ4QRL3 n-R5s220-201ENSMUST00000082926 120 ntBASIC3.66□□□□□ -1.82
Ccdc88bQ4QRL3 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Ccdc88bQ4QRL3 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
Ccdc88bQ4QRL3 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC3.65□□□□□ -1.82
Ccdc88bQ4QRL3 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC3.65□□□□□ -1.83
Ccdc88bQ4QRL3 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Ccdc88bQ4QRL3 Gm27163-201ENSMUST00000184767 409 ntBASIC3.65□□□□□ -1.83
Ccdc88bQ4QRL3 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Ccdc88bQ4QRL3 AC158536.1-201ENSMUST00000222510 256 ntBASIC3.65□□□□□ -1.83
Ccdc88bQ4QRL3 AC134468.2-201ENSMUST00000222549 672 ntBASIC3.65□□□□□ -1.83
Ccdc88bQ4QRL3 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Ccdc88bQ4QRL3 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Ccdc88bQ4QRL3 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC3.65□□□□□ -1.83
Ccdc88bQ4QRL3 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Ccdc88bQ4QRL3 Gm37788-201ENSMUST00000193958 2705 ntBASIC3.64□□□□□ -1.83
Ccdc88bQ4QRL3 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
Ccdc88bQ4QRL3 Kpna2-202ENSMUST00000106768 541 ntTSL 2 BASIC3.64□□□□□ -1.83
Ccdc88bQ4QRL3 Klra7-204ENSMUST00000112013 1104 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
Ccdc88bQ4QRL3 Gm14652-201ENSMUST00000118479 235 ntBASIC3.64□□□□□ -1.83
Ccdc88bQ4QRL3 Gm25836-201ENSMUST00000158918 123 ntBASIC3.64□□□□□ -1.83
Ccdc88bQ4QRL3 Gm29657-201ENSMUST00000189807 342 ntBASIC3.64□□□□□ -1.83
Ccdc88bQ4QRL3 Gm10400-201ENSMUST00000203920 3835 ntBASIC3.64□□□□□ -1.83
Ccdc88bQ4QRL3 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC3.64□□□□□ -1.83
Ccdc88bQ4QRL3 Gm16381-201ENSMUST00000220528 503 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Ccdc88bQ4QRL3 Gm2001-201ENSMUST00000223236 503 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Ccdc88bQ4QRL3 AC183092.2-201ENSMUST00000225542 1153 ntBASIC3.64□□□□□ -1.83
Ccdc88bQ4QRL3 Mir222-201ENSMUST00000083537 79 ntBASIC3.64□□□□□ -1.83
Ccdc88bQ4QRL3 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Ccdc88bQ4QRL3 Gm43326-201ENSMUST00000198459 1638 ntBASIC3.64□□□□□ -1.83
Ccdc88bQ4QRL3 Gm14579-201ENSMUST00000117068 283 ntBASIC3.63□□□□□ -1.83
Ccdc88bQ4QRL3 Gm14880-201ENSMUST00000117581 292 ntBASIC3.63□□□□□ -1.83
Ccdc88bQ4QRL3 n-R5s164-201ENSMUST00000122664 112 ntBASIC3.63□□□□□ -1.83
Ccdc88bQ4QRL3 Mir8103-201ENSMUST00000183945 107 ntBASIC3.63□□□□□ -1.83
Ccdc88bQ4QRL3 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Ccdc88bQ4QRL3 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Ccdc88bQ4QRL3 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Ccdc88bQ4QRL3 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Ccdc88bQ4QRL3 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC3.63□□□□□ -1.83
Ccdc88bQ4QRL3 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Ccdc88bQ4QRL3 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Ccdc88bQ4QRL3 Gm44431-201ENSMUST00000203500 413 ntBASIC3.63□□□□□ -1.83
Ccdc88bQ4QRL3 AC116726.2-201ENSMUST00000217629 986 ntBASIC3.63□□□□□ -1.83
Ccdc88bQ4QRL3 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC3.63□□□□□ -1.83
Ccdc88bQ4QRL3 Olfr813-201ENSMUST00000064893 933 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Ccdc88bQ4QRL3 Gm22423-201ENSMUST00000082861 184 ntBASIC3.63□□□□□ -1.83
Ccdc88bQ4QRL3 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Ccdc88bQ4QRL3 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Ccdc88bQ4QRL3 Gm43046-201ENSMUST00000198771 2451 ntBASIC3.62□□□□□ -1.83
Ccdc88bQ4QRL3 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Ccdc88bQ4QRL3 Gm23063-201ENSMUST00000102350 93 ntBASIC3.62□□□□□ -1.83
Ccdc88bQ4QRL3 Gm3940-201ENSMUST00000105087 432 ntBASIC3.62□□□□□ -1.83
Ccdc88bQ4QRL3 Gm9225-201ENSMUST00000121921 836 ntBASIC3.62□□□□□ -1.83
Ccdc88bQ4QRL3 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Ccdc88bQ4QRL3 Gm18448-201ENSMUST00000186286 599 ntBASIC3.62□□□□□ -1.83
Ccdc88bQ4QRL3 Gm18698-201ENSMUST00000192327 668 ntBASIC3.62□□□□□ -1.83
Ccdc88bQ4QRL3 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC3.62□□□□□ -1.83
Ccdc88bQ4QRL3 AC124400.1-201ENSMUST00000225779 193 ntBASIC3.62□□□□□ -1.83
Ccdc88bQ4QRL3 CT030238.4-201ENSMUST00000228579 801 ntBASIC3.62□□□□□ -1.83
Ccdc88bQ4QRL3 Olfr1474-201ENSMUST00000096202 945 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Ccdc88bQ4QRL3 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Ccdc88bQ4QRL3 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
Ccdc88bQ4QRL3 Gm14876-201ENSMUST00000120795 327 ntBASIC3.61□□□□□ -1.83
Ccdc88bQ4QRL3 Gm25807-201ENSMUST00000122783 305 ntBASIC3.61□□□□□ -1.83
Ccdc88bQ4QRL3 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Ccdc88bQ4QRL3 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Ccdc88bQ4QRL3 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Ccdc88bQ4QRL3 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Ccdc88bQ4QRL3 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Ccdc88bQ4QRL3 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Ccdc88bQ4QRL3 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Ccdc88bQ4QRL3 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Ccdc88bQ4QRL3 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Ccdc88bQ4QRL3 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Ccdc88bQ4QRL3 AC162376.1-201ENSMUST00000220120 435 ntBASIC3.61□□□□□ -1.83
Ccdc88bQ4QRL3 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Ccdc88bQ4QRL3 Gm26922-201ENSMUST00000082687 72 ntBASIC3.61□□□□□ -1.83
Ccdc88bQ4QRL3 Gm23460-201ENSMUST00000083258 109 ntBASIC3.61□□□□□ -1.83
Ccdc88bQ4QRL3 Gm21286-201ENSMUST00000098035 545 ntBASIC3.61□□□□□ -1.83
Ccdc88bQ4QRL3 Skint11-204ENSMUST00000164297 1393 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Ccdc88bQ4QRL3 Gm14421-201ENSMUST00000121755 1958 ntBASIC3.6□□□□□ -1.83
Ccdc88bQ4QRL3 Mir592-201ENSMUST00000102113 96 ntBASIC3.6□□□□□ -1.83
Ccdc88bQ4QRL3 Gm24840-201ENSMUST00000122603 147 ntBASIC3.6□□□□□ -1.83
Ccdc88bQ4QRL3 Mir6901-201ENSMUST00000185062 62 ntBASIC3.6□□□□□ -1.83
Ccdc88bQ4QRL3 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Ccdc88bQ4QRL3 Gm44083-201ENSMUST00000203114 337 ntBASIC3.6□□□□□ -1.83
Ccdc88bQ4QRL3 AC124549.2-201ENSMUST00000224243 222 ntBASIC3.6□□□□□ -1.83
Ccdc88bQ4QRL3 Gm22723-201ENSMUST00000083820 129 ntBASIC3.6□□□□□ -1.83
Ccdc88bQ4QRL3 Gm37303-201ENSMUST00000194202 1559 ntBASIC3.6□□□□□ -1.83
Ccdc88bQ4QRL3 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Ccdc88bQ4QRL3 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Ccdc88bQ4QRL3 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Ccdc88bQ4QRL3 n-R5s52-201ENSMUST00000104614 113 ntBASIC3.6□□□□□ -1.83
Ccdc88bQ4QRL3 Gm11344-201ENSMUST00000122011 335 ntBASIC3.6□□□□□ -1.83
Ccdc88bQ4QRL3 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC3.6□□□□□ -1.83
Ccdc88bQ4QRL3 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC3.6□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 88 ms