Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
Upf3bQ3ULL6 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC2.97□□□□□ -1.93
Upf3bQ3ULL6 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC2.96□□□□□ -1.94
Upf3bQ3ULL6 Gm25500-201ENSMUST00000104426 123 ntBASIC2.96□□□□□ -1.94
Upf3bQ3ULL6 Gm9009-201ENSMUST00000117321 326 ntBASIC2.96□□□□□ -1.94
Upf3bQ3ULL6 Gm14981-201ENSMUST00000117325 943 ntBASIC2.96□□□□□ -1.94
Upf3bQ3ULL6 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC2.96□□□□□ -1.94
Upf3bQ3ULL6 Gm16171-201ENSMUST00000118004 324 ntBASIC2.96□□□□□ -1.94
Upf3bQ3ULL6 Gm11582-201ENSMUST00000121041 236 ntBASIC2.96□□□□□ -1.94
Upf3bQ3ULL6 Gm14126-201ENSMUST00000122345 395 ntBASIC2.96□□□□□ -1.94
Upf3bQ3ULL6 DQ267100-201ENSMUST00000122600 72 ntBASIC2.96□□□□□ -1.94
Upf3bQ3ULL6 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC2.96□□□□□ -1.94
Upf3bQ3ULL6 Gm6265-201ENSMUST00000149263 231 ntBASIC2.96□□□□□ -1.94
Upf3bQ3ULL6 Gm25280-201ENSMUST00000157269 101 ntBASIC2.96□□□□□ -1.94
Upf3bQ3ULL6 Gm23895-201ENSMUST00000158108 160 ntBASIC2.96□□□□□ -1.94
Upf3bQ3ULL6 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC2.96□□□□□ -1.94
Upf3bQ3ULL6 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC2.96□□□□□ -1.94
Upf3bQ3ULL6 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
Upf3bQ3ULL6 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC2.96□□□□□ -1.94
Upf3bQ3ULL6 Gm29747-201ENSMUST00000194764 585 ntBASIC2.96□□□□□ -1.94
Upf3bQ3ULL6 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
Upf3bQ3ULL6 Gm43992-201ENSMUST00000204358 197 ntBASIC2.96□□□□□ -1.94
Upf3bQ3ULL6 AC069074.2-201ENSMUST00000217819 428 ntBASIC2.96□□□□□ -1.94
Upf3bQ3ULL6 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC2.96□□□□□ -1.94
Upf3bQ3ULL6 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Upf3bQ3ULL6 Srsy-201ENSMUST00000179900 1618 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Upf3bQ3ULL6 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC2.96□□□□□ -1.94
Upf3bQ3ULL6 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC2.96□□□□□ -1.94
Upf3bQ3ULL6 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
Upf3bQ3ULL6 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Upf3bQ3ULL6 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Upf3bQ3ULL6 Gm19074-201ENSMUST00000218915 1429 ntBASIC2.95□□□□□ -1.94
Upf3bQ3ULL6 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
Upf3bQ3ULL6 Gm23175-201ENSMUST00000104371 132 ntBASIC2.95□□□□□ -1.94
Upf3bQ3ULL6 Gm13614-201ENSMUST00000117306 503 ntBASIC2.95□□□□□ -1.94
Upf3bQ3ULL6 Gm11456-201ENSMUST00000121070 256 ntBASIC2.95□□□□□ -1.94
Upf3bQ3ULL6 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC2.95□□□□□ -1.94
Upf3bQ3ULL6 Gm22330-201ENSMUST00000158068 115 ntBASIC2.95□□□□□ -1.94
Upf3bQ3ULL6 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
Upf3bQ3ULL6 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC2.95□□□□□ -1.94
Upf3bQ3ULL6 Gm22693-201ENSMUST00000175049 442 ntBASIC2.95□□□□□ -1.94
Upf3bQ3ULL6 Gm23268-201ENSMUST00000175494 78 ntBASIC2.95□□□□□ -1.94
Upf3bQ3ULL6 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Upf3bQ3ULL6 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Upf3bQ3ULL6 Gm8649-201ENSMUST00000181799 233 ntBASIC2.95□□□□□ -1.94
Upf3bQ3ULL6 Mir7242-201ENSMUST00000183710 79 ntBASIC2.95□□□□□ -1.94
Upf3bQ3ULL6 Scgb2b31-ps-201ENSMUST00000188734 328 ntBASIC2.95□□□□□ -1.94
Upf3bQ3ULL6 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC2.95□□□□□ -1.94
Upf3bQ3ULL6 Gm37417-201ENSMUST00000195257 454 ntBASIC2.95□□□□□ -1.94
Upf3bQ3ULL6 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC2.95□□□□□ -1.94
Upf3bQ3ULL6 Gm44274-201ENSMUST00000203417 256 ntBASIC2.95□□□□□ -1.94
Upf3bQ3ULL6 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC2.95□□□□□ -1.94
Upf3bQ3ULL6 Gm45588-201ENSMUST00000211213 630 ntBASIC2.95□□□□□ -1.94
Upf3bQ3ULL6 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC2.95□□□□□ -1.94
Upf3bQ3ULL6 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC2.95□□□□□ -1.94
Upf3bQ3ULL6 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC2.95□□□□□ -1.94
Upf3bQ3ULL6 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Upf3bQ3ULL6 Gm6207-201ENSMUST00000120075 1386 ntBASIC2.95□□□□□ -1.94
Upf3bQ3ULL6 Gm6228-201ENSMUST00000178856 1386 ntBASIC2.95□□□□□ -1.94
Upf3bQ3ULL6 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Upf3bQ3ULL6 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Upf3bQ3ULL6 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
Upf3bQ3ULL6 Olfr1050-ps1-201ENSMUST00000119802 947 ntBASIC2.94□□□□□ -1.94
Upf3bQ3ULL6 Gm5958-201ENSMUST00000147698 297 ntBASIC2.94□□□□□ -1.94
Upf3bQ3ULL6 Gm26215-201ENSMUST00000158584 139 ntBASIC2.94□□□□□ -1.94
Upf3bQ3ULL6 Gm24876-201ENSMUST00000158780 92 ntBASIC2.94□□□□□ -1.94
Upf3bQ3ULL6 Gm24736-201ENSMUST00000158862 130 ntBASIC2.94□□□□□ -1.94
Upf3bQ3ULL6 Gm24019-201ENSMUST00000178620 107 ntBASIC2.94□□□□□ -1.94
Upf3bQ3ULL6 Gm26243-201ENSMUST00000179260 107 ntBASIC2.94□□□□□ -1.94
Upf3bQ3ULL6 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Upf3bQ3ULL6 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Upf3bQ3ULL6 Mir7k-201ENSMUST00000184115 110 ntBASIC2.94□□□□□ -1.94
Upf3bQ3ULL6 Gm29576-201ENSMUST00000188020 678 ntBASIC2.94□□□□□ -1.94
Upf3bQ3ULL6 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
Upf3bQ3ULL6 Gm28354-201ENSMUST00000190904 678 ntBASIC2.94□□□□□ -1.94
Upf3bQ3ULL6 Gm37616-201ENSMUST00000193974 322 ntBASIC2.94□□□□□ -1.94
Upf3bQ3ULL6 Gm19137-201ENSMUST00000213790 1164 ntBASIC2.94□□□□□ -1.94
Upf3bQ3ULL6 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
Upf3bQ3ULL6 Olfr1442-201ENSMUST00000057924 1065 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Upf3bQ3ULL6 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
Upf3bQ3ULL6 Gm22249-201ENSMUST00000082485 136 ntBASIC2.94□□□□□ -1.94
Upf3bQ3ULL6 Gm23296-201ENSMUST00000082555 107 ntBASIC2.94□□□□□ -1.94
Upf3bQ3ULL6 Gm24859-201ENSMUST00000082729 107 ntBASIC2.94□□□□□ -1.94
Upf3bQ3ULL6 Gm26458-201ENSMUST00000082832 128 ntBASIC2.94□□□□□ -1.94
Upf3bQ3ULL6 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC2.94□□□□□ -1.94
Upf3bQ3ULL6 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Upf3bQ3ULL6 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
Upf3bQ3ULL6 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Upf3bQ3ULL6 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Upf3bQ3ULL6 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Upf3bQ3ULL6 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Upf3bQ3ULL6 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
Upf3bQ3ULL6 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Upf3bQ3ULL6 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Upf3bQ3ULL6 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Upf3bQ3ULL6 Gm15125-201ENSMUST00000116185 800 ntBASIC2.93□□□□□ -1.94
Upf3bQ3ULL6 Gm13678-201ENSMUST00000118926 340 ntBASIC2.93□□□□□ -1.94
Upf3bQ3ULL6 Gm12787-201ENSMUST00000119234 396 ntBASIC2.93□□□□□ -1.94
Upf3bQ3ULL6 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC2.93□□□□□ -1.94
Upf3bQ3ULL6 Gm23470-201ENSMUST00000157129 120 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms