Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
Upf3aQ3ULJ3 Gm28438-201ENSMUST00000188299 345 ntBASIC3.11□□□□□ -1.91
Upf3aQ3ULJ3 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC3.11□□□□□ -1.91
Upf3aQ3ULJ3 Gm18692-201ENSMUST00000193047 511 ntBASIC3.11□□□□□ -1.91
Upf3aQ3ULJ3 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC3.11□□□□□ -1.91
Upf3aQ3ULJ3 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC3.11□□□□□ -1.91
Upf3aQ3ULJ3 Gm44688-201ENSMUST00000209083 537 ntBASIC3.11□□□□□ -1.91
Upf3aQ3ULJ3 Gm45427-201ENSMUST00000209572 1253 ntBASIC3.11□□□□□ -1.91
Upf3aQ3ULJ3 Gm6842-201ENSMUST00000211361 390 ntBASIC3.11□□□□□ -1.91
Upf3aQ3ULJ3 AC069074.2-201ENSMUST00000217819 428 ntBASIC3.11□□□□□ -1.91
Upf3aQ3ULJ3 AC125531.1-201ENSMUST00000219849 221 ntBASIC3.11□□□□□ -1.91
Upf3aQ3ULJ3 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC3.11□□□□□ -1.91
Upf3aQ3ULJ3 AC126043.1-201ENSMUST00000221304 1141 ntBASIC3.11□□□□□ -1.91
Upf3aQ3ULJ3 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Upf3aQ3ULJ3 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Upf3aQ3ULJ3 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Upf3aQ3ULJ3 Gm24871-201ENSMUST00000083099 116 ntBASIC3.11□□□□□ -1.91
Upf3aQ3ULJ3 Gm22970-201ENSMUST00000083304 186 ntBASIC3.11□□□□□ -1.91
Upf3aQ3ULJ3 Rnu5g-201ENSMUST00000093721 116 ntBASIC3.11□□□□□ -1.91
Upf3aQ3ULJ3 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Upf3aQ3ULJ3 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Upf3aQ3ULJ3 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Upf3aQ3ULJ3 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
Upf3aQ3ULJ3 Gm24671-201ENSMUST00000104159 158 ntBASIC3.1□□□□□ -1.91
Upf3aQ3ULJ3 Gm15126-201ENSMUST00000118631 833 ntBASIC3.1□□□□□ -1.91
Upf3aQ3ULJ3 Gm12889-201ENSMUST00000118684 241 ntBASIC3.1□□□□□ -1.91
Upf3aQ3ULJ3 Gm13581-201ENSMUST00000120675 278 ntBASIC3.1□□□□□ -1.91
Upf3aQ3ULJ3 Gm15147-201ENSMUST00000122263 483 ntBASIC3.1□□□□□ -1.91
Upf3aQ3ULJ3 Gm22478-201ENSMUST00000122570 154 ntBASIC3.1□□□□□ -1.91
Upf3aQ3ULJ3 Gm22766-201ENSMUST00000158372 99 ntBASIC3.1□□□□□ -1.91
Upf3aQ3ULJ3 Gm23312-201ENSMUST00000158774 102 ntBASIC3.1□□□□□ -1.91
Upf3aQ3ULJ3 Gm5929-201ENSMUST00000166883 487 ntBASIC3.1□□□□□ -1.91
Upf3aQ3ULJ3 Gm17164-201ENSMUST00000169013 506 ntBASIC3.1□□□□□ -1.91
Upf3aQ3ULJ3 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC3.1□□□□□ -1.91
Upf3aQ3ULJ3 Gm23268-201ENSMUST00000175494 78 ntBASIC3.1□□□□□ -1.91
Upf3aQ3ULJ3 Gm20656-201ENSMUST00000176925 518 ntBASIC3.1□□□□□ -1.91
Upf3aQ3ULJ3 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Upf3aQ3ULJ3 Gm42578-201ENSMUST00000199960 194 ntBASIC3.1□□□□□ -1.91
Upf3aQ3ULJ3 Gm31520-201ENSMUST00000203048 733 ntBASIC3.1□□□□□ -1.91
Upf3aQ3ULJ3 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC3.1□□□□□ -1.91
Upf3aQ3ULJ3 Zmym2-202ENSMUST00000223669 1281 ntBASIC3.1□□□□□ -1.91
Upf3aQ3ULJ3 AC107663.3-201ENSMUST00000225873 601 ntBASIC3.1□□□□□ -1.91
Upf3aQ3ULJ3 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Upf3aQ3ULJ3 AC127371.1-202ENSMUST00000228923 306 ntBASIC3.1□□□□□ -1.91
Upf3aQ3ULJ3 Olfr1499-201ENSMUST00000055672 1052 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Upf3aQ3ULJ3 Olfr891-201ENSMUST00000062535 951 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Upf3aQ3ULJ3 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Upf3aQ3ULJ3 Gm10025-201ENSMUST00000079568 372 ntBASIC3.1□□□□□ -1.91
Upf3aQ3ULJ3 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Upf3aQ3ULJ3 Olfr1256-201ENSMUST00000099763 921 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Upf3aQ3ULJ3 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC3.1□□□□□ -1.91
Upf3aQ3ULJ3 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
Upf3aQ3ULJ3 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Upf3aQ3ULJ3 Mir344c-201ENSMUST00000103919 92 ntBASIC3.09□□□□□ -1.91
Upf3aQ3ULJ3 Gm24122-201ENSMUST00000104107 132 ntBASIC3.09□□□□□ -1.91
Upf3aQ3ULJ3 Gm14537-201ENSMUST00000117464 599 ntBASIC3.09□□□□□ -1.91
Upf3aQ3ULJ3 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC3.09□□□□□ -1.91
Upf3aQ3ULJ3 Gm14607-201ENSMUST00000119119 491 ntBASIC3.09□□□□□ -1.91
Upf3aQ3ULJ3 Gm6591-201ENSMUST00000121063 434 ntBASIC3.09□□□□□ -1.91
Upf3aQ3ULJ3 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC3.09□□□□□ -1.91
Upf3aQ3ULJ3 Gm3370-201ENSMUST00000171785 500 ntBASIC3.09□□□□□ -1.91
Upf3aQ3ULJ3 Gm25120-201ENSMUST00000180148 79 ntBASIC3.09□□□□□ -1.91
Upf3aQ3ULJ3 Mir7014-201ENSMUST00000183853 63 ntBASIC3.09□□□□□ -1.91
Upf3aQ3ULJ3 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Upf3aQ3ULJ3 Gm43355-201ENSMUST00000196541 346 ntBASIC3.09□□□□□ -1.91
Upf3aQ3ULJ3 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC3.09□□□□□ -1.91
Upf3aQ3ULJ3 Gm44076-201ENSMUST00000203072 520 ntBASIC3.09□□□□□ -1.91
Upf3aQ3ULJ3 Gm34314-201ENSMUST00000203622 367 ntBASIC3.09□□□□□ -1.91
Upf3aQ3ULJ3 AC153899.1-201ENSMUST00000214092 1117 ntBASIC3.09□□□□□ -1.91
Upf3aQ3ULJ3 AC144819.1-201ENSMUST00000227015 620 ntBASIC3.09□□□□□ -1.91
Upf3aQ3ULJ3 AC115878.1-201ENSMUST00000227247 334 ntBASIC3.09□□□□□ -1.91
Upf3aQ3ULJ3 Olfr427-201ENSMUST00000080831 948 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Upf3aQ3ULJ3 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Upf3aQ3ULJ3 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
Upf3aQ3ULJ3 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
Upf3aQ3ULJ3 Gm43879-201ENSMUST00000203811 3760 ntBASIC3.08□□□□□ -1.92
Upf3aQ3ULJ3 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Upf3aQ3ULJ3 Gm24951-201ENSMUST00000102182 109 ntBASIC3.08□□□□□ -1.92
Upf3aQ3ULJ3 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Upf3aQ3ULJ3 Gm9119-201ENSMUST00000118866 495 ntBASIC3.08□□□□□ -1.92
Upf3aQ3ULJ3 Usp46os1-201ENSMUST00000129275 508 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Upf3aQ3ULJ3 Gm24875-201ENSMUST00000158888 104 ntBASIC3.08□□□□□ -1.92
Upf3aQ3ULJ3 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC3.08□□□□□ -1.92
Upf3aQ3ULJ3 Gm19203-201ENSMUST00000174049 939 ntBASIC3.08□□□□□ -1.92
Upf3aQ3ULJ3 Mir3103-201ENSMUST00000175474 67 ntBASIC3.08□□□□□ -1.92
Upf3aQ3ULJ3 Gm25944-201ENSMUST00000178758 94 ntBASIC3.08□□□□□ -1.92
Upf3aQ3ULJ3 Gm25528-201ENSMUST00000180264 132 ntBASIC3.08□□□□□ -1.92
Upf3aQ3ULJ3 Gm27379-201ENSMUST00000183730 123 ntBASIC3.08□□□□□ -1.92
Upf3aQ3ULJ3 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC3.08□□□□□ -1.92
Upf3aQ3ULJ3 Gm42516-201ENSMUST00000198691 767 ntBASIC3.08□□□□□ -1.92
Upf3aQ3ULJ3 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Upf3aQ3ULJ3 AC155839.1-201ENSMUST00000200105 147 ntBASIC3.08□□□□□ -1.92
Upf3aQ3ULJ3 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC3.08□□□□□ -1.92
Upf3aQ3ULJ3 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC3.08□□□□□ -1.92
Upf3aQ3ULJ3 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
Upf3aQ3ULJ3 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
Upf3aQ3ULJ3 Gm30738-201ENSMUST00000221346 502 ntBASIC3.08□□□□□ -1.92
Upf3aQ3ULJ3 Gm46436-201ENSMUST00000221851 1294 ntBASIC3.08□□□□□ -1.92
Upf3aQ3ULJ3 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Upf3aQ3ULJ3 AC124433.2-201ENSMUST00000223867 291 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 93.7 ms