Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Gm38010-201ENSMUST00000192592 2784 ntBASIC4.88□□□□□ -1.63
Rnf180Q3U827 Gm45137-201ENSMUST00000208652 4415 ntBASIC4.88□□□□□ -1.63
Rnf180Q3U827 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
Rnf180Q3U827 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Rnf180Q3U827 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Rnf180Q3U827 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Rnf180Q3U827 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
Rnf180Q3U827 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC4.87□□□□□ -1.63
Rnf180Q3U827 AC167250.1-201ENSMUST00000213739 3813 ntBASIC4.87□□□□□ -1.63
Rnf180Q3U827 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC4.87□□□□□ -1.63
Rnf180Q3U827 Gm14559-201ENSMUST00000121745 496 ntBASIC4.87□□□□□ -1.63
Rnf180Q3U827 Gm25909-201ENSMUST00000157619 121 ntBASIC4.87□□□□□ -1.63
Rnf180Q3U827 Gm23318-201ENSMUST00000158000 108 ntBASIC4.87□□□□□ -1.63
Rnf180Q3U827 Gm24853-201ENSMUST00000158026 121 ntBASIC4.87□□□□□ -1.63
Rnf180Q3U827 Gm23024-201ENSMUST00000158770 292 ntBASIC4.87□□□□□ -1.63
Rnf180Q3U827 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Rnf180Q3U827 Gm28283-201ENSMUST00000185509 178 ntBASIC4.87□□□□□ -1.63
Rnf180Q3U827 Gm28148-201ENSMUST00000186924 697 ntBASIC4.87□□□□□ -1.63
Rnf180Q3U827 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC4.87□□□□□ -1.63
Rnf180Q3U827 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC4.87□□□□□ -1.63
Rnf180Q3U827 Gm37817-201ENSMUST00000195276 434 ntBASIC4.87□□□□□ -1.63
Rnf180Q3U827 Gm42475-201ENSMUST00000201212 295 ntBASIC4.87□□□□□ -1.63
Rnf180Q3U827 Gm44149-201ENSMUST00000204256 226 ntBASIC4.87□□□□□ -1.63
Rnf180Q3U827 Gm45232-201ENSMUST00000207811 162 ntBASIC4.87□□□□□ -1.63
Rnf180Q3U827 AC162387.1-201ENSMUST00000213369 213 ntBASIC4.87□□□□□ -1.63
Rnf180Q3U827 AC116460.1-201ENSMUST00000219040 313 ntBASIC4.87□□□□□ -1.63
Rnf180Q3U827 AC152946.2-201ENSMUST00000219071 337 ntBASIC4.87□□□□□ -1.63
Rnf180Q3U827 Selenok-ps8-201ENSMUST00000221926 280 ntBASIC4.87□□□□□ -1.63
Rnf180Q3U827 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Rnf180Q3U827 Gm22572-201ENSMUST00000082985 105 ntBASIC4.87□□□□□ -1.63
Rnf180Q3U827 Gm22229-201ENSMUST00000082987 108 ntBASIC4.87□□□□□ -1.63
Rnf180Q3U827 Gm25200-201ENSMUST00000083094 130 ntBASIC4.87□□□□□ -1.63
Rnf180Q3U827 Mir19a-201ENSMUST00000083482 82 ntBASIC4.87□□□□□ -1.63
Rnf180Q3U827 Ube2v2-201ENSMUST00000096234 609 ntTSL 3 BASIC4.87□□□□□ -1.63
Rnf180Q3U827 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Rnf180Q3U827 Olfr147-202ENSMUST00000214648 5356 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
Rnf180Q3U827 Gm37696-201ENSMUST00000194223 3349 ntBASIC4.87□□□□□ -1.63
Rnf180Q3U827 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Rnf180Q3U827 Gm37397-201ENSMUST00000194579 2842 ntBASIC4.87□□□□□ -1.63
Rnf180Q3U827 Gm38032-201ENSMUST00000195052 1589 ntBASIC4.87□□□□□ -1.63
Rnf180Q3U827 AC125532.1-201ENSMUST00000216210 2334 ntBASIC4.86□□□□□ -1.63
Rnf180Q3U827 Gm6710-202ENSMUST00000109012 1665 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Rnf180Q3U827 Gm14391-206ENSMUST00000165892 1665 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Rnf180Q3U827 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Rnf180Q3U827 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Rnf180Q3U827 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Rnf180Q3U827 Naa16-201ENSMUST00000022597 13223 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Rnf180Q3U827 AC154634.4-201ENSMUST00000226077 2665 ntBASIC4.86□□□□□ -1.63
Rnf180Q3U827 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Rnf180Q3U827 Mir669i-201ENSMUST00000117007 127 ntBASIC4.86□□□□□ -1.63
Rnf180Q3U827 Gm14670-201ENSMUST00000117327 337 ntBASIC4.86□□□□□ -1.63
Rnf180Q3U827 Gm15399-201ENSMUST00000118055 724 ntBASIC4.86□□□□□ -1.63
Rnf180Q3U827 Gm25294-201ENSMUST00000122791 104 ntBASIC4.86□□□□□ -1.63
Rnf180Q3U827 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC4.86□□□□□ -1.63
Rnf180Q3U827 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Rnf180Q3U827 Gm22156-201ENSMUST00000158409 141 ntBASIC4.86□□□□□ -1.63
Rnf180Q3U827 Gm16125-201ENSMUST00000159003 339 ntBASIC4.86□□□□□ -1.63
Rnf180Q3U827 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC4.86□□□□□ -1.63
Rnf180Q3U827 Gm3851-201ENSMUST00000168653 318 ntBASIC4.86□□□□□ -1.63
Rnf180Q3U827 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC4.86□□□□□ -1.63
Rnf180Q3U827 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC4.86□□□□□ -1.63
Rnf180Q3U827 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC4.86□□□□□ -1.63
Rnf180Q3U827 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Rnf180Q3U827 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC4.86□□□□□ -1.63
Rnf180Q3U827 Gm28552-201ENSMUST00000190725 388 ntBASIC4.86□□□□□ -1.63
Rnf180Q3U827 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC4.86□□□□□ -1.63
Rnf180Q3U827 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Rnf180Q3U827 AC157570.3-201ENSMUST00000219281 205 ntBASIC4.86□□□□□ -1.63
Rnf180Q3U827 AC156798.1-201ENSMUST00000220508 224 ntBASIC4.86□□□□□ -1.63
Rnf180Q3U827 AC159621.1-201ENSMUST00000223249 163 ntBASIC4.86□□□□□ -1.63
Rnf180Q3U827 AC154600.1-201ENSMUST00000226480 714 ntBASIC4.86□□□□□ -1.63
Rnf180Q3U827 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Rnf180Q3U827 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Rnf180Q3U827 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Rnf180Q3U827 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Rnf180Q3U827 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Rnf180Q3U827 Gm21379-201ENSMUST00000179772 1955 ntBASIC4.85□□□□□ -1.63
Rnf180Q3U827 Gm42770-201ENSMUST00000199657 4155 ntBASIC4.85□□□□□ -1.63
Rnf180Q3U827 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Rnf180Q3U827 Gm36944-201ENSMUST00000192257 2759 ntBASIC4.85□□□□□ -1.63
Rnf180Q3U827 H2al1n-201ENSMUST00000105137 514 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Rnf180Q3U827 Gm12568-201ENSMUST00000117362 624 ntBASIC4.85□□□□□ -1.63
Rnf180Q3U827 Gm14558-201ENSMUST00000117458 381 ntBASIC4.85□□□□□ -1.63
Rnf180Q3U827 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC4.85□□□□□ -1.63
Rnf180Q3U827 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC4.85□□□□□ -1.63
Rnf180Q3U827 Gm22851-201ENSMUST00000178741 94 ntBASIC4.85□□□□□ -1.63
Rnf180Q3U827 Gm25074-201ENSMUST00000178782 94 ntBASIC4.85□□□□□ -1.63
Rnf180Q3U827 Gm27599-201ENSMUST00000183758 174 ntBASIC4.85□□□□□ -1.63
Rnf180Q3U827 Mir6382-201ENSMUST00000184055 110 ntBASIC4.85□□□□□ -1.63
Rnf180Q3U827 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC4.85□□□□□ -1.63
Rnf180Q3U827 Gm28282-201ENSMUST00000186072 186 ntBASIC4.85□□□□□ -1.63
Rnf180Q3U827 Gm28660-201ENSMUST00000186496 253 ntBASIC4.85□□□□□ -1.63
Rnf180Q3U827 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC4.85□□□□□ -1.63
Rnf180Q3U827 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC4.85□□□□□ -1.63
Rnf180Q3U827 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
Rnf180Q3U827 Gm2189-201ENSMUST00000201419 429 ntBASIC4.85□□□□□ -1.63
Rnf180Q3U827 Gm19140-201ENSMUST00000209790 421 ntBASIC4.85□□□□□ -1.63
Rnf180Q3U827 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC4.85□□□□□ -1.63
Rnf180Q3U827 Gm45588-201ENSMUST00000211213 630 ntBASIC4.85□□□□□ -1.63
Rnf180Q3U827 Gm45735-201ENSMUST00000212779 319 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms