Protein–RNA interactions for Protein: Q3U4B1

Ssbp4, Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4Q3U4B1 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC3.18□□□□□ -1.9
Ssbp4Q3U4B1 Gm14411-201ENSMUST00000121798 914 ntBASIC3.18□□□□□ -1.9
Ssbp4Q3U4B1 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Ssbp4Q3U4B1 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Ssbp4Q3U4B1 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC3.18□□□□□ -1.9
Ssbp4Q3U4B1 Mir5101-201ENSMUST00000175181 83 ntBASIC3.18□□□□□ -1.9
Ssbp4Q3U4B1 Gm22307-201ENSMUST00000180019 107 ntBASIC3.18□□□□□ -1.9
Ssbp4Q3U4B1 Gm27676-201ENSMUST00000183669 61 ntBASIC3.18□□□□□ -1.9
Ssbp4Q3U4B1 Gm27392-201ENSMUST00000185041 101 ntBASIC3.18□□□□□ -1.9
Ssbp4Q3U4B1 Gm28654-201ENSMUST00000189801 379 ntBASIC3.18□□□□□ -1.9
Ssbp4Q3U4B1 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Ssbp4Q3U4B1 Gm37001-201ENSMUST00000193377 190 ntBASIC3.18□□□□□ -1.9
Ssbp4Q3U4B1 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Ssbp4Q3U4B1 Gm43704-201ENSMUST00000196164 496 ntBASIC3.18□□□□□ -1.9
Ssbp4Q3U4B1 Gm42818-201ENSMUST00000198869 987 ntBASIC3.18□□□□□ -1.9
Ssbp4Q3U4B1 Gm43513-201ENSMUST00000199779 1076 ntBASIC3.18□□□□□ -1.9
Ssbp4Q3U4B1 Olfr512-202ENSMUST00000209620 1056 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Ssbp4Q3U4B1 Gm45366-201ENSMUST00000209828 384 ntBASIC3.18□□□□□ -1.9
Ssbp4Q3U4B1 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC3.18□□□□□ -1.9
Ssbp4Q3U4B1 AC157017.2-201ENSMUST00000218354 777 ntBASIC3.18□□□□□ -1.9
Ssbp4Q3U4B1 AC160865.1-201ENSMUST00000219873 151 ntBASIC3.18□□□□□ -1.9
Ssbp4Q3U4B1 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC3.18□□□□□ -1.9
Ssbp4Q3U4B1 Gm46994-201ENSMUST00000221523 219 ntBASIC3.18□□□□□ -1.9
Ssbp4Q3U4B1 AC133101.1-201ENSMUST00000226939 1199 ntBASIC3.18□□□□□ -1.9
Ssbp4Q3U4B1 AC109172.1-201ENSMUST00000227503 187 ntBASIC3.18□□□□□ -1.9
Ssbp4Q3U4B1 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Ssbp4Q3U4B1 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Ssbp4Q3U4B1 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Ssbp4Q3U4B1 Olfr512-201ENSMUST00000074730 1056 ntBASIC3.18□□□□□ -1.9
Ssbp4Q3U4B1 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Ssbp4Q3U4B1 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
Ssbp4Q3U4B1 AC162910.1-201ENSMUST00000221219 1723 ntBASIC3.18□□□□□ -1.9
Ssbp4Q3U4B1 Gm38073-201ENSMUST00000195141 3665 ntBASIC3.18□□□□□ -1.9
Ssbp4Q3U4B1 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Ssbp4Q3U4B1 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC3.18□□□□□ -1.9
Ssbp4Q3U4B1 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Ssbp4Q3U4B1 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC3.18□□□□□ -1.9
Ssbp4Q3U4B1 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Ssbp4Q3U4B1 Gm43829-201ENSMUST00000196191 3802 ntBASIC3.17□□□□□ -1.9
Ssbp4Q3U4B1 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Ssbp4Q3U4B1 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
Ssbp4Q3U4B1 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
Ssbp4Q3U4B1 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Ssbp4Q3U4B1 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC3.17□□□□□ -1.9
Ssbp4Q3U4B1 Rps15a-ps8-201ENSMUST00000117914 387 ntBASIC3.17□□□□□ -1.9
Ssbp4Q3U4B1 Gm15799-201ENSMUST00000120899 289 ntBASIC3.17□□□□□ -1.9
Ssbp4Q3U4B1 Gm16331-201ENSMUST00000144274 498 ntBASIC3.17□□□□□ -1.9
Ssbp4Q3U4B1 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Ssbp4Q3U4B1 Gm22755-201ENSMUST00000157143 100 ntBASIC3.17□□□□□ -1.9
Ssbp4Q3U4B1 Gm2343-201ENSMUST00000161177 1042 ntBASIC3.17□□□□□ -1.9
Ssbp4Q3U4B1 Gm22166-201ENSMUST00000178419 121 ntBASIC3.17□□□□□ -1.9
Ssbp4Q3U4B1 Gm23288-201ENSMUST00000179213 121 ntBASIC3.17□□□□□ -1.9
Ssbp4Q3U4B1 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC3.17□□□□□ -1.9
Ssbp4Q3U4B1 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC3.17□□□□□ -1.9
Ssbp4Q3U4B1 Mir6341-201ENSMUST00000183490 121 ntBASIC3.17□□□□□ -1.9
Ssbp4Q3U4B1 Mir6938-201ENSMUST00000184173 63 ntBASIC3.17□□□□□ -1.9
Ssbp4Q3U4B1 Gm7654-201ENSMUST00000186738 683 ntBASIC3.17□□□□□ -1.9
Ssbp4Q3U4B1 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Ssbp4Q3U4B1 Gm28802-201ENSMUST00000188624 944 ntBASIC3.17□□□□□ -1.9
Ssbp4Q3U4B1 Gm44348-201ENSMUST00000200165 122 ntBASIC3.17□□□□□ -1.9
Ssbp4Q3U4B1 Gm43578-201ENSMUST00000201250 459 ntBASIC3.17□□□□□ -1.9
Ssbp4Q3U4B1 Gm43227-201ENSMUST00000202239 677 ntBASIC3.17□□□□□ -1.9
Ssbp4Q3U4B1 Gm44092-201ENSMUST00000204470 258 ntBASIC3.17□□□□□ -1.9
Ssbp4Q3U4B1 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC3.17□□□□□ -1.9
Ssbp4Q3U4B1 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC3.17□□□□□ -1.9
Ssbp4Q3U4B1 Gm44910-201ENSMUST00000208451 396 ntBASIC3.17□□□□□ -1.9
Ssbp4Q3U4B1 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC3.17□□□□□ -1.9
Ssbp4Q3U4B1 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC3.17□□□□□ -1.9
Ssbp4Q3U4B1 Gm29809-201ENSMUST00000218423 493 ntBASIC3.17□□□□□ -1.9
Ssbp4Q3U4B1 AC156952.1-201ENSMUST00000220361 793 ntBASIC3.17□□□□□ -1.9
Ssbp4Q3U4B1 Gm18113-201ENSMUST00000220630 303 ntBASIC3.17□□□□□ -1.9
Ssbp4Q3U4B1 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC3.17□□□□□ -1.9
Ssbp4Q3U4B1 AC174797.3-202ENSMUST00000224578 587 ntBASIC3.17□□□□□ -1.9
Ssbp4Q3U4B1 AL645546.1-201ENSMUST00000225001 189 ntBASIC3.17□□□□□ -1.9
Ssbp4Q3U4B1 AC124581.4-201ENSMUST00000225874 463 ntBASIC3.17□□□□□ -1.9
Ssbp4Q3U4B1 AC121898.1-201ENSMUST00000227599 288 ntBASIC3.17□□□□□ -1.9
Ssbp4Q3U4B1 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Ssbp4Q3U4B1 Gm22245-201ENSMUST00000082479 103 ntBASIC3.17□□□□□ -1.9
Ssbp4Q3U4B1 Gm24622-201ENSMUST00000082619 162 ntBASIC3.17□□□□□ -1.9
Ssbp4Q3U4B1 Gm24626-201ENSMUST00000082621 161 ntBASIC3.17□□□□□ -1.9
Ssbp4Q3U4B1 Gm25205-201ENSMUST00000082841 103 ntBASIC3.17□□□□□ -1.9
Ssbp4Q3U4B1 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC3.17□□□□□ -1.9
Ssbp4Q3U4B1 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Ssbp4Q3U4B1 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Ssbp4Q3U4B1 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Ssbp4Q3U4B1 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
Ssbp4Q3U4B1 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Ssbp4Q3U4B1 Gm44625-201ENSMUST00000207838 1561 ntBASIC3.17□□□□□ -1.9
Ssbp4Q3U4B1 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
Ssbp4Q3U4B1 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Ssbp4Q3U4B1 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
Ssbp4Q3U4B1 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
Ssbp4Q3U4B1 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Ssbp4Q3U4B1 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Ssbp4Q3U4B1 Gm15087-201ENSMUST00000117465 1172 ntBASIC3.16□□□□□ -1.9
Ssbp4Q3U4B1 Gm11623-201ENSMUST00000120176 1225 ntBASIC3.16□□□□□ -1.9
Ssbp4Q3U4B1 Gm12691-201ENSMUST00000120186 456 ntBASIC3.16□□□□□ -1.9
Ssbp4Q3U4B1 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Ssbp4Q3U4B1 Gm15244-201ENSMUST00000121122 130 ntBASIC3.16□□□□□ -1.9
Ssbp4Q3U4B1 Gm14413-201ENSMUST00000122158 408 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 94 ms