Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 Gm38375-201ENSMUST00000194610 2227 ntBASIC3.79□□□□□ -1.8
Col28a1Q2UY11 Gm44321-201ENSMUST00000204262 2855 ntBASIC3.79□□□□□ -1.8
Col28a1Q2UY11 Gm5653-201ENSMUST00000223393 1337 ntBASIC3.79□□□□□ -1.8
Col28a1Q2UY11 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Col28a1Q2UY11 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Col28a1Q2UY11 Gm22656-201ENSMUST00000104199 171 ntBASIC3.79□□□□□ -1.8
Col28a1Q2UY11 Gm24403-201ENSMUST00000104616 130 ntBASIC3.79□□□□□ -1.8
Col28a1Q2UY11 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC3.79□□□□□ -1.8
Col28a1Q2UY11 Gm13831-201ENSMUST00000118764 302 ntBASIC3.79□□□□□ -1.8
Col28a1Q2UY11 Gm14128-201ENSMUST00000119514 1011 ntBASIC3.79□□□□□ -1.8
Col28a1Q2UY11 Gm15799-201ENSMUST00000120899 289 ntBASIC3.79□□□□□ -1.8
Col28a1Q2UY11 Gm14845-201ENSMUST00000121259 306 ntBASIC3.79□□□□□ -1.8
Col28a1Q2UY11 Gm25104-201ENSMUST00000122476 163 ntBASIC3.79□□□□□ -1.8
Col28a1Q2UY11 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Col28a1Q2UY11 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC3.79□□□□□ -1.8
Col28a1Q2UY11 Gm24505-201ENSMUST00000157682 126 ntBASIC3.79□□□□□ -1.8
Col28a1Q2UY11 Gm24550-201ENSMUST00000158648 279 ntBASIC3.79□□□□□ -1.8
Col28a1Q2UY11 Defa27-202ENSMUST00000168340 371 ntTSL 5 BASIC3.79□□□□□ -1.8
Col28a1Q2UY11 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC3.79□□□□□ -1.8
Col28a1Q2UY11 Gm20794-201ENSMUST00000177626 628 ntBASIC3.79□□□□□ -1.8
Col28a1Q2UY11 Gm23215-201ENSMUST00000178153 121 ntBASIC3.79□□□□□ -1.8
Col28a1Q2UY11 Gm23816-201ENSMUST00000179617 132 ntBASIC3.79□□□□□ -1.8
Col28a1Q2UY11 Gm27695-201ENSMUST00000184301 91 ntBASIC3.79□□□□□ -1.8
Col28a1Q2UY11 Gm5116-201ENSMUST00000187732 463 ntBASIC3.79□□□□□ -1.8
Col28a1Q2UY11 Gm29627-201ENSMUST00000187984 463 ntBASIC3.79□□□□□ -1.8
Col28a1Q2UY11 Gm38050-201ENSMUST00000191904 238 ntBASIC3.79□□□□□ -1.8
Col28a1Q2UY11 Ighv3-7-201ENSMUST00000193370 348 ntBASIC3.79□□□□□ -1.8
Col28a1Q2UY11 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC3.79□□□□□ -1.8
Col28a1Q2UY11 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC3.79□□□□□ -1.8
Col28a1Q2UY11 Gm43855-201ENSMUST00000197462 507 ntBASIC3.79□□□□□ -1.8
Col28a1Q2UY11 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC3.79□□□□□ -1.8
Col28a1Q2UY11 Gm44032-201ENSMUST00000204841 166 ntBASIC3.79□□□□□ -1.8
Col28a1Q2UY11 Gm44818-201ENSMUST00000206608 358 ntBASIC3.79□□□□□ -1.8
Col28a1Q2UY11 Gm44583-201ENSMUST00000207478 281 ntBASIC3.79□□□□□ -1.8
Col28a1Q2UY11 Gm7751-201ENSMUST00000212868 709 ntBASIC3.79□□□□□ -1.8
Col28a1Q2UY11 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC3.79□□□□□ -1.8
Col28a1Q2UY11 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC3.79□□□□□ -1.8
Col28a1Q2UY11 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC3.79□□□□□ -1.8
Col28a1Q2UY11 AC118006.1-201ENSMUST00000224211 501 ntBASIC3.79□□□□□ -1.8
Col28a1Q2UY11 Olfr1193-201ENSMUST00000081697 957 ntBASIC3.79□□□□□ -1.8
Col28a1Q2UY11 Gm25800-201ENSMUST00000082636 134 ntBASIC3.79□□□□□ -1.8
Col28a1Q2UY11 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Col28a1Q2UY11 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Col28a1Q2UY11 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Col28a1Q2UY11 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Col28a1Q2UY11 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Col28a1Q2UY11 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Col28a1Q2UY11 Gm15975-201ENSMUST00000122385 1402 ntBASIC3.78□□□□□ -1.8
Col28a1Q2UY11 Gm37006-201ENSMUST00000195253 2674 ntBASIC3.78□□□□□ -1.8
Col28a1Q2UY11 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Col28a1Q2UY11 Gm25213-201ENSMUST00000102388 113 ntBASIC3.78□□□□□ -1.8
Col28a1Q2UY11 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC3.78□□□□□ -1.8
Col28a1Q2UY11 Gm13672-201ENSMUST00000117554 459 ntBASIC3.78□□□□□ -1.8
Col28a1Q2UY11 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC3.78□□□□□ -1.8
Col28a1Q2UY11 Gm15387-201ENSMUST00000120421 648 ntBASIC3.78□□□□□ -1.8
Col28a1Q2UY11 Gm14605-201ENSMUST00000120599 268 ntBASIC3.78□□□□□ -1.8
Col28a1Q2UY11 Gm13356-201ENSMUST00000121678 335 ntBASIC3.78□□□□□ -1.8
Col28a1Q2UY11 Gm14564-201ENSMUST00000122159 294 ntBASIC3.78□□□□□ -1.8
Col28a1Q2UY11 Gm25781-201ENSMUST00000122527 84 ntBASIC3.78□□□□□ -1.8
Col28a1Q2UY11 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Col28a1Q2UY11 Gm24998-201ENSMUST00000157908 89 ntBASIC3.78□□□□□ -1.8
Col28a1Q2UY11 Gm23179-201ENSMUST00000158693 304 ntBASIC3.78□□□□□ -1.8
Col28a1Q2UY11 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC3.78□□□□□ -1.8
Col28a1Q2UY11 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Col28a1Q2UY11 Gm22242-201ENSMUST00000175224 118 ntBASIC3.78□□□□□ -1.8
Col28a1Q2UY11 Ang-ps2-201ENSMUST00000178173 433 ntBASIC3.78□□□□□ -1.8
Col28a1Q2UY11 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC3.78□□□□□ -1.8
Col28a1Q2UY11 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC3.78□□□□□ -1.8
Col28a1Q2UY11 Mir6238-201ENSMUST00000184140 129 ntBASIC3.78□□□□□ -1.8
Col28a1Q2UY11 Gm8296-201ENSMUST00000185597 524 ntBASIC3.78□□□□□ -1.8
Col28a1Q2UY11 Gm28418-201ENSMUST00000186179 423 ntBASIC3.78□□□□□ -1.8
Col28a1Q2UY11 Vmn2r-ps149-201ENSMUST00000188423 590 ntBASIC3.78□□□□□ -1.8
Col28a1Q2UY11 Gm37164-201ENSMUST00000192809 637 ntBASIC3.78□□□□□ -1.8
Col28a1Q2UY11 Gm33973-201ENSMUST00000195148 534 ntBASIC3.78□□□□□ -1.8
Col28a1Q2UY11 Gm44343-201ENSMUST00000196702 90 ntBASIC3.78□□□□□ -1.8
Col28a1Q2UY11 Gm4644-201ENSMUST00000197587 400 ntBASIC3.78□□□□□ -1.8
Col28a1Q2UY11 Gm44266-201ENSMUST00000205235 500 ntBASIC3.78□□□□□ -1.8
Col28a1Q2UY11 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Col28a1Q2UY11 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC3.78□□□□□ -1.8
Col28a1Q2UY11 AC152946.2-201ENSMUST00000219071 337 ntBASIC3.78□□□□□ -1.8
Col28a1Q2UY11 AC154506.1-201ENSMUST00000225178 621 ntBASIC3.78□□□□□ -1.8
Col28a1Q2UY11 Olfr1022-201ENSMUST00000054736 948 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Col28a1Q2UY11 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Col28a1Q2UY11 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Col28a1Q2UY11 Gm5518-201ENSMUST00000084171 648 ntBASIC3.78□□□□□ -1.8
Col28a1Q2UY11 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Col28a1Q2UY11 Gm9343-201ENSMUST00000209016 2609 ntBASIC3.78□□□□□ -1.8
Col28a1Q2UY11 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Col28a1Q2UY11 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
Col28a1Q2UY11 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC3.78□□□□□ -1.8
Col28a1Q2UY11 Gm3616-201ENSMUST00000174430 2514 ntBASIC3.78□□□□□ -1.8
Col28a1Q2UY11 Gm3683-201ENSMUST00000175701 2513 ntBASIC3.78□□□□□ -1.8
Col28a1Q2UY11 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Col28a1Q2UY11 Olfr38-202ENSMUST00000215796 2782 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Col28a1Q2UY11 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Col28a1Q2UY11 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
Col28a1Q2UY11 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Col28a1Q2UY11 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Col28a1Q2UY11 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC3.77□□□□□ -1.81
Col28a1Q2UY11 Gm43508-201ENSMUST00000197251 3783 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms