Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC3.21□□□□□ -1.9
Ptchd3Q0EEE2 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC3.21□□□□□ -1.9
Ptchd3Q0EEE2 Gm4761-201ENSMUST00000178086 582 ntBASIC3.21□□□□□ -1.9
Ptchd3Q0EEE2 Mir6385-201ENSMUST00000184295 105 ntBASIC3.21□□□□□ -1.9
Ptchd3Q0EEE2 Gm28148-201ENSMUST00000186924 697 ntBASIC3.21□□□□□ -1.9
Ptchd3Q0EEE2 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Ptchd3Q0EEE2 Gm34779-201ENSMUST00000210036 263 ntBASIC3.21□□□□□ -1.9
Ptchd3Q0EEE2 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Ptchd3Q0EEE2 AC091260.1-201ENSMUST00000216112 229 ntBASIC3.21□□□□□ -1.9
Ptchd3Q0EEE2 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC3.21□□□□□ -1.9
Ptchd3Q0EEE2 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC3.21□□□□□ -1.9
Ptchd3Q0EEE2 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC3.21□□□□□ -1.9
Ptchd3Q0EEE2 AC154788.1-201ENSMUST00000225003 340 ntBASIC3.21□□□□□ -1.9
Ptchd3Q0EEE2 AC133176.1-201ENSMUST00000226668 219 ntBASIC3.21□□□□□ -1.9
Ptchd3Q0EEE2 Vmn1r12-201ENSMUST00000073384 924 ntAPPRIS P2 BASIC3.21□□□□□ -1.9
Ptchd3Q0EEE2 n-R5s79-201ENSMUST00000083071 120 ntBASIC3.21□□□□□ -1.9
Ptchd3Q0EEE2 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
Ptchd3Q0EEE2 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
Ptchd3Q0EEE2 Gm45662-201ENSMUST00000210054 2098 ntBASIC3.21□□□□□ -1.9
Ptchd3Q0EEE2 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Ptchd3Q0EEE2 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Ptchd3Q0EEE2 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC3.2□□□□□ -1.9
Ptchd3Q0EEE2 Gm16216-201ENSMUST00000118970 1111 ntBASIC3.2□□□□□ -1.9
Ptchd3Q0EEE2 n-R5s32-201ENSMUST00000122495 103 ntBASIC3.2□□□□□ -1.9
Ptchd3Q0EEE2 Gm15733-201ENSMUST00000132957 242 ntBASIC3.2□□□□□ -1.9
Ptchd3Q0EEE2 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC3.2□□□□□ -1.9
Ptchd3Q0EEE2 Gm24505-201ENSMUST00000157682 126 ntBASIC3.2□□□□□ -1.9
Ptchd3Q0EEE2 Gm24241-201ENSMUST00000157787 145 ntBASIC3.2□□□□□ -1.9
Ptchd3Q0EEE2 Gm24998-201ENSMUST00000157908 89 ntBASIC3.2□□□□□ -1.9
Ptchd3Q0EEE2 Gm23666-201ENSMUST00000158053 116 ntBASIC3.2□□□□□ -1.9
Ptchd3Q0EEE2 Gm8267-202ENSMUST00000169062 1240 ntAPPRIS P2 TSL 5 BASIC3.2□□□□□ -1.9
Ptchd3Q0EEE2 Gm27659-201ENSMUST00000183472 98 ntBASIC3.2□□□□□ -1.9
Ptchd3Q0EEE2 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC3.2□□□□□ -1.9
Ptchd3Q0EEE2 Gm19224-201ENSMUST00000190477 793 ntBASIC3.2□□□□□ -1.9
Ptchd3Q0EEE2 Trbv12-3-201ENSMUST00000192675 372 ntBASIC3.2□□□□□ -1.9
Ptchd3Q0EEE2 Gm37213-201ENSMUST00000193077 586 ntBASIC3.2□□□□□ -1.9
Ptchd3Q0EEE2 Ighv1-41-201ENSMUST00000194414 329 ntBASIC3.2□□□□□ -1.9
Ptchd3Q0EEE2 Gm18748-201ENSMUST00000198507 622 ntBASIC3.2□□□□□ -1.9
Ptchd3Q0EEE2 Gm44030-201ENSMUST00000204865 432 ntBASIC3.2□□□□□ -1.9
Ptchd3Q0EEE2 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC3.2□□□□□ -1.9
Ptchd3Q0EEE2 Gm7751-201ENSMUST00000212868 709 ntBASIC3.2□□□□□ -1.9
Ptchd3Q0EEE2 AC145736.1-201ENSMUST00000214661 479 ntBASIC3.2□□□□□ -1.9
Ptchd3Q0EEE2 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Ptchd3Q0EEE2 AC164883.9-201ENSMUST00000228042 399 ntBASIC3.2□□□□□ -1.9
Ptchd3Q0EEE2 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Ptchd3Q0EEE2 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC3.2□□□□□ -1.9
Ptchd3Q0EEE2 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Ptchd3Q0EEE2 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Ptchd3Q0EEE2 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC3.2□□□□□ -1.9
Ptchd3Q0EEE2 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Ptchd3Q0EEE2 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Ptchd3Q0EEE2 Gm43715-201ENSMUST00000196307 2715 ntBASIC3.2□□□□□ -1.9
Ptchd3Q0EEE2 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Ptchd3Q0EEE2 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Ptchd3Q0EEE2 Gm14811-201ENSMUST00000117070 117 ntBASIC3.19□□□□□ -1.9
Ptchd3Q0EEE2 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC3.19□□□□□ -1.9
Ptchd3Q0EEE2 Mup-ps12-201ENSMUST00000126217 549 ntBASIC3.19□□□□□ -1.9
Ptchd3Q0EEE2 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
Ptchd3Q0EEE2 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
Ptchd3Q0EEE2 Gm24914-201ENSMUST00000157285 313 ntBASIC3.19□□□□□ -1.9
Ptchd3Q0EEE2 Gm23540-201ENSMUST00000157543 164 ntBASIC3.19□□□□□ -1.9
Ptchd3Q0EEE2 Nron-204ENSMUST00000158971 370 ntBASIC3.19□□□□□ -1.9
Ptchd3Q0EEE2 Ear-ps3-201ENSMUST00000168308 445 ntBASIC3.19□□□□□ -1.9
Ptchd3Q0EEE2 Ang-ps2-201ENSMUST00000178173 433 ntBASIC3.19□□□□□ -1.9
Ptchd3Q0EEE2 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Ptchd3Q0EEE2 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC3.19□□□□□ -1.9
Ptchd3Q0EEE2 Gm29740-201ENSMUST00000193182 655 ntBASIC3.19□□□□□ -1.9
Ptchd3Q0EEE2 Gm29704-201ENSMUST00000196011 253 ntBASIC3.19□□□□□ -1.9
Ptchd3Q0EEE2 Gm9023-201ENSMUST00000198408 1038 ntBASIC3.19□□□□□ -1.9
Ptchd3Q0EEE2 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC3.19□□□□□ -1.9
Ptchd3Q0EEE2 Gm45742-201ENSMUST00000212400 433 ntBASIC3.19□□□□□ -1.9
Ptchd3Q0EEE2 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Ptchd3Q0EEE2 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC3.19□□□□□ -1.9
Ptchd3Q0EEE2 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Ptchd3Q0EEE2 AC132465.3-201ENSMUST00000219326 195 ntBASIC3.19□□□□□ -1.9
Ptchd3Q0EEE2 AC141642.1-201ENSMUST00000220598 229 ntBASIC3.19□□□□□ -1.9
Ptchd3Q0EEE2 Gm7119-201ENSMUST00000221345 695 ntBASIC3.19□□□□□ -1.9
Ptchd3Q0EEE2 CT009550.5-201ENSMUST00000226286 382 ntBASIC3.19□□□□□ -1.9
Ptchd3Q0EEE2 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Ptchd3Q0EEE2 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Ptchd3Q0EEE2 Olfr167-201ENSMUST00000054606 939 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Ptchd3Q0EEE2 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Ptchd3Q0EEE2 Olfr193-201ENSMUST00000076262 1009 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Ptchd3Q0EEE2 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Ptchd3Q0EEE2 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
Ptchd3Q0EEE2 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Ptchd3Q0EEE2 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
Ptchd3Q0EEE2 Gm5362-201ENSMUST00000211968 3085 ntBASIC3.18□□□□□ -1.9
Ptchd3Q0EEE2 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC3.18□□□□□ -1.9
Ptchd3Q0EEE2 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Ptchd3Q0EEE2 Gm38211-201ENSMUST00000192814 7217 ntBASIC3.18□□□□□ -1.9
Ptchd3Q0EEE2 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Ptchd3Q0EEE2 Gm23691-201ENSMUST00000101878 107 ntBASIC3.18□□□□□ -1.9
Ptchd3Q0EEE2 Gm12149-201ENSMUST00000117511 654 ntBASIC3.18□□□□□ -1.9
Ptchd3Q0EEE2 Gm14007-201ENSMUST00000118288 210 ntBASIC3.18□□□□□ -1.9
Ptchd3Q0EEE2 Mup-ps14-201ENSMUST00000118437 532 ntBASIC3.18□□□□□ -1.9
Ptchd3Q0EEE2 Gm13717-201ENSMUST00000119868 365 ntBASIC3.18□□□□□ -1.9
Ptchd3Q0EEE2 Gm5646-201ENSMUST00000120568 714 ntBASIC3.18□□□□□ -1.9
Ptchd3Q0EEE2 Gm2005-201ENSMUST00000120759 542 ntBASIC3.18□□□□□ -1.9
Ptchd3Q0EEE2 Mup-ps2-201ENSMUST00000142602 533 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms