Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
Col17a1Q07563 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.49
Col17a1Q07563 Gm12881-201ENSMUST00000121191 203 ntBASIC5.71□□□□□ -1.49
Col17a1Q07563 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC5.71□□□□□ -1.49
Col17a1Q07563 Gm23123-201ENSMUST00000157648 144 ntBASIC5.71□□□□□ -1.49
Col17a1Q07563 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
Col17a1Q07563 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Col17a1Q07563 Gm27645-201ENSMUST00000183348 77 ntBASIC5.71□□□□□ -1.49
Col17a1Q07563 Gm37523-201ENSMUST00000194901 412 ntBASIC5.71□□□□□ -1.49
Col17a1Q07563 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC5.71□□□□□ -1.49
Col17a1Q07563 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC5.71□□□□□ -1.49
Col17a1Q07563 Gm35558-202ENSMUST00000221819 499 ntBASIC5.71□□□□□ -1.49
Col17a1Q07563 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
Col17a1Q07563 Gm26108-201ENSMUST00000083973 191 ntBASIC5.71□□□□□ -1.49
Col17a1Q07563 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Col17a1Q07563 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Col17a1Q07563 Vmn1r39-203ENSMUST00000227285 2245 ntAPPRIS ALT2 BASIC5.71□□□□□ -1.5
Col17a1Q07563 Gm19335-201ENSMUST00000195836 2069 ntBASIC5.71□□□□□ -1.5
Col17a1Q07563 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col17a1Q07563 AC156025.1-201ENSMUST00000223597 3551 ntBASIC5.71□□□□□ -1.5
Col17a1Q07563 Gm36298-201ENSMUST00000223394 1732 ntBASIC5.71□□□□□ -1.5
Col17a1Q07563 Mir1903-201ENSMUST00000122574 80 ntBASIC5.71□□□□□ -1.5
Col17a1Q07563 Gm22219-201ENSMUST00000157562 319 ntBASIC5.71□□□□□ -1.5
Col17a1Q07563 Gm23068-201ENSMUST00000158239 293 ntBASIC5.71□□□□□ -1.5
Col17a1Q07563 Gm22666-201ENSMUST00000158717 164 ntBASIC5.71□□□□□ -1.5
Col17a1Q07563 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC5.71□□□□□ -1.5
Col17a1Q07563 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col17a1Q07563 Gm9593-201ENSMUST00000166034 469 ntBASIC5.71□□□□□ -1.5
Col17a1Q07563 Gm7870-201ENSMUST00000184467 616 ntBASIC5.71□□□□□ -1.5
Col17a1Q07563 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC5.71□□□□□ -1.5
Col17a1Q07563 Gm25203-202ENSMUST00000200458 216 ntBASIC5.71□□□□□ -1.5
Col17a1Q07563 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC5.71□□□□□ -1.5
Col17a1Q07563 Olfr906-201ENSMUST00000045493 936 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Col17a1Q07563 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC5.71□□□□□ -1.5
Col17a1Q07563 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Col17a1Q07563 Gm25203-201ENSMUST00000082842 215 ntBASIC5.71□□□□□ -1.5
Col17a1Q07563 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col17a1Q07563 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Col17a1Q07563 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Col17a1Q07563 Gm12102-201ENSMUST00000118251 604 ntBASIC5.7□□□□□ -1.5
Col17a1Q07563 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Col17a1Q07563 Gm17187-201ENSMUST00000164622 410 ntBASIC5.7□□□□□ -1.5
Col17a1Q07563 Gm4468-201ENSMUST00000170206 294 ntBASIC5.7□□□□□ -1.5
Col17a1Q07563 Gm28016-201ENSMUST00000184594 196 ntBASIC5.7□□□□□ -1.5
Col17a1Q07563 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Col17a1Q07563 Gm28629-201ENSMUST00000187309 263 ntBASIC5.7□□□□□ -1.5
Col17a1Q07563 Gm43464-201ENSMUST00000198003 317 ntTSL 3 BASIC5.7□□□□□ -1.5
Col17a1Q07563 Gm6105-201ENSMUST00000200580 624 ntBASIC5.7□□□□□ -1.5
Col17a1Q07563 Gm45312-201ENSMUST00000210566 311 ntBASIC5.7□□□□□ -1.5
Col17a1Q07563 Gm18557-201ENSMUST00000218710 433 ntBASIC5.7□□□□□ -1.5
Col17a1Q07563 AC166113.1-201ENSMUST00000225258 475 ntBASIC5.7□□□□□ -1.5
Col17a1Q07563 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col17a1Q07563 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Col17a1Q07563 Macf1-205ENSMUST00000106220 17608 ntTSL 5 BASIC5.69□□□□□ -1.5
Col17a1Q07563 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Col17a1Q07563 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC5.69□□□□□ -1.5
Col17a1Q07563 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col17a1Q07563 4930519E07Rik-201ENSMUST00000200907 1665 ntBASIC5.69□□□□□ -1.5
Col17a1Q07563 Gm20631-201ENSMUST00000177239 5697 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Col17a1Q07563 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col17a1Q07563 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC5.69□□□□□ -1.5
Col17a1Q07563 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC5.69□□□□□ -1.5
Col17a1Q07563 Gm12876-201ENSMUST00000120975 408 ntBASIC5.69□□□□□ -1.5
Col17a1Q07563 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC5.69□□□□□ -1.5
Col17a1Q07563 Gm13773-201ENSMUST00000156693 583 ntTSL 3 BASIC5.69□□□□□ -1.5
Col17a1Q07563 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC5.69□□□□□ -1.5
Col17a1Q07563 Gm23141-201ENSMUST00000178682 94 ntBASIC5.69□□□□□ -1.5
Col17a1Q07563 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC5.69□□□□□ -1.5
Col17a1Q07563 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC5.69□□□□□ -1.5
Col17a1Q07563 Gm38334-201ENSMUST00000195060 313 ntBASIC5.69□□□□□ -1.5
Col17a1Q07563 Gm44373-201ENSMUST00000196112 169 ntBASIC5.69□□□□□ -1.5
Col17a1Q07563 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Col17a1Q07563 Gm45689-201ENSMUST00000210522 133 ntBASIC5.69□□□□□ -1.5
Col17a1Q07563 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC5.69□□□□□ -1.5
Col17a1Q07563 Gm35552-201ENSMUST00000214355 396 ntTSL 5 BASIC5.69□□□□□ -1.5
Col17a1Q07563 AC154506.1-201ENSMUST00000225178 621 ntBASIC5.69□□□□□ -1.5
Col17a1Q07563 AC151907.1-201ENSMUST00000228812 412 ntBASIC5.69□□□□□ -1.5
Col17a1Q07563 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col17a1Q07563 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Col17a1Q07563 Cnot6l-210ENSMUST00000155901 8564 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col17a1Q07563 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Col17a1Q07563 Zfp11-201ENSMUST00000049778 3929 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col17a1Q07563 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Col17a1Q07563 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Col17a1Q07563 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Col17a1Q07563 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC5.68□□□□□ -1.5
Col17a1Q07563 1700061H18Rik-202ENSMUST00000147221 564 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Col17a1Q07563 Gm22911-201ENSMUST00000177920 107 ntBASIC5.68□□□□□ -1.5
Col17a1Q07563 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC5.68□□□□□ -1.5
Col17a1Q07563 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC5.68□□□□□ -1.5
Col17a1Q07563 Gm29668-201ENSMUST00000187802 315 ntBASIC5.68□□□□□ -1.5
Col17a1Q07563 Gm18704-201ENSMUST00000219736 446 ntBASIC5.68□□□□□ -1.5
Col17a1Q07563 Gm4052-201ENSMUST00000220890 451 ntBASIC5.68□□□□□ -1.5
Col17a1Q07563 CT010506.3-201ENSMUST00000223699 410 ntBASIC5.68□□□□□ -1.5
Col17a1Q07563 AC154600.1-201ENSMUST00000226480 714 ntBASIC5.68□□□□□ -1.5
Col17a1Q07563 Ccdc144b-201ENSMUST00000166644 1685 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Col17a1Q07563 Gm37848-201ENSMUST00000195288 3103 ntBASIC5.68□□□□□ -1.5
Col17a1Q07563 Gm18913-201ENSMUST00000204311 1789 ntBASIC5.68□□□□□ -1.5
Col17a1Q07563 2410012E07Rik-201ENSMUST00000190896 1357 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Col17a1Q07563 Olfr1273-ps-201ENSMUST00000214356 4698 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 271.9 ms