Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Col6a1Q04857 Agbl1-201ENSMUST00000026854 3452 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
Col6a1Q04857 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC5.12□□□□□ -1.59
Col6a1Q04857 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Col6a1Q04857 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Col6a1Q04857 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC5.12□□□□□ -1.59
Col6a1Q04857 Gm23941-201ENSMUST00000101953 107 ntBASIC5.12□□□□□ -1.59
Col6a1Q04857 Gm15951-201ENSMUST00000118377 400 ntBASIC5.12□□□□□ -1.59
Col6a1Q04857 Gm14570-201ENSMUST00000119444 391 ntBASIC5.12□□□□□ -1.59
Col6a1Q04857 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
Col6a1Q04857 Gm15799-201ENSMUST00000120899 289 ntBASIC5.12□□□□□ -1.59
Col6a1Q04857 Gm22986-201ENSMUST00000122753 130 ntBASIC5.12□□□□□ -1.59
Col6a1Q04857 Gm24689-201ENSMUST00000157760 104 ntBASIC5.12□□□□□ -1.59
Col6a1Q04857 Gm24546-201ENSMUST00000158652 102 ntBASIC5.12□□□□□ -1.59
Col6a1Q04857 Gm25643-201ENSMUST00000158874 103 ntBASIC5.12□□□□□ -1.59
Col6a1Q04857 Gm24713-201ENSMUST00000178850 107 ntBASIC5.12□□□□□ -1.59
Col6a1Q04857 Gm22633-201ENSMUST00000179834 107 ntBASIC5.12□□□□□ -1.59
Col6a1Q04857 Gm25448-201ENSMUST00000180065 107 ntBASIC5.12□□□□□ -1.59
Col6a1Q04857 Gm28654-201ENSMUST00000189801 379 ntBASIC5.12□□□□□ -1.59
Col6a1Q04857 Ighv12-2-201ENSMUST00000191949 362 ntBASIC5.12□□□□□ -1.59
Col6a1Q04857 Ighv1-6-201ENSMUST00000193849 293 ntBASIC5.12□□□□□ -1.59
Col6a1Q04857 Ighv1-40-201ENSMUST00000194231 345 ntBASIC5.12□□□□□ -1.59
Col6a1Q04857 Trbv11-201ENSMUST00000194354 260 ntBASIC5.12□□□□□ -1.59
Col6a1Q04857 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC5.12□□□□□ -1.59
Col6a1Q04857 Olfr673-ps1-201ENSMUST00000210859 411 ntBASIC5.12□□□□□ -1.59
Col6a1Q04857 AC167229.1-201ENSMUST00000220057 469 ntBASIC5.12□□□□□ -1.59
Col6a1Q04857 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC5.12□□□□□ -1.59
Col6a1Q04857 AC154552.1-201ENSMUST00000222969 202 ntBASIC5.12□□□□□ -1.59
Col6a1Q04857 Gm23451-201ENSMUST00000083328 122 ntBASIC5.12□□□□□ -1.59
Col6a1Q04857 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Col6a1Q04857 Pgap1-201ENSMUST00000097739 10583 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Col6a1Q04857 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Col6a1Q04857 Olfr32-204ENSMUST00000215153 3117 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
Col6a1Q04857 Gm20345-201ENSMUST00000175839 2414 ntBASIC5.12□□□□□ -1.59
Col6a1Q04857 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC5.11□□□□□ -1.59
Col6a1Q04857 Gm37900-201ENSMUST00000195510 3805 ntBASIC5.11□□□□□ -1.59
Col6a1Q04857 AC165106.3-201ENSMUST00000228191 3843 ntBASIC5.11□□□□□ -1.59
Col6a1Q04857 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Col6a1Q04857 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Col6a1Q04857 AC101945.4-201ENSMUST00000228464 1976 ntBASIC5.11□□□□□ -1.59
Col6a1Q04857 Olfr1118-202ENSMUST00000216396 4976 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Col6a1Q04857 Olfr235-204ENSMUST00000214613 2217 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
Col6a1Q04857 2700016F22Rik-201ENSMUST00000181556 3605 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Col6a1Q04857 Gm12805-201ENSMUST00000117305 1048 ntBASIC5.11□□□□□ -1.59
Col6a1Q04857 Gm15058-201ENSMUST00000117689 458 ntBASIC5.11□□□□□ -1.59
Col6a1Q04857 Gm13132-201ENSMUST00000121194 472 ntBASIC5.11□□□□□ -1.59
Col6a1Q04857 Gm15147-201ENSMUST00000122263 483 ntBASIC5.11□□□□□ -1.59
Col6a1Q04857 Gm22843-201ENSMUST00000157710 134 ntBASIC5.11□□□□□ -1.59
Col6a1Q04857 Gm20657-201ENSMUST00000177079 515 ntBASIC5.11□□□□□ -1.59
Col6a1Q04857 Gm42428-201ENSMUST00000198677 302 ntBASIC5.11□□□□□ -1.59
Col6a1Q04857 Gm44419-201ENSMUST00000203338 229 ntBASIC5.11□□□□□ -1.59
Col6a1Q04857 AC153954.2-201ENSMUST00000213811 287 ntBASIC5.11□□□□□ -1.59
Col6a1Q04857 AC158803.1-201ENSMUST00000219495 316 ntBASIC5.11□□□□□ -1.59
Col6a1Q04857 AC154576.1-201ENSMUST00000225864 563 ntBASIC5.11□□□□□ -1.59
Col6a1Q04857 Olfr437-201ENSMUST00000060243 1018 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Col6a1Q04857 Gm10042-201ENSMUST00000079884 78 ntBASIC5.11□□□□□ -1.59
Col6a1Q04857 Gm26165-201ENSMUST00000083791 138 ntBASIC5.11□□□□□ -1.59
Col6a1Q04857 Gm5591-201ENSMUST00000079759 3441 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Col6a1Q04857 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Col6a1Q04857 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Col6a1Q04857 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Col6a1Q04857 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Col6a1Q04857 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Col6a1Q04857 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Col6a1Q04857 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Col6a1Q04857 Pof1b-201ENSMUST00000039887 3886 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Col6a1Q04857 Map3k19-201ENSMUST00000061512 3936 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
Col6a1Q04857 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Col6a1Q04857 Gm22269-201ENSMUST00000104002 130 ntBASIC5.1□□□□□ -1.59
Col6a1Q04857 Gm12683-201ENSMUST00000117528 415 ntBASIC5.1□□□□□ -1.59
Col6a1Q04857 Gm13239-201ENSMUST00000119920 637 ntBASIC5.1□□□□□ -1.59
Col6a1Q04857 Gm11623-201ENSMUST00000120176 1225 ntBASIC5.1□□□□□ -1.59
Col6a1Q04857 Gm11582-201ENSMUST00000121041 236 ntBASIC5.1□□□□□ -1.59
Col6a1Q04857 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC5.1□□□□□ -1.59
Col6a1Q04857 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC5.1□□□□□ -1.59
Col6a1Q04857 Gm25666-201ENSMUST00000157702 107 ntBASIC5.1□□□□□ -1.59
Col6a1Q04857 Gm23545-201ENSMUST00000158205 104 ntBASIC5.1□□□□□ -1.59
Col6a1Q04857 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Col6a1Q04857 Gm24100-201ENSMUST00000178592 79 ntBASIC5.1□□□□□ -1.59
Col6a1Q04857 Gm25361-201ENSMUST00000179358 76 ntBASIC5.1□□□□□ -1.59
Col6a1Q04857 Gm25939-201ENSMUST00000179876 191 ntBASIC5.1□□□□□ -1.59
Col6a1Q04857 Gm24137-201ENSMUST00000180055 79 ntBASIC5.1□□□□□ -1.59
Col6a1Q04857 Gm22391-201ENSMUST00000180356 79 ntBASIC5.1□□□□□ -1.59
Col6a1Q04857 Gm38125-201ENSMUST00000194136 3438 ntBASIC5.1□□□□□ -1.59
Col6a1Q04857 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC5.1□□□□□ -1.59
Col6a1Q04857 Gm44261-201ENSMUST00000203337 209 ntBASIC5.1□□□□□ -1.59
Col6a1Q04857 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Col6a1Q04857 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Col6a1Q04857 AC124346.1-201ENSMUST00000218539 364 ntBASIC5.1□□□□□ -1.59
Col6a1Q04857 AC099578.1-201ENSMUST00000220147 435 ntBASIC5.1□□□□□ -1.59
Col6a1Q04857 CT009713.4-201ENSMUST00000224246 272 ntBASIC5.1□□□□□ -1.59
Col6a1Q04857 AC173482.4-201ENSMUST00000225096 348 ntBASIC5.1□□□□□ -1.59
Col6a1Q04857 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Col6a1Q04857 Gm23455-201ENSMUST00000083331 100 ntBASIC5.1□□□□□ -1.59
Col6a1Q04857 Mir193a-201ENSMUST00000083461 66 ntBASIC5.1□□□□□ -1.59
Col6a1Q04857 n-R5s3-201ENSMUST00000083879 112 ntBASIC5.1□□□□□ -1.59
Col6a1Q04857 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Col6a1Q04857 Gm43312-201ENSMUST00000201655 2466 ntBASIC5.09□□□□□ -1.59
Col6a1Q04857 Pde1a-204ENSMUST00000102653 2439 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Col6a1Q04857 Gm44860-201ENSMUST00000208473 2346 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 100.5 ms