Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Usp4P35123 Snord66-201ENSMUST00000104051 75 ntBASIC4.6□□□□□ -1.67
Usp4P35123 Gm23594-201ENSMUST00000104307 134 ntBASIC4.6□□□□□ -1.67
Usp4P35123 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC4.6□□□□□ -1.67
Usp4P35123 Gm11221-201ENSMUST00000117230 597 ntBASIC4.6□□□□□ -1.67
Usp4P35123 Gm14067-201ENSMUST00000119340 314 ntBASIC4.6□□□□□ -1.67
Usp4P35123 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC4.6□□□□□ -1.67
Usp4P35123 Gm23463-201ENSMUST00000122468 99 ntBASIC4.6□□□□□ -1.67
Usp4P35123 Gm25106-201ENSMUST00000122672 134 ntBASIC4.6□□□□□ -1.67
Usp4P35123 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC4.6□□□□□ -1.67
Usp4P35123 Gm24751-201ENSMUST00000157844 102 ntBASIC4.6□□□□□ -1.67
Usp4P35123 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC4.6□□□□□ -1.67
Usp4P35123 Gm23191-201ENSMUST00000179147 107 ntBASIC4.6□□□□□ -1.67
Usp4P35123 Gm24968-201ENSMUST00000179817 107 ntBASIC4.6□□□□□ -1.67
Usp4P35123 Gm26180-201ENSMUST00000179942 107 ntBASIC4.6□□□□□ -1.67
Usp4P35123 Gm27165-201ENSMUST00000183951 232 ntBASIC4.6□□□□□ -1.67
Usp4P35123 Gm27568-201ENSMUST00000184220 99 ntBASIC4.6□□□□□ -1.67
Usp4P35123 Gm27611-201ENSMUST00000184690 108 ntBASIC4.6□□□□□ -1.67
Usp4P35123 Gm28552-201ENSMUST00000190725 388 ntBASIC4.6□□□□□ -1.67
Usp4P35123 Gm5660-201ENSMUST00000197453 1149 ntBASIC4.6□□□□□ -1.67
Usp4P35123 Gm43407-201ENSMUST00000199816 317 ntBASIC4.6□□□□□ -1.67
Usp4P35123 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC4.6□□□□□ -1.67
Usp4P35123 Olfr747-202ENSMUST00000205373 1132 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Usp4P35123 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC4.6□□□□□ -1.67
Usp4P35123 AC152979.1-201ENSMUST00000218214 289 ntBASIC4.6□□□□□ -1.67
Usp4P35123 CT571268.1-201ENSMUST00000222320 407 ntBASIC4.6□□□□□ -1.67
Usp4P35123 AC154521.1-201ENSMUST00000222635 330 ntBASIC4.6□□□□□ -1.67
Usp4P35123 Gm6988-201ENSMUST00000222676 375 ntBASIC4.6□□□□□ -1.67
Usp4P35123 CT030705.1-201ENSMUST00000223971 533 ntBASIC4.6□□□□□ -1.67
Usp4P35123 AC154788.1-201ENSMUST00000225003 340 ntBASIC4.6□□□□□ -1.67
Usp4P35123 AC112935.1-201ENSMUST00000227603 250 ntBASIC4.6□□□□□ -1.67
Usp4P35123 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Usp4P35123 Snord68-201ENSMUST00000082516 86 ntBASIC4.6□□□□□ -1.67
Usp4P35123 Gm23677-201ENSMUST00000083156 104 ntBASIC4.6□□□□□ -1.67
Usp4P35123 Mir28a-201ENSMUST00000083560 86 ntBASIC4.6□□□□□ -1.67
Usp4P35123 Gm23848-201ENSMUST00000083826 106 ntBASIC4.6□□□□□ -1.67
Usp4P35123 Gm24031-201ENSMUST00000083930 131 ntBASIC4.6□□□□□ -1.67
Usp4P35123 Gm38010-201ENSMUST00000192592 2784 ntBASIC4.6□□□□□ -1.67
Usp4P35123 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Usp4P35123 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Usp4P35123 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Usp4P35123 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Usp4P35123 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
Usp4P35123 Gm24889-201ENSMUST00000104388 132 ntBASIC4.59□□□□□ -1.67
Usp4P35123 Gm22493-201ENSMUST00000104494 132 ntBASIC4.59□□□□□ -1.67
Usp4P35123 Gm14355-201ENSMUST00000117352 264 ntBASIC4.59□□□□□ -1.67
Usp4P35123 Gm15206-201ENSMUST00000119143 454 ntBASIC4.59□□□□□ -1.67
Usp4P35123 Gm14586-201ENSMUST00000119571 408 ntBASIC4.59□□□□□ -1.67
Usp4P35123 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC4.59□□□□□ -1.67
Usp4P35123 Gm4912-201ENSMUST00000122212 1044 ntBASIC4.59□□□□□ -1.67
Usp4P35123 Gm14333-201ENSMUST00000130484 264 ntBASIC4.59□□□□□ -1.67
Usp4P35123 Gm22085-201ENSMUST00000158344 110 ntBASIC4.59□□□□□ -1.67
Usp4P35123 Gm20673-201ENSMUST00000177167 430 ntBASIC4.59□□□□□ -1.67
Usp4P35123 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Usp4P35123 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Usp4P35123 Gm26760-201ENSMUST00000181901 1604 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Usp4P35123 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
Usp4P35123 Mir6933-201ENSMUST00000184982 81 ntBASIC4.59□□□□□ -1.67
Usp4P35123 Gm4854-201ENSMUST00000185902 574 ntBASIC4.59□□□□□ -1.67
Usp4P35123 Gm42616-201ENSMUST00000198989 4184 ntBASIC4.59□□□□□ -1.67
Usp4P35123 Gm43925-201ENSMUST00000203498 206 ntBASIC4.59□□□□□ -1.67
Usp4P35123 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Usp4P35123 Gm45814-201ENSMUST00000212646 775 ntBASIC4.59□□□□□ -1.67
Usp4P35123 AC166358.7-201ENSMUST00000221132 108 ntBASIC4.59□□□□□ -1.67
Usp4P35123 AC125543.5-201ENSMUST00000222799 108 ntBASIC4.59□□□□□ -1.67
Usp4P35123 Gm23875-201ENSMUST00000083711 318 ntBASIC4.59□□□□□ -1.67
Usp4P35123 Ceacam11-201ENSMUST00000094799 1054 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Usp4P35123 Fgd4-206ENSMUST00000161861 8342 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Usp4P35123 Olfr788-202ENSMUST00000213222 4747 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
Usp4P35123 Gm11251-201ENSMUST00000119593 2800 ntBASIC4.59□□□□□ -1.68
Usp4P35123 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
Usp4P35123 Gm43200-201ENSMUST00000200385 2161 ntBASIC4.58□□□□□ -1.68
Usp4P35123 Gm37652-201ENSMUST00000195290 2095 ntBASIC4.58□□□□□ -1.68
Usp4P35123 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC4.58□□□□□ -1.68
Usp4P35123 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Usp4P35123 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Usp4P35123 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Usp4P35123 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC4.58□□□□□ -1.68
Usp4P35123 AC122887.2-201ENSMUST00000219465 1603 ntBASIC4.58□□□□□ -1.68
Usp4P35123 AC154329.1-201ENSMUST00000224408 3129 ntBASIC4.58□□□□□ -1.68
Usp4P35123 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC4.58□□□□□ -1.68
Usp4P35123 Gm43844-201ENSMUST00000202926 5605 ntBASIC4.58□□□□□ -1.68
Usp4P35123 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Usp4P35123 Gm15752-201ENSMUST00000117427 394 ntBASIC4.58□□□□□ -1.68
Usp4P35123 Gm12509-201ENSMUST00000118033 609 ntBASIC4.58□□□□□ -1.68
Usp4P35123 Gm6062-201ENSMUST00000120462 631 ntBASIC4.58□□□□□ -1.68
Usp4P35123 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC4.58□□□□□ -1.68
Usp4P35123 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC4.58□□□□□ -1.68
Usp4P35123 Hba-ps4-201ENSMUST00000128900 447 ntBASIC4.58□□□□□ -1.68
Usp4P35123 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC4.58□□□□□ -1.68
Usp4P35123 Gm23960-201ENSMUST00000157206 131 ntBASIC4.58□□□□□ -1.68
Usp4P35123 Gm24507-201ENSMUST00000157683 134 ntBASIC4.58□□□□□ -1.68
Usp4P35123 Gm24537-201ENSMUST00000157950 102 ntBASIC4.58□□□□□ -1.68
Usp4P35123 Gm23542-201ENSMUST00000158208 96 ntBASIC4.58□□□□□ -1.68
Usp4P35123 Gm6264-202ENSMUST00000162896 1217 ntBASIC4.58□□□□□ -1.68
Usp4P35123 Gm21850-201ENSMUST00000179792 359 ntBASIC4.58□□□□□ -1.68
Usp4P35123 Mir6960-201ENSMUST00000183449 61 ntBASIC4.58□□□□□ -1.68
Usp4P35123 Gm5368-201ENSMUST00000189012 589 ntBASIC4.58□□□□□ -1.68
Usp4P35123 Gm42566-201ENSMUST00000197120 643 ntBASIC4.58□□□□□ -1.68
Usp4P35123 Gm43144-201ENSMUST00000198256 485 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms