Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 AC154510.1-201ENSMUST00000223925 737 ntBASIC2.95□□□□□ -1.94
Col2a1P28481 AC102352.1-201ENSMUST00000224187 582 ntBASIC2.95□□□□□ -1.94
Col2a1P28481 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC2.95□□□□□ -1.94
Col2a1P28481 Olfr1317-203ENSMUST00000214801 2578 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Col2a1P28481 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
Col2a1P28481 Gm13080-201ENSMUST00000120556 420 ntBASIC2.94□□□□□ -1.94
Col2a1P28481 Gm16359-201ENSMUST00000124511 289 ntBASIC2.94□□□□□ -1.94
Col2a1P28481 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC2.94□□□□□ -1.94
Col2a1P28481 Gm24075-201ENSMUST00000158175 72 ntBASIC2.94□□□□□ -1.94
Col2a1P28481 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC2.94□□□□□ -1.94
Col2a1P28481 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC2.94□□□□□ -1.94
Col2a1P28481 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Col2a1P28481 Gm9541-201ENSMUST00000188409 502 ntBASIC2.94□□□□□ -1.94
Col2a1P28481 Gm5268-201ENSMUST00000189212 940 ntBASIC2.94□□□□□ -1.94
Col2a1P28481 Gm37193-201ENSMUST00000193087 513 ntBASIC2.94□□□□□ -1.94
Col2a1P28481 Gm20948-201ENSMUST00000211091 449 ntBASIC2.94□□□□□ -1.94
Col2a1P28481 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Col2a1P28481 AC124399.1-201ENSMUST00000218334 590 ntBASIC2.94□□□□□ -1.94
Col2a1P28481 CT571256.1-201ENSMUST00000226045 585 ntBASIC2.94□□□□□ -1.94
Col2a1P28481 Olfr1022-201ENSMUST00000054736 948 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Col2a1P28481 Olfr1014-201ENSMUST00000076250 918 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Col2a1P28481 Snord21-201ENSMUST00000082519 94 ntBASIC2.94□□□□□ -1.94
Col2a1P28481 Mir127-201ENSMUST00000093568 70 ntBASIC2.94□□□□□ -1.94
Col2a1P28481 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Col2a1P28481 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC2.94□□□□□ -1.94
Col2a1P28481 AC115891.1-201ENSMUST00000215798 1755 ntBASIC2.94□□□□□ -1.94
Col2a1P28481 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Col2a1P28481 Gm43256-201ENSMUST00000199995 3091 ntBASIC2.94□□□□□ -1.94
Col2a1P28481 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC2.93□□□□□ -1.94
Col2a1P28481 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Col2a1P28481 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.93□□□□□ -1.94
Col2a1P28481 Gm23424-201ENSMUST00000103889 110 ntBASIC2.93□□□□□ -1.94
Col2a1P28481 Mier1-203ENSMUST00000106855 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
Col2a1P28481 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC2.93□□□□□ -1.94
Col2a1P28481 Gm14623-201ENSMUST00000121398 603 ntBASIC2.93□□□□□ -1.94
Col2a1P28481 Gm24840-201ENSMUST00000122603 147 ntBASIC2.93□□□□□ -1.94
Col2a1P28481 Gm23889-201ENSMUST00000122689 104 ntBASIC2.93□□□□□ -1.94
Col2a1P28481 Gm23230-201ENSMUST00000157298 133 ntBASIC2.93□□□□□ -1.94
Col2a1P28481 Gm15974-201ENSMUST00000159103 531 ntBASIC2.93□□□□□ -1.94
Col2a1P28481 Gm17038-201ENSMUST00000166586 494 ntBASIC2.93□□□□□ -1.94
Col2a1P28481 Mir1264-201ENSMUST00000175381 86 ntBASIC2.93□□□□□ -1.94
Col2a1P28481 Gm27959-201ENSMUST00000185172 111 ntBASIC2.93□□□□□ -1.94
Col2a1P28481 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
Col2a1P28481 Gm2719-201ENSMUST00000191929 444 ntBASIC2.93□□□□□ -1.94
Col2a1P28481 Gm37946-201ENSMUST00000192064 347 ntBASIC2.93□□□□□ -1.94
Col2a1P28481 Gm38311-201ENSMUST00000192945 165 ntBASIC2.93□□□□□ -1.94
Col2a1P28481 Mir703-201ENSMUST00000197105 109 ntBASIC2.93□□□□□ -1.94
Col2a1P28481 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
Col2a1P28481 Gm45830-201ENSMUST00000212945 344 ntTSL 5 BASIC2.93□□□□□ -1.94
Col2a1P28481 Gm33091-201ENSMUST00000217798 748 ntTSL 3 BASIC2.93□□□□□ -1.94
Col2a1P28481 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
Col2a1P28481 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC2.93□□□□□ -1.94
Col2a1P28481 CT009713.4-201ENSMUST00000224246 272 ntBASIC2.93□□□□□ -1.94
Col2a1P28481 AC107663.3-201ENSMUST00000225873 601 ntBASIC2.93□□□□□ -1.94
Col2a1P28481 Il1f8-201ENSMUST00000028363 1217 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Col2a1P28481 Gm5471-201ENSMUST00000072732 337 ntBASIC2.93□□□□□ -1.94
Col2a1P28481 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
Col2a1P28481 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Col2a1P28481 Gm42852-201ENSMUST00000202649 1379 ntBASIC2.93□□□□□ -1.94
Col2a1P28481 Gm13756-201ENSMUST00000117618 222 ntBASIC2.92□□□□□ -1.94
Col2a1P28481 Gm12889-201ENSMUST00000118684 241 ntBASIC2.92□□□□□ -1.94
Col2a1P28481 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC2.92□□□□□ -1.94
Col2a1P28481 Gm23048-201ENSMUST00000157237 129 ntBASIC2.92□□□□□ -1.94
Col2a1P28481 Gm26411-201ENSMUST00000157668 107 ntBASIC2.92□□□□□ -1.94
Col2a1P28481 Gm24960-201ENSMUST00000157923 90 ntBASIC2.92□□□□□ -1.94
Col2a1P28481 Gm26354-201ENSMUST00000158221 129 ntBASIC2.92□□□□□ -1.94
Col2a1P28481 Gm23385-201ENSMUST00000158592 295 ntBASIC2.92□□□□□ -1.94
Col2a1P28481 Spink14-202ENSMUST00000162265 542 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Col2a1P28481 Gm25598-201ENSMUST00000179031 107 ntBASIC2.92□□□□□ -1.94
Col2a1P28481 Gm27864-201ENSMUST00000183704 190 ntBASIC2.92□□□□□ -1.94
Col2a1P28481 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC2.92□□□□□ -1.94
Col2a1P28481 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
Col2a1P28481 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC2.92□□□□□ -1.94
Col2a1P28481 Olfr274-ps1-201ENSMUST00000216601 595 ntBASIC2.92□□□□□ -1.94
Col2a1P28481 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Col2a1P28481 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC2.92□□□□□ -1.94
Col2a1P28481 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
Col2a1P28481 AC117656.3-204ENSMUST00000225656 859 ntBASIC2.92□□□□□ -1.94
Col2a1P28481 AC133654.1-201ENSMUST00000228411 672 ntBASIC2.92□□□□□ -1.94
Col2a1P28481 Gm6369-201ENSMUST00000069626 412 ntBASIC2.92□□□□□ -1.94
Col2a1P28481 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Col2a1P28481 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Col2a1P28481 Olfr203-201ENSMUST00000089305 924 ntBASIC2.92□□□□□ -1.94
Col2a1P28481 Olfr501-ps1-201ENSMUST00000094105 946 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Col2a1P28481 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Col2a1P28481 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Col2a1P28481 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
Col2a1P28481 Gm14406-202ENSMUST00000108945 1348 ntAPPRIS P1 TSL 3 BASIC2.92□□□□□ -1.94
Col2a1P28481 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC2.92□□□□□ -1.94
Col2a1P28481 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
Col2a1P28481 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC2.92□□□□□ -1.94
Col2a1P28481 AC126673.3-201ENSMUST00000223414 3829 ntBASIC2.92□□□□□ -1.94
Col2a1P28481 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
Col2a1P28481 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
Col2a1P28481 Snord14c-201ENSMUST00000101927 86 ntBASIC2.91□□□□□ -1.94
Col2a1P28481 Gm22752-201ENSMUST00000102083 109 ntBASIC2.91□□□□□ -1.94
Col2a1P28481 Gm3055-201ENSMUST00000105316 720 ntTSL 5 BASIC2.91□□□□□ -1.94
Col2a1P28481 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC2.91□□□□□ -1.94
Col2a1P28481 Gm15019-201ENSMUST00000120148 434 ntBASIC2.91□□□□□ -1.94
Col2a1P28481 Gm13751-201ENSMUST00000120280 752 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms