Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Col8a2P25318 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Col8a2P25318 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Col8a2P25318 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Col8a2P25318 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Col8a2P25318 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Col8a2P25318 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Col8a2P25318 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Col8a2P25318 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Col8a2P25318 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Col8a2P25318 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Col8a2P25318 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Col8a2P25318 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Col8a2P25318 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Col8a2P25318 Gm1833-201ENSMUST00000191608 682 ntBASIC2.38□□□□□ -2.03
Col8a2P25318 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC2.38□□□□□ -2.03
Col8a2P25318 Gm45316-201ENSMUST00000210128 162 ntBASIC2.38□□□□□ -2.03
Col8a2P25318 Gm35262-201ENSMUST00000215133 267 ntBASIC2.38□□□□□ -2.03
Col8a2P25318 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Col8a2P25318 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Col8a2P25318 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Col8a2P25318 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Col8a2P25318 Gm22293-201ENSMUST00000083314 109 ntBASIC2.38□□□□□ -2.03
Col8a2P25318 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Col8a2P25318 Olfr895-201ENSMUST00000093864 951 ntBASIC2.38□□□□□ -2.03
Col8a2P25318 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Col8a2P25318 AC154481.2-201ENSMUST00000222526 3175 ntBASIC2.38□□□□□ -2.03
Col8a2P25318 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Col8a2P25318 Olfr197-202ENSMUST00000207772 1320 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Col8a2P25318 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
Col8a2P25318 Olfr849-202ENSMUST00000217273 6140 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Col8a2P25318 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Col8a2P25318 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
Col8a2P25318 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC2.37□□□□□ -2.03
Col8a2P25318 Gm26247-201ENSMUST00000116702 91 ntBASIC2.37□□□□□ -2.03
Col8a2P25318 Gm15159-201ENSMUST00000117062 764 ntBASIC2.37□□□□□ -2.03
Col8a2P25318 Gm13678-201ENSMUST00000118926 340 ntBASIC2.37□□□□□ -2.03
Col8a2P25318 Gm14599-201ENSMUST00000120469 474 ntBASIC2.37□□□□□ -2.03
Col8a2P25318 Gm16053-201ENSMUST00000120511 188 ntBASIC2.37□□□□□ -2.03
Col8a2P25318 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC2.37□□□□□ -2.03
Col8a2P25318 Gm24681-201ENSMUST00000158760 107 ntBASIC2.37□□□□□ -2.03
Col8a2P25318 Gm7346-201ENSMUST00000169661 476 ntBASIC2.37□□□□□ -2.03
Col8a2P25318 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC2.37□□□□□ -2.03
Col8a2P25318 Gm26365-201ENSMUST00000179177 94 ntBASIC2.37□□□□□ -2.03
Col8a2P25318 Gm26585-201ENSMUST00000180890 630 ntBASIC2.37□□□□□ -2.03
Col8a2P25318 Gm37002-201ENSMUST00000194560 373 ntBASIC2.37□□□□□ -2.03
Col8a2P25318 Gm37290-201ENSMUST00000195775 339 ntBASIC2.37□□□□□ -2.03
Col8a2P25318 Gm18660-201ENSMUST00000199542 629 ntBASIC2.37□□□□□ -2.03
Col8a2P25318 Gm31520-201ENSMUST00000203048 733 ntBASIC2.37□□□□□ -2.03
Col8a2P25318 Gm19244-201ENSMUST00000204340 253 ntBASIC2.37□□□□□ -2.03
Col8a2P25318 Gm43954-201ENSMUST00000204634 544 ntBASIC2.37□□□□□ -2.03
Col8a2P25318 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
Col8a2P25318 AC153522.1-201ENSMUST00000220047 1090 ntBASIC2.37□□□□□ -2.03
Col8a2P25318 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC2.37□□□□□ -2.03
Col8a2P25318 AC115750.1-201ENSMUST00000220441 567 ntBASIC2.37□□□□□ -2.03
Col8a2P25318 AC159188.1-201ENSMUST00000225198 526 ntBASIC2.37□□□□□ -2.03
Col8a2P25318 AC154329.2-201ENSMUST00000225257 383 ntBASIC2.37□□□□□ -2.03
Col8a2P25318 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Col8a2P25318 Gm22245-201ENSMUST00000082479 103 ntBASIC2.37□□□□□ -2.03
Col8a2P25318 Gm24928-201ENSMUST00000083399 107 ntBASIC2.37□□□□□ -2.03
Col8a2P25318 Gm25897-201ENSMUST00000083709 107 ntBASIC2.37□□□□□ -2.03
Col8a2P25318 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC2.37□□□□□ -2.03
Col8a2P25318 Gm37515-201ENSMUST00000193321 3817 ntBASIC2.37□□□□□ -2.03
Col8a2P25318 Gm14416-201ENSMUST00000118630 2308 ntBASIC2.36□□□□□ -2.03
Col8a2P25318 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Col8a2P25318 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Col8a2P25318 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Col8a2P25318 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
Col8a2P25318 Gm14880-201ENSMUST00000117581 292 ntBASIC2.36□□□□□ -2.03
Col8a2P25318 Gm14971-201ENSMUST00000117980 663 ntBASIC2.36□□□□□ -2.03
Col8a2P25318 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC2.36□□□□□ -2.03
Col8a2P25318 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC2.36□□□□□ -2.03
Col8a2P25318 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Col8a2P25318 Gm24443-201ENSMUST00000157242 132 ntBASIC2.36□□□□□ -2.03
Col8a2P25318 Gm26349-201ENSMUST00000157530 130 ntBASIC2.36□□□□□ -2.03
Col8a2P25318 Gm25883-201ENSMUST00000157781 271 ntBASIC2.36□□□□□ -2.03
Col8a2P25318 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
Col8a2P25318 Gm3370-201ENSMUST00000171785 500 ntBASIC2.36□□□□□ -2.03
Col8a2P25318 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Col8a2P25318 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Col8a2P25318 Gm7909-201ENSMUST00000182688 614 ntBASIC2.36□□□□□ -2.03
Col8a2P25318 Mir7081-201ENSMUST00000184490 75 ntBASIC2.36□□□□□ -2.03
Col8a2P25318 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Col8a2P25318 Gm44076-201ENSMUST00000203072 520 ntBASIC2.36□□□□□ -2.03
Col8a2P25318 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC2.36□□□□□ -2.03
Col8a2P25318 Gm18410-201ENSMUST00000207199 577 ntBASIC2.36□□□□□ -2.03
Col8a2P25318 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC2.36□□□□□ -2.03
Col8a2P25318 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC2.36□□□□□ -2.03
Col8a2P25318 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
Col8a2P25318 Gm46436-201ENSMUST00000221851 1294 ntBASIC2.36□□□□□ -2.03
Col8a2P25318 AC134254.5-201ENSMUST00000223436 400 ntBASIC2.36□□□□□ -2.03
Col8a2P25318 Zmym2-202ENSMUST00000223669 1281 ntBASIC2.36□□□□□ -2.03
Col8a2P25318 CT573085.1-201ENSMUST00000224279 1197 ntBASIC2.36□□□□□ -2.03
Col8a2P25318 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Col8a2P25318 Gm22970-201ENSMUST00000083304 186 ntBASIC2.36□□□□□ -2.03
Col8a2P25318 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Col8a2P25318 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Col8a2P25318 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Col8a2P25318 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Col8a2P25318 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms