Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC2.82□□□□□ -1.96
P20040 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
P20040 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
P20040 Gm23415-201ENSMUST00000175519 83 ntBASIC2.82□□□□□ -1.96
P20040 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC2.82□□□□□ -1.96
P20040 Gm42465-201ENSMUST00000197036 492 ntBASIC2.82□□□□□ -1.96
P20040 Gm43239-201ENSMUST00000200131 201 ntBASIC2.82□□□□□ -1.96
P20040 Igkv13-82-201ENSMUST00000200308 346 ntBASIC2.82□□□□□ -1.96
P20040 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC2.82□□□□□ -1.96
P20040 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC2.82□□□□□ -1.96
P20040 Gm29920-201ENSMUST00000206876 754 ntBASIC2.82□□□□□ -1.96
P20040 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC2.82□□□□□ -1.96
P20040 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC2.82□□□□□ -1.96
P20040 Gm18015-201ENSMUST00000214879 316 ntBASIC2.82□□□□□ -1.96
P20040 AC164629.1-201ENSMUST00000220250 1113 ntBASIC2.82□□□□□ -1.96
P20040 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC2.82□□□□□ -1.96
P20040 AC154224.1-201ENSMUST00000224367 403 ntBASIC2.82□□□□□ -1.96
P20040 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
P20040 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
P20040 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
P20040 Olfr1193-201ENSMUST00000081697 957 ntBASIC2.82□□□□□ -1.96
P20040 Mir421-201ENSMUST00000083575 76 ntBASIC2.82□□□□□ -1.96
P20040 Mir350-201ENSMUST00000083639 99 ntBASIC2.82□□□□□ -1.96
P20040 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
P20040 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
P20040 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
P20040 Gm7648-201ENSMUST00000173036 1658 ntBASIC2.82□□□□□ -1.96
P20040 Gm37645-201ENSMUST00000194285 3556 ntBASIC2.81□□□□□ -1.96
P20040 Mir706-201ENSMUST00000102262 84 ntBASIC2.81□□□□□ -1.96
P20040 Gm13603-201ENSMUST00000119404 83 ntBASIC2.81□□□□□ -1.96
P20040 Gm13574-201ENSMUST00000120482 394 ntBASIC2.81□□□□□ -1.96
P20040 Gm14989-201ENSMUST00000120497 207 ntBASIC2.81□□□□□ -1.96
P20040 Gm7308-201ENSMUST00000121087 447 ntBASIC2.81□□□□□ -1.96
P20040 Gm14578-201ENSMUST00000122166 391 ntBASIC2.81□□□□□ -1.96
P20040 Gm22956-201ENSMUST00000122520 80 ntBASIC2.81□□□□□ -1.96
P20040 Gm23791-201ENSMUST00000122553 293 ntBASIC2.81□□□□□ -1.96
P20040 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC2.81□□□□□ -1.96
P20040 Gm23865-201ENSMUST00000157723 97 ntBASIC2.81□□□□□ -1.96
P20040 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
P20040 Gm13147-202ENSMUST00000177526 1173 ntBASIC2.81□□□□□ -1.96
P20040 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC2.81□□□□□ -1.96
P20040 Gm24968-201ENSMUST00000179817 107 ntBASIC2.81□□□□□ -1.96
P20040 Gm28146-201ENSMUST00000185517 701 ntBASIC2.81□□□□□ -1.96
P20040 Gm6510-201ENSMUST00000195916 574 ntBASIC2.81□□□□□ -1.96
P20040 Gm43541-201ENSMUST00000197208 581 ntBASIC2.81□□□□□ -1.96
P20040 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC2.81□□□□□ -1.96
P20040 Gm5551-201ENSMUST00000199720 690 ntBASIC2.81□□□□□ -1.96
P20040 Gm35931-201ENSMUST00000203931 448 ntBASIC2.81□□□□□ -1.96
P20040 Gm44720-201ENSMUST00000206076 260 ntBASIC2.81□□□□□ -1.96
P20040 Olfr512-202ENSMUST00000209620 1056 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
P20040 Gm19137-201ENSMUST00000213790 1164 ntBASIC2.81□□□□□ -1.96
P20040 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC2.81□□□□□ -1.96
P20040 Olfr1463-201ENSMUST00000064102 933 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
P20040 Olfr512-201ENSMUST00000074730 1056 ntBASIC2.81□□□□□ -1.96
P20040 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
P20040 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC2.81□□□□□ -1.96
P20040 Gm42852-201ENSMUST00000202649 1379 ntBASIC2.81□□□□□ -1.96
P20040 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC2.81□□□□□ -1.96
P20040 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
P20040 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
P20040 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
P20040 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
P20040 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
P20040 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
P20040 Gm37999-201ENSMUST00000195178 1809 ntBASIC2.8□□□□□ -1.96
P20040 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
P20040 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
P20040 Gm20679-201ENSMUST00000177285 1402 ntBASIC2.8□□□□□ -1.96
P20040 Gm22115-201ENSMUST00000103976 133 ntBASIC2.8□□□□□ -1.96
P20040 Gm23923-201ENSMUST00000104108 133 ntBASIC2.8□□□□□ -1.96
P20040 Gm14971-201ENSMUST00000117980 663 ntBASIC2.8□□□□□ -1.96
P20040 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC2.8□□□□□ -1.96
P20040 Gm13717-201ENSMUST00000119868 365 ntBASIC2.8□□□□□ -1.96
P20040 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
P20040 Gm8289-201ENSMUST00000144814 1182 ntBASIC2.8□□□□□ -1.96
P20040 Gm22186-201ENSMUST00000157822 122 ntBASIC2.8□□□□□ -1.96
P20040 Gm20534-201ENSMUST00000172957 172 ntBASIC2.8□□□□□ -1.96
P20040 Gm20648-201ENSMUST00000175815 328 ntBASIC2.8□□□□□ -1.96
P20040 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
P20040 Gm27374-201ENSMUST00000183660 81 ntBASIC2.8□□□□□ -1.96
P20040 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC2.8□□□□□ -1.96
P20040 Gm28314-201ENSMUST00000191276 345 ntBASIC2.8□□□□□ -1.96
P20040 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
P20040 Gm37828-201ENSMUST00000192496 432 ntBASIC2.8□□□□□ -1.96
P20040 Gm37979-201ENSMUST00000193065 712 ntBASIC2.8□□□□□ -1.96
P20040 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
P20040 Gm37523-201ENSMUST00000194901 412 ntBASIC2.8□□□□□ -1.96
P20040 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC2.8□□□□□ -1.96
P20040 Gm7751-201ENSMUST00000212868 709 ntBASIC2.8□□□□□ -1.96
P20040 AC161054.1-201ENSMUST00000214319 184 ntBASIC2.8□□□□□ -1.96
P20040 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC2.8□□□□□ -1.96
P20040 Gm18892-201ENSMUST00000217628 881 ntBASIC2.8□□□□□ -1.96
P20040 AC168059.2-201ENSMUST00000224473 333 ntBASIC2.8□□□□□ -1.96
P20040 AC101945.3-201ENSMUST00000226568 153 ntBASIC2.8□□□□□ -1.96
P20040 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC2.8□□□□□ -1.96
P20040 Gm25792-201ENSMUST00000083289 100 ntBASIC2.8□□□□□ -1.96
P20040 Olfr995-201ENSMUST00000099924 1113 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
P20040 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
P20040 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC2.79□□□□□ -1.96
P20040 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC2.79□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 10.3 ms