Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 AC145736.1-201ENSMUST00000214661 479 ntBASIC2.55□□□□□ -2
Sdc1P18828 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Sdc1P18828 AC157570.3-201ENSMUST00000219281 205 ntBASIC2.55□□□□□ -2
Sdc1P18828 AC153870.1-201ENSMUST00000219599 560 ntBASIC2.55□□□□□ -2
Sdc1P18828 AC132315.1-201ENSMUST00000221771 390 ntBASIC2.55□□□□□ -2
Sdc1P18828 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC2.55□□□□□ -2
Sdc1P18828 AC124524.1-201ENSMUST00000225833 181 ntBASIC2.55□□□□□ -2
Sdc1P18828 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC2.55□□□□□ -2
Sdc1P18828 AC115735.1-201ENSMUST00000226633 350 ntBASIC2.55□□□□□ -2
Sdc1P18828 Gm23297-201ENSMUST00000083184 127 ntBASIC2.55□□□□□ -2
Sdc1P18828 Mir21a-201ENSMUST00000083521 92 ntBASIC2.55□□□□□ -2
Sdc1P18828 Mir103-2-201ENSMUST00000083629 86 ntBASIC2.55□□□□□ -2
Sdc1P18828 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
Sdc1P18828 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Sdc1P18828 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Sdc1P18828 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC2.54□□□□□ -2
Sdc1P18828 Gm13751-201ENSMUST00000120280 752 ntBASIC2.54□□□□□ -2
Sdc1P18828 Gm11819-201ENSMUST00000122192 372 ntBASIC2.54□□□□□ -2
Sdc1P18828 Gm13424-201ENSMUST00000122301 354 ntBASIC2.54□□□□□ -2
Sdc1P18828 Prl2c5-204ENSMUST00000151144 623 ntTSL 2 BASIC2.54□□□□□ -2
Sdc1P18828 Gm23470-201ENSMUST00000157129 120 ntBASIC2.54□□□□□ -2
Sdc1P18828 Gm16290-201ENSMUST00000161175 474 ntBASIC2.54□□□□□ -2
Sdc1P18828 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC2.54□□□□□ -2
Sdc1P18828 Gm23365-201ENSMUST00000175019 125 ntBASIC2.54□□□□□ -2
Sdc1P18828 Gm44453-201ENSMUST00000175161 126 ntBASIC2.54□□□□□ -2
Sdc1P18828 Gm25195-201ENSMUST00000177656 126 ntBASIC2.54□□□□□ -2
Sdc1P18828 Gm27861-201ENSMUST00000183920 214 ntBASIC2.54□□□□□ -2
Sdc1P18828 Mir8103-201ENSMUST00000183945 107 ntBASIC2.54□□□□□ -2
Sdc1P18828 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Sdc1P18828 Gm7858-201ENSMUST00000190177 622 ntBASIC2.54□□□□□ -2
Sdc1P18828 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Sdc1P18828 Gm20203-201ENSMUST00000192352 332 ntBASIC2.54□□□□□ -2
Sdc1P18828 Gm18982-201ENSMUST00000198118 529 ntBASIC2.54□□□□□ -2
Sdc1P18828 Gm43899-201ENSMUST00000203675 246 ntBASIC2.54□□□□□ -2
Sdc1P18828 Gm29920-201ENSMUST00000206876 754 ntBASIC2.54□□□□□ -2
Sdc1P18828 Gm45912-201ENSMUST00000210646 543 ntBASIC2.54□□□□□ -2
Sdc1P18828 AC073947.3-201ENSMUST00000215576 766 ntBASIC2.54□□□□□ -2
Sdc1P18828 Olfr274-ps1-201ENSMUST00000216601 595 ntBASIC2.54□□□□□ -2
Sdc1P18828 AC166113.1-201ENSMUST00000225258 475 ntBASIC2.54□□□□□ -2
Sdc1P18828 AC108416.2-201ENSMUST00000226792 367 ntBASIC2.54□□□□□ -2
Sdc1P18828 AC172751.1-201ENSMUST00000226887 440 ntBASIC2.54□□□□□ -2
Sdc1P18828 AC139845.2-201ENSMUST00000227504 436 ntBASIC2.54□□□□□ -2
Sdc1P18828 AC154532.2-201ENSMUST00000228947 598 ntBASIC2.54□□□□□ -2
Sdc1P18828 Gm26128-201ENSMUST00000083170 110 ntBASIC2.54□□□□□ -2
Sdc1P18828 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC2.54□□□□□ -2
Sdc1P18828 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC2.53□□□□□ -2
Sdc1P18828 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
Sdc1P18828 Gm20679-201ENSMUST00000177285 1402 ntBASIC2.53□□□□□ -2
Sdc1P18828 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Sdc1P18828 AC152159.1-201ENSMUST00000226719 2769 ntBASIC2.53□□□□□ -2
Sdc1P18828 Snord14c-201ENSMUST00000101927 86 ntBASIC2.53□□□□□ -2
Sdc1P18828 Gm23481-201ENSMUST00000104173 131 ntBASIC2.53□□□□□ -2
Sdc1P18828 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC2.53□□□□□ -2
Sdc1P18828 Gm11490-201ENSMUST00000118128 272 ntBASIC2.53□□□□□ -2
Sdc1P18828 Gm13239-201ENSMUST00000119920 637 ntBASIC2.53□□□□□ -2
Sdc1P18828 Gm14915-201ENSMUST00000120747 204 ntBASIC2.53□□□□□ -2
Sdc1P18828 Gm11456-201ENSMUST00000121070 256 ntBASIC2.53□□□□□ -2
Sdc1P18828 Gm26477-201ENSMUST00000122617 323 ntBASIC2.53□□□□□ -2
Sdc1P18828 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC2.53□□□□□ -2
Sdc1P18828 Gm22310-201ENSMUST00000157509 116 ntBASIC2.53□□□□□ -2
Sdc1P18828 Gm24961-201ENSMUST00000157918 184 ntBASIC2.53□□□□□ -2
Sdc1P18828 Gm24552-201ENSMUST00000158646 103 ntBASIC2.53□□□□□ -2
Sdc1P18828 Gm23023-201ENSMUST00000158767 109 ntBASIC2.53□□□□□ -2
Sdc1P18828 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC2.53□□□□□ -2
Sdc1P18828 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC2.53□□□□□ -2
Sdc1P18828 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC2.53□□□□□ -2
Sdc1P18828 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC2.53□□□□□ -2
Sdc1P18828 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC2.53□□□□□ -2
Sdc1P18828 Gm26585-201ENSMUST00000180890 630 ntBASIC2.53□□□□□ -2
Sdc1P18828 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC2.53□□□□□ -2
Sdc1P18828 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC2.53□□□□□ -2
Sdc1P18828 Mir6413-201ENSMUST00000184049 108 ntBASIC2.53□□□□□ -2
Sdc1P18828 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC2.53□□□□□ -2
Sdc1P18828 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC2.53□□□□□ -2
Sdc1P18828 Scgb2b31-ps-201ENSMUST00000188734 328 ntBASIC2.53□□□□□ -2
Sdc1P18828 Gm30280-201ENSMUST00000192214 262 ntBASIC2.53□□□□□ -2
Sdc1P18828 Ighv3-7-201ENSMUST00000193370 348 ntBASIC2.53□□□□□ -2
Sdc1P18828 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC2.53□□□□□ -2
Sdc1P18828 Gm44476-201ENSMUST00000196225 91 ntBASIC2.53□□□□□ -2
Sdc1P18828 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC2.53□□□□□ -2
Sdc1P18828 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC2.53□□□□□ -2
Sdc1P18828 Gm44657-201ENSMUST00000208568 450 ntBASIC2.53□□□□□ -2
Sdc1P18828 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC2.53□□□□□ -2
Sdc1P18828 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC2.53□□□□□ -2
Sdc1P18828 AC153522.1-201ENSMUST00000220047 1090 ntBASIC2.53□□□□□ -2
Sdc1P18828 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC2.53□□□□□ -2
Sdc1P18828 CT030242.2-201ENSMUST00000221588 148 ntBASIC2.53□□□□□ -2
Sdc1P18828 Gm9765-201ENSMUST00000043170 321 ntBASIC2.53□□□□□ -2
Sdc1P18828 Snord22-201ENSMUST00000083153 126 ntBASIC2.53□□□□□ -2
Sdc1P18828 Gm25480-201ENSMUST00000083217 133 ntBASIC2.53□□□□□ -2
Sdc1P18828 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
Sdc1P18828 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC2.53□□□□□ -2
Sdc1P18828 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
Sdc1P18828 Gm45104-201ENSMUST00000208748 4350 ntBASIC2.53□□□□□ -2
Sdc1P18828 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
Sdc1P18828 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2.01
Sdc1P18828 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC2.52□□□□□ -2.01
Sdc1P18828 AC161254.1-201ENSMUST00000220310 3842 ntBASIC2.52□□□□□ -2.01
Sdc1P18828 Gm37999-201ENSMUST00000195178 1809 ntBASIC2.52□□□□□ -2.01
Sdc1P18828 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms