Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Col5a1O88207 Gm26437-201ENSMUST00000082595 105 ntBASIC2.36□□□□□ -2.03
Col5a1O88207 Gm25810-201ENSMUST00000082752 108 ntBASIC2.36□□□□□ -2.03
Col5a1O88207 Olfr1049-202ENSMUST00000216185 1471 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Col5a1O88207 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
Col5a1O88207 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Col5a1O88207 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Col5a1O88207 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC2.35□□□□□ -2.03
Col5a1O88207 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.35□□□□□ -2.03
Col5a1O88207 Gm24379-201ENSMUST00000122695 86 ntBASIC2.35□□□□□ -2.03
Col5a1O88207 Gm15555-201ENSMUST00000128832 713 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Col5a1O88207 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.35□□□□□ -2.03
Col5a1O88207 Gm14368-201ENSMUST00000145305 415 ntBASIC2.35□□□□□ -2.03
Col5a1O88207 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC2.35□□□□□ -2.03
Col5a1O88207 Gm22084-201ENSMUST00000157585 105 ntBASIC2.35□□□□□ -2.03
Col5a1O88207 Gm26354-201ENSMUST00000158221 129 ntBASIC2.35□□□□□ -2.03
Col5a1O88207 Gm3025-201ENSMUST00000163454 489 ntBASIC2.35□□□□□ -2.03
Col5a1O88207 Gm2878-201ENSMUST00000170173 486 ntBASIC2.35□□□□□ -2.03
Col5a1O88207 Gm19200-201ENSMUST00000182579 1001 ntBASIC2.35□□□□□ -2.03
Col5a1O88207 1700057G04Rik-206ENSMUST00000185580 842 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Col5a1O88207 1700101O22Rik-201ENSMUST00000187396 339 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Col5a1O88207 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Col5a1O88207 Ighv1-1-201ENSMUST00000194912 291 ntBASIC2.35□□□□□ -2.03
Col5a1O88207 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC2.35□□□□□ -2.03
Col5a1O88207 Gm5655-201ENSMUST00000221078 901 ntBASIC2.35□□□□□ -2.03
Col5a1O88207 AC134596.2-201ENSMUST00000222158 171 ntBASIC2.35□□□□□ -2.03
Col5a1O88207 AC154600.1-201ENSMUST00000226480 714 ntBASIC2.35□□□□□ -2.03
Col5a1O88207 Olfr952-201ENSMUST00000073895 1056 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Col5a1O88207 Gm25799-201ENSMUST00000082643 107 ntBASIC2.35□□□□□ -2.03
Col5a1O88207 Olfr775-201ENSMUST00000097163 939 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Col5a1O88207 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Col5a1O88207 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
Col5a1O88207 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Col5a1O88207 Gm24670-201ENSMUST00000104154 132 ntBASIC2.35□□□□□ -2.03
Col5a1O88207 Gm25317-201ENSMUST00000116824 129 ntBASIC2.35□□□□□ -2.03
Col5a1O88207 Gm13728-201ENSMUST00000117471 400 ntBASIC2.35□□□□□ -2.03
Col5a1O88207 Gm22257-201ENSMUST00000158687 301 ntBASIC2.35□□□□□ -2.03
Col5a1O88207 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC2.35□□□□□ -2.03
Col5a1O88207 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC2.35□□□□□ -2.03
Col5a1O88207 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC2.35□□□□□ -2.03
Col5a1O88207 Gm9892-201ENSMUST00000182415 992 ntBASIC2.35□□□□□ -2.03
Col5a1O88207 Mir6363-201ENSMUST00000184880 114 ntBASIC2.35□□□□□ -2.03
Col5a1O88207 Olfr1055-202ENSMUST00000188023 939 ntBASIC2.35□□□□□ -2.03
Col5a1O88207 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC2.35□□□□□ -2.03
Col5a1O88207 Gm28639-201ENSMUST00000191519 481 ntBASIC2.35□□□□□ -2.03
Col5a1O88207 Gm37720-201ENSMUST00000195497 1241 ntBASIC2.35□□□□□ -2.03
Col5a1O88207 Gm44903-201ENSMUST00000206840 130 ntBASIC2.35□□□□□ -2.03
Col5a1O88207 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC2.35□□□□□ -2.03
Col5a1O88207 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC2.35□□□□□ -2.03
Col5a1O88207 AC124400.1-201ENSMUST00000225779 193 ntBASIC2.35□□□□□ -2.03
Col5a1O88207 Olfr971-201ENSMUST00000075467 924 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Col5a1O88207 Olfr1318-205ENSMUST00000217533 3747 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Col5a1O88207 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.34□□□□□ -2.03
Col5a1O88207 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC2.34□□□□□ -2.03
Col5a1O88207 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
Col5a1O88207 1700017N19Rik-210ENSMUST00000218464 1597 ntTSL 5 BASIC2.34□□□□□ -2.03
Col5a1O88207 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC2.34□□□□□ -2.03
Col5a1O88207 Gm13743-201ENSMUST00000121486 724 ntBASIC2.34□□□□□ -2.03
Col5a1O88207 Gm23980-201ENSMUST00000157135 158 ntBASIC2.34□□□□□ -2.03
Col5a1O88207 Gm23587-201ENSMUST00000157658 84 ntBASIC2.34□□□□□ -2.03
Col5a1O88207 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC2.34□□□□□ -2.03
Col5a1O88207 Vmn1r-ps48-201ENSMUST00000176352 886 ntBASIC2.34□□□□□ -2.03
Col5a1O88207 Gm36638-201ENSMUST00000193295 400 ntBASIC2.34□□□□□ -2.03
Col5a1O88207 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC2.34□□□□□ -2.03
Col5a1O88207 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC2.34□□□□□ -2.03
Col5a1O88207 Gm30674-201ENSMUST00000214523 392 ntBASIC2.34□□□□□ -2.03
Col5a1O88207 AC159476.2-201ENSMUST00000216221 418 ntBASIC2.34□□□□□ -2.03
Col5a1O88207 AC158622.1-201ENSMUST00000217107 230 ntBASIC2.34□□□□□ -2.03
Col5a1O88207 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC2.34□□□□□ -2.03
Col5a1O88207 Vmn1r2-202ENSMUST00000226198 1126 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Col5a1O88207 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Col5a1O88207 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
Col5a1O88207 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC2.33□□□□□ -2.04
Col5a1O88207 Mir542-201ENSMUST00000102186 85 ntBASIC2.33□□□□□ -2.04
Col5a1O88207 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Col5a1O88207 Gm11285-201ENSMUST00000118443 322 ntBASIC2.33□□□□□ -2.04
Col5a1O88207 Sult1b1-203ENSMUST00000120150 1213 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Col5a1O88207 Gm13923-201ENSMUST00000153283 288 ntTSL 3 BASIC2.33□□□□□ -2.04
Col5a1O88207 Gm26171-201ENSMUST00000158422 131 ntBASIC2.33□□□□□ -2.04
Col5a1O88207 Gm15974-201ENSMUST00000159103 531 ntBASIC2.33□□□□□ -2.04
Col5a1O88207 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Col5a1O88207 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC2.33□□□□□ -2.04
Col5a1O88207 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
Col5a1O88207 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
Col5a1O88207 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC2.33□□□□□ -2.04
Col5a1O88207 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC2.33□□□□□ -2.04
Col5a1O88207 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC2.33□□□□□ -2.04
Col5a1O88207 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
Col5a1O88207 Gm27163-201ENSMUST00000184767 409 ntBASIC2.33□□□□□ -2.04
Col5a1O88207 Gm37751-201ENSMUST00000192440 1198 ntBASIC2.33□□□□□ -2.04
Col5a1O88207 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC2.33□□□□□ -2.04
Col5a1O88207 Gm37002-201ENSMUST00000194560 373 ntBASIC2.33□□□□□ -2.04
Col5a1O88207 Gm43669-201ENSMUST00000198229 436 ntBASIC2.33□□□□□ -2.04
Col5a1O88207 Gm44431-201ENSMUST00000203500 413 ntBASIC2.33□□□□□ -2.04
Col5a1O88207 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC2.33□□□□□ -2.04
Col5a1O88207 AC153801.1-201ENSMUST00000217904 947 ntBASIC2.33□□□□□ -2.04
Col5a1O88207 AC164629.1-201ENSMUST00000220250 1113 ntBASIC2.33□□□□□ -2.04
Col5a1O88207 Platr25-208ENSMUST00000222602 939 ntBASIC2.33□□□□□ -2.04
Col5a1O88207 CT030135.1-201ENSMUST00000223760 570 ntBASIC2.33□□□□□ -2.04
Col5a1O88207 AC124729.1-202ENSMUST00000225587 938 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms