Protein–RNA interactions for Protein: O55187

Cbx4, E3 SUMO-protein ligase CBX4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx4O55187 Gm26128-201ENSMUST00000083170 110 ntBASIC3.71□□□□□ -1.82
Cbx4O55187 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Cbx4O55187 Gm29730-201ENSMUST00000192986 1396 ntBASIC3.71□□□□□ -1.82
Cbx4O55187 Gm37655-201ENSMUST00000193968 4123 ntBASIC3.71□□□□□ -1.82
Cbx4O55187 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Cbx4O55187 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Cbx4O55187 Gm44078-201ENSMUST00000204652 2646 ntBASIC3.71□□□□□ -1.82
Cbx4O55187 Gm37887-201ENSMUST00000192752 2716 ntBASIC3.71□□□□□ -1.82
Cbx4O55187 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Cbx4O55187 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Cbx4O55187 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Cbx4O55187 AC125532.1-201ENSMUST00000216210 2334 ntBASIC3.7□□□□□ -1.82
Cbx4O55187 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Cbx4O55187 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Cbx4O55187 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Cbx4O55187 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Cbx4O55187 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Cbx4O55187 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Cbx4O55187 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Cbx4O55187 Gm12427-201ENSMUST00000117719 302 ntBASIC3.7□□□□□ -1.82
Cbx4O55187 Gm11923-201ENSMUST00000118135 508 ntBASIC3.7□□□□□ -1.82
Cbx4O55187 Gm11625-201ENSMUST00000119535 296 ntBASIC3.7□□□□□ -1.82
Cbx4O55187 Gm25784-201ENSMUST00000122524 81 ntBASIC3.7□□□□□ -1.82
Cbx4O55187 Gm22988-201ENSMUST00000122759 144 ntBASIC3.7□□□□□ -1.82
Cbx4O55187 Gm25294-201ENSMUST00000122791 104 ntBASIC3.7□□□□□ -1.82
Cbx4O55187 Gm25292-201ENSMUST00000122797 322 ntBASIC3.7□□□□□ -1.82
Cbx4O55187 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC3.7□□□□□ -1.82
Cbx4O55187 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC3.7□□□□□ -1.82
Cbx4O55187 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Cbx4O55187 Gm9613-201ENSMUST00000171662 196 ntBASIC3.7□□□□□ -1.82
Cbx4O55187 Gm26460-201ENSMUST00000175061 126 ntBASIC3.7□□□□□ -1.82
Cbx4O55187 Mir3066-201ENSMUST00000175296 83 ntBASIC3.7□□□□□ -1.82
Cbx4O55187 Gm22716-201ENSMUST00000177596 107 ntBASIC3.7□□□□□ -1.82
Cbx4O55187 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Cbx4O55187 Gm8392-201ENSMUST00000185647 835 ntBASIC3.7□□□□□ -1.82
Cbx4O55187 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC3.7□□□□□ -1.82
Cbx4O55187 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC3.7□□□□□ -1.82
Cbx4O55187 Gm43227-201ENSMUST00000202239 677 ntBASIC3.7□□□□□ -1.82
Cbx4O55187 Gm43155-201ENSMUST00000202661 494 ntBASIC3.7□□□□□ -1.82
Cbx4O55187 Gm45173-201ENSMUST00000206819 305 ntBASIC3.7□□□□□ -1.82
Cbx4O55187 Gm45590-201ENSMUST00000209715 262 ntBASIC3.7□□□□□ -1.82
Cbx4O55187 AC157017.2-201ENSMUST00000218354 777 ntBASIC3.7□□□□□ -1.82
Cbx4O55187 AC159621.1-201ENSMUST00000223249 163 ntBASIC3.7□□□□□ -1.82
Cbx4O55187 Gm9762-201ENSMUST00000036976 444 ntBASIC3.7□□□□□ -1.82
Cbx4O55187 Gm24626-201ENSMUST00000082621 161 ntBASIC3.7□□□□□ -1.82
Cbx4O55187 Gm7905-201ENSMUST00000119933 1386 ntBASIC3.7□□□□□ -1.82
Cbx4O55187 Gm6207-201ENSMUST00000120075 1386 ntBASIC3.7□□□□□ -1.82
Cbx4O55187 Gm6228-201ENSMUST00000178856 1386 ntBASIC3.7□□□□□ -1.82
Cbx4O55187 Gm6221-201ENSMUST00000180064 1386 ntBASIC3.7□□□□□ -1.82
Cbx4O55187 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Cbx4O55187 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC3.7□□□□□ -1.82
Cbx4O55187 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Cbx4O55187 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Cbx4O55187 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
Cbx4O55187 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Cbx4O55187 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
Cbx4O55187 Gm18609-201ENSMUST00000203370 3601 ntBASIC3.69□□□□□ -1.82
Cbx4O55187 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Cbx4O55187 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Cbx4O55187 Mir19b-1-201ENSMUST00000102301 87 ntBASIC3.69□□□□□ -1.82
Cbx4O55187 Gm23697-201ENSMUST00000103897 110 ntBASIC3.69□□□□□ -1.82
Cbx4O55187 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC3.69□□□□□ -1.82
Cbx4O55187 Gm12268-201ENSMUST00000118398 442 ntBASIC3.69□□□□□ -1.82
Cbx4O55187 Gm14359-201ENSMUST00000118883 424 ntBASIC3.69□□□□□ -1.82
Cbx4O55187 Gm9078-201ENSMUST00000119126 617 ntBASIC3.69□□□□□ -1.82
Cbx4O55187 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC3.69□□□□□ -1.82
Cbx4O55187 Gm13239-201ENSMUST00000119920 637 ntBASIC3.69□□□□□ -1.82
Cbx4O55187 Gm14240-201ENSMUST00000120353 546 ntBASIC3.69□□□□□ -1.82
Cbx4O55187 Gm11982-201ENSMUST00000121480 314 ntBASIC3.69□□□□□ -1.82
Cbx4O55187 Gm14129-201ENSMUST00000122436 291 ntBASIC3.69□□□□□ -1.82
Cbx4O55187 Gm9498-201ENSMUST00000140849 291 ntBASIC3.69□□□□□ -1.82
Cbx4O55187 Gm12226-201ENSMUST00000144172 876 ntBASIC3.69□□□□□ -1.82
Cbx4O55187 Gm26028-201ENSMUST00000158660 294 ntBASIC3.69□□□□□ -1.82
Cbx4O55187 Gm23473-201ENSMUST00000158883 116 ntBASIC3.69□□□□□ -1.82
Cbx4O55187 Gm22120-201ENSMUST00000175590 70 ntBASIC3.69□□□□□ -1.82
Cbx4O55187 Mir5710-201ENSMUST00000176884 69 ntBASIC3.69□□□□□ -1.82
Cbx4O55187 Gm7094-201ENSMUST00000178379 366 ntBASIC3.69□□□□□ -1.82
Cbx4O55187 Mir6907-201ENSMUST00000183764 71 ntBASIC3.69□□□□□ -1.82
Cbx4O55187 Mir6382-201ENSMUST00000184055 110 ntBASIC3.69□□□□□ -1.82
Cbx4O55187 Gm28151-201ENSMUST00000189404 951 ntBASIC3.69□□□□□ -1.82
Cbx4O55187 Gm28500-201ENSMUST00000190286 151 ntBASIC3.69□□□□□ -1.82
Cbx4O55187 Gm38076-201ENSMUST00000193889 450 ntBASIC3.69□□□□□ -1.82
Cbx4O55187 Gm38053-201ENSMUST00000193938 160 ntBASIC3.69□□□□□ -1.82
Cbx4O55187 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC3.69□□□□□ -1.82
Cbx4O55187 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC3.69□□□□□ -1.82
Cbx4O55187 AC152415.1-201ENSMUST00000213320 440 ntBASIC3.69□□□□□ -1.82
Cbx4O55187 Gm9068-201ENSMUST00000217393 455 ntBASIC3.69□□□□□ -1.82
Cbx4O55187 AC131720.2-201ENSMUST00000220420 431 ntBASIC3.69□□□□□ -1.82
Cbx4O55187 Gm46312-201ENSMUST00000220961 420 ntBASIC3.69□□□□□ -1.82
Cbx4O55187 Gm19441-201ENSMUST00000221545 330 ntBASIC3.69□□□□□ -1.82
Cbx4O55187 Gm18441-201ENSMUST00000223539 617 ntBASIC3.69□□□□□ -1.82
Cbx4O55187 AC192333.2-201ENSMUST00000224771 196 ntBASIC3.69□□□□□ -1.82
Cbx4O55187 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Cbx4O55187 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Cbx4O55187 Snord21-201ENSMUST00000082519 94 ntBASIC3.69□□□□□ -1.82
Cbx4O55187 Gm23614-201ENSMUST00000082598 107 ntBASIC3.69□□□□□ -1.82
Cbx4O55187 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC3.69□□□□□ -1.82
Cbx4O55187 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Cbx4O55187 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
Cbx4O55187 Gm38073-201ENSMUST00000195141 3665 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms