Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Gm13432-201ENSMUST00000118861 241 ntBASIC2.11□□□□□ -2.07
Cacna1bO55017 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC2.11□□□□□ -2.07
Cacna1bO55017 Gm28650-201ENSMUST00000188413 411 ntBASIC2.11□□□□□ -2.07
Cacna1bO55017 Gm37455-201ENSMUST00000191993 529 ntBASIC2.11□□□□□ -2.07
Cacna1bO55017 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC2.11□□□□□ -2.07
Cacna1bO55017 A530053G22Rik-203ENSMUST00000204370 612 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
Cacna1bO55017 AC154635.1-201ENSMUST00000221433 400 ntTSL 3 BASIC2.11□□□□□ -2.07
Cacna1bO55017 AC124356.2-201ENSMUST00000221874 336 ntBASIC2.11□□□□□ -2.07
Cacna1bO55017 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Cacna1bO55017 Gm23623-201ENSMUST00000082461 107 ntBASIC2.11□□□□□ -2.07
Cacna1bO55017 Gm23347-201ENSMUST00000083823 82 ntBASIC2.11□□□□□ -2.07
Cacna1bO55017 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Cacna1bO55017 Olfr1308-202ENSMUST00000207560 2093 ntAPPRIS P1 TSL 3 BASIC2.11□□□□□ -2.07
Cacna1bO55017 Gm42484-201ENSMUST00000196075 2104 ntBASIC2.11□□□□□ -2.07
Cacna1bO55017 Olfr1158-201ENSMUST00000102622 942 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Cacna1bO55017 Gm22673-201ENSMUST00000104415 131 ntBASIC2.11□□□□□ -2.07
Cacna1bO55017 Gm15714-201ENSMUST00000117168 250 ntBASIC2.11□□□□□ -2.07
Cacna1bO55017 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC2.11□□□□□ -2.07
Cacna1bO55017 Mir3968-201ENSMUST00000175355 100 ntBASIC2.11□□□□□ -2.07
Cacna1bO55017 Gm43848-201ENSMUST00000198060 1247 ntBASIC2.11□□□□□ -2.07
Cacna1bO55017 Gm43893-201ENSMUST00000203362 437 ntTSL 3 BASIC2.11□□□□□ -2.07
Cacna1bO55017 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC2.11□□□□□ -2.07
Cacna1bO55017 Gm4263-202ENSMUST00000221392 667 ntBASIC2.11□□□□□ -2.07
Cacna1bO55017 Gm24207-201ENSMUST00000082781 108 ntBASIC2.11□□□□□ -2.07
Cacna1bO55017 Gm6207-201ENSMUST00000120075 1386 ntBASIC2.11□□□□□ -2.07
Cacna1bO55017 Gm6228-201ENSMUST00000178856 1386 ntBASIC2.11□□□□□ -2.07
Cacna1bO55017 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
Cacna1bO55017 Gm42818-201ENSMUST00000198869 987 ntBASIC2.1□□□□□ -2.07
Cacna1bO55017 Zmym2-202ENSMUST00000223669 1281 ntBASIC2.1□□□□□ -2.07
Cacna1bO55017 Cd226-202ENSMUST00000097496 911 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Cacna1bO55017 Skint11-204ENSMUST00000164297 1393 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
Cacna1bO55017 Gm15975-201ENSMUST00000122385 1402 ntBASIC2.1□□□□□ -2.07
Cacna1bO55017 Olfr203-202ENSMUST00000215893 1521 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Cacna1bO55017 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC2.1□□□□□ -2.07
Cacna1bO55017 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
Cacna1bO55017 Gm7421-201ENSMUST00000119298 639 ntBASIC2.09□□□□□ -2.07
Cacna1bO55017 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Cacna1bO55017 Gm7365-201ENSMUST00000120877 639 ntBASIC2.09□□□□□ -2.07
Cacna1bO55017 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
Cacna1bO55017 Gm24771-201ENSMUST00000158508 137 ntBASIC2.09□□□□□ -2.07
Cacna1bO55017 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC2.09□□□□□ -2.07
Cacna1bO55017 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
Cacna1bO55017 Gm24261-201ENSMUST00000083744 104 ntBASIC2.09□□□□□ -2.07
Cacna1bO55017 Gm25099-201ENSMUST00000093716 116 ntBASIC2.09□□□□□ -2.07
Cacna1bO55017 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Cacna1bO55017 Gm37515-201ENSMUST00000193321 3817 ntBASIC2.09□□□□□ -2.07
Cacna1bO55017 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Cacna1bO55017 Gm24096-201ENSMUST00000103905 110 ntBASIC2.09□□□□□ -2.07
Cacna1bO55017 Gm25496-201ENSMUST00000104430 120 ntBASIC2.09□□□□□ -2.07
Cacna1bO55017 Gm12205-201ENSMUST00000133940 575 ntTSL 5 BASIC2.09□□□□□ -2.07
Cacna1bO55017 Gm23229-201ENSMUST00000157297 105 ntBASIC2.09□□□□□ -2.07
Cacna1bO55017 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
Cacna1bO55017 Gm27796-201ENSMUST00000183863 261 ntBASIC2.09□□□□□ -2.07
Cacna1bO55017 Gm28974-201ENSMUST00000187893 231 ntBASIC2.09□□□□□ -2.07
Cacna1bO55017 Gm28724-202ENSMUST00000194218 295 ntBASIC2.09□□□□□ -2.07
Cacna1bO55017 Gm19057-201ENSMUST00000194329 1197 ntBASIC2.09□□□□□ -2.07
Cacna1bO55017 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC2.09□□□□□ -2.07
Cacna1bO55017 AC105407.3-201ENSMUST00000224161 648 ntBASIC2.09□□□□□ -2.07
Cacna1bO55017 Olfr971-201ENSMUST00000075467 924 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Cacna1bO55017 Olfr469-201ENSMUST00000075704 945 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Cacna1bO55017 Gm42659-201ENSMUST00000196955 1754 ntBASIC2.09□□□□□ -2.08
Cacna1bO55017 Gm22469-201ENSMUST00000104118 133 ntBASIC2.08□□□□□ -2.08
Cacna1bO55017 Rpl27-ps2-201ENSMUST00000120378 399 ntBASIC2.08□□□□□ -2.08
Cacna1bO55017 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC2.08□□□□□ -2.08
Cacna1bO55017 Gm24010-201ENSMUST00000157731 282 ntBASIC2.08□□□□□ -2.08
Cacna1bO55017 Gm28975-201ENSMUST00000186412 686 ntBASIC2.08□□□□□ -2.08
Cacna1bO55017 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC2.08□□□□□ -2.08
Cacna1bO55017 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC2.08□□□□□ -2.08
Cacna1bO55017 Mir3073b-201ENSMUST00000199383 60 ntBASIC2.08□□□□□ -2.08
Cacna1bO55017 Gm45272-202ENSMUST00000209875 502 ntTSL 3 BASIC2.08□□□□□ -2.08
Cacna1bO55017 AC124399.1-201ENSMUST00000218334 590 ntBASIC2.08□□□□□ -2.08
Cacna1bO55017 AC147615.1-201ENSMUST00000218914 441 ntBASIC2.08□□□□□ -2.08
Cacna1bO55017 Gm17890-201ENSMUST00000221419 757 ntBASIC2.08□□□□□ -2.08
Cacna1bO55017 Gm9958-201ENSMUST00000068250 1284 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Cacna1bO55017 Olfr190-201ENSMUST00000071243 924 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Cacna1bO55017 Gm45033-201ENSMUST00000206710 3167 ntBASIC2.08□□□□□ -2.08
Cacna1bO55017 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
Cacna1bO55017 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Cacna1bO55017 Gm15159-201ENSMUST00000117062 764 ntBASIC2.08□□□□□ -2.08
Cacna1bO55017 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC2.08□□□□□ -2.08
Cacna1bO55017 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC2.08□□□□□ -2.08
Cacna1bO55017 Gm24561-201ENSMUST00000175182 95 ntBASIC2.08□□□□□ -2.08
Cacna1bO55017 Gm22254-201ENSMUST00000179186 110 ntBASIC2.08□□□□□ -2.08
Cacna1bO55017 Gm27668-201ENSMUST00000184188 120 ntBASIC2.08□□□□□ -2.08
Cacna1bO55017 Gm29475-201ENSMUST00000190767 312 ntBASIC2.08□□□□□ -2.08
Cacna1bO55017 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC2.08□□□□□ -2.08
Cacna1bO55017 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC2.08□□□□□ -2.08
Cacna1bO55017 Gm5655-201ENSMUST00000221078 901 ntBASIC2.08□□□□□ -2.08
Cacna1bO55017 CT030662.1-201ENSMUST00000227380 232 ntBASIC2.08□□□□□ -2.08
Cacna1bO55017 Olfr1049-201ENSMUST00000099899 953 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Cacna1bO55017 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Cacna1bO55017 Tmem167-201ENSMUST00000012566 1541 ntTSL 5 BASIC2.08□□□□□ -2.08
Cacna1bO55017 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.08□□□□□ -2.08
Cacna1bO55017 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
Cacna1bO55017 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Cacna1bO55017 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC2.07□□□□□ -2.08
Cacna1bO55017 Gm26238-201ENSMUST00000175538 117 ntBASIC2.07□□□□□ -2.08
Cacna1bO55017 Gm19269-201ENSMUST00000211401 804 ntBASIC2.07□□□□□ -2.08
Cacna1bO55017 3110043J17Rik-201ENSMUST00000219153 760 ntBASIC2.07□□□□□ -2.08
Cacna1bO55017 CT009754.4-201ENSMUST00000221430 565 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms