Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm38071-201ENSMUST00000195792 3378 ntBASIC2.26□□□□□ -2.05
Col6a3E9PWQ3 AC158979.1-201ENSMUST00000223594 2252 ntBASIC2.26□□□□□ -2.05
Col6a3E9PWQ3 Gm7039-201ENSMUST00000205138 346 ntBASIC2.26□□□□□ -2.05
Col6a3E9PWQ3 Gm22864-201ENSMUST00000083950 130 ntBASIC2.26□□□□□ -2.05
Col6a3E9PWQ3 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Col6a3E9PWQ3 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC2.26□□□□□ -2.05
Col6a3E9PWQ3 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC2.26□□□□□ -2.05
Col6a3E9PWQ3 Gm12788-201ENSMUST00000119090 308 ntBASIC2.25□□□□□ -2.05
Col6a3E9PWQ3 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC2.25□□□□□ -2.05
Col6a3E9PWQ3 Gm22316-201ENSMUST00000158012 216 ntBASIC2.25□□□□□ -2.05
Col6a3E9PWQ3 Olfr758-ps1-201ENSMUST00000173901 841 ntBASIC2.25□□□□□ -2.05
Col6a3E9PWQ3 Mir7059-201ENSMUST00000184825 59 ntBASIC2.25□□□□□ -2.05
Col6a3E9PWQ3 1700057G04Rik-206ENSMUST00000185580 842 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
Col6a3E9PWQ3 Olfr911-ps1-201ENSMUST00000074987 940 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Col6a3E9PWQ3 Cmah-206ENSMUST00000167746 9727 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
Col6a3E9PWQ3 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
Col6a3E9PWQ3 Mir301b-201ENSMUST00000102333 97 ntBASIC2.25□□□□□ -2.05
Col6a3E9PWQ3 Gm25787-201ENSMUST00000104709 92 ntBASIC2.25□□□□□ -2.05
Col6a3E9PWQ3 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC2.25□□□□□ -2.05
Col6a3E9PWQ3 Gm7437-201ENSMUST00000156744 661 ntTSL 2 BASIC2.25□□□□□ -2.05
Col6a3E9PWQ3 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC2.25□□□□□ -2.05
Col6a3E9PWQ3 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Col6a3E9PWQ3 Gm3055-201ENSMUST00000105316 720 ntTSL 5 BASIC2.25□□□□□ -2.05
Col6a3E9PWQ3 Scarna3b-201ENSMUST00000157533 139 ntBASIC2.25□□□□□ -2.05
Col6a3E9PWQ3 Gm25831-201ENSMUST00000158924 163 ntBASIC2.25□□□□□ -2.05
Col6a3E9PWQ3 Mir6240-201ENSMUST00000184281 117 ntBASIC2.25□□□□□ -2.05
Col6a3E9PWQ3 Olfr855-201ENSMUST00000061693 992 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Col6a3E9PWQ3 Gm9314-201ENSMUST00000199881 1528 ntBASIC2.25□□□□□ -2.05
Col6a3E9PWQ3 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
Col6a3E9PWQ3 Gm38278-201ENSMUST00000194715 1365 ntBASIC2.25□□□□□ -2.05
Col6a3E9PWQ3 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Col6a3E9PWQ3 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Col6a3E9PWQ3 Gm24273-201ENSMUST00000102332 164 ntBASIC2.24□□□□□ -2.05
Col6a3E9PWQ3 Gm26345-201ENSMUST00000157534 120 ntBASIC2.24□□□□□ -2.05
Col6a3E9PWQ3 Gm16111-201ENSMUST00000162128 285 ntBASIC2.24□□□□□ -2.05
Col6a3E9PWQ3 Gm27315-201ENSMUST00000183977 154 ntBASIC2.24□□□□□ -2.05
Col6a3E9PWQ3 Gm37837-201ENSMUST00000191743 604 ntBASIC2.24□□□□□ -2.05
Col6a3E9PWQ3 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC2.24□□□□□ -2.05
Col6a3E9PWQ3 CT009696.2-201ENSMUST00000216668 432 ntBASIC2.24□□□□□ -2.05
Col6a3E9PWQ3 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Col6a3E9PWQ3 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Col6a3E9PWQ3 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC2.24□□□□□ -2.05
Col6a3E9PWQ3 Gm38311-201ENSMUST00000192945 165 ntBASIC2.24□□□□□ -2.05
Col6a3E9PWQ3 Gm44060-201ENSMUST00000204440 410 ntBASIC2.24□□□□□ -2.05
Col6a3E9PWQ3 Olfr844-201ENSMUST00000054106 930 ntBASIC2.24□□□□□ -2.05
Col6a3E9PWQ3 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
Col6a3E9PWQ3 Gm6913-201ENSMUST00000100019 348 ntBASIC2.23□□□□□ -2.05
Col6a3E9PWQ3 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC2.23□□□□□ -2.05
Col6a3E9PWQ3 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC2.23□□□□□ -2.05
Col6a3E9PWQ3 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
Col6a3E9PWQ3 Gm15760-201ENSMUST00000119553 283 ntBASIC2.23□□□□□ -2.05
Col6a3E9PWQ3 Gm16232-201ENSMUST00000162856 167 ntBASIC2.23□□□□□ -2.05
Col6a3E9PWQ3 Gm42484-201ENSMUST00000196075 2104 ntBASIC2.23□□□□□ -2.05
Col6a3E9PWQ3 Gm44703-201ENSMUST00000205724 248 ntBASIC2.23□□□□□ -2.05
Col6a3E9PWQ3 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
Col6a3E9PWQ3 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Col6a3E9PWQ3 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC2.23□□□□□ -2.05
Col6a3E9PWQ3 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.23□□□□□ -2.05
Col6a3E9PWQ3 Gm38211-201ENSMUST00000192814 7217 ntBASIC2.23□□□□□ -2.05
Col6a3E9PWQ3 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC2.23□□□□□ -2.05
Col6a3E9PWQ3 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC2.23□□□□□ -2.05
Col6a3E9PWQ3 Mup-ps9-201ENSMUST00000178847 545 ntBASIC2.23□□□□□ -2.05
Col6a3E9PWQ3 Gm44376-201ENSMUST00000197570 128 ntBASIC2.23□□□□□ -2.05
Col6a3E9PWQ3 Gm22806-201ENSMUST00000082738 136 ntBASIC2.23□□□□□ -2.05
Col6a3E9PWQ3 Gm18359-201ENSMUST00000173024 1459 ntBASIC2.22□□□□□ -2.05
Col6a3E9PWQ3 Gm12739-201ENSMUST00000119769 382 ntBASIC2.22□□□□□ -2.05
Col6a3E9PWQ3 AC129308.2-201ENSMUST00000224588 789 ntBASIC2.22□□□□□ -2.05
Col6a3E9PWQ3 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Col6a3E9PWQ3 Gm21033-201ENSMUST00000208590 2608 ntBASIC2.22□□□□□ -2.05
Col6a3E9PWQ3 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Col6a3E9PWQ3 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC2.22□□□□□ -2.05
Col6a3E9PWQ3 Gm16100-201ENSMUST00000120489 231 ntBASIC2.22□□□□□ -2.05
Col6a3E9PWQ3 Gm23599-201ENSMUST00000157261 251 ntBASIC2.22□□□□□ -2.05
Col6a3E9PWQ3 Mir5128-201ENSMUST00000175217 84 ntBASIC2.22□□□□□ -2.05
Col6a3E9PWQ3 Obox4-ps5-201ENSMUST00000196368 397 ntBASIC2.22□□□□□ -2.05
Col6a3E9PWQ3 Obox4-ps4-201ENSMUST00000196934 397 ntBASIC2.22□□□□□ -2.05
Col6a3E9PWQ3 Gm43104-201ENSMUST00000197234 311 ntBASIC2.22□□□□□ -2.05
Col6a3E9PWQ3 Obox4-ps10-201ENSMUST00000199376 504 ntBASIC2.22□□□□□ -2.05
Col6a3E9PWQ3 AC160970.1-201ENSMUST00000219311 475 ntBASIC2.22□□□□□ -2.05
Col6a3E9PWQ3 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Col6a3E9PWQ3 Olfr344-201ENSMUST00000075474 930 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Col6a3E9PWQ3 Gm13409-201ENSMUST00000122072 546 ntBASIC2.22□□□□□ -2.05
Col6a3E9PWQ3 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.22□□□□□ -2.05
Col6a3E9PWQ3 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC2.22□□□□□ -2.05
Col6a3E9PWQ3 Gm25470-201ENSMUST00000175576 111 ntBASIC2.22□□□□□ -2.05
Col6a3E9PWQ3 Gm28614-201ENSMUST00000186483 458 ntBASIC2.22□□□□□ -2.05
Col6a3E9PWQ3 Gm19252-201ENSMUST00000204705 305 ntBASIC2.22□□□□□ -2.05
Col6a3E9PWQ3 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC2.21□□□□□ -2.06
Col6a3E9PWQ3 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
Col6a3E9PWQ3 Gm15225-201ENSMUST00000120449 1017 ntBASIC2.21□□□□□ -2.06
Col6a3E9PWQ3 Gm43393-201ENSMUST00000200147 194 ntBASIC2.21□□□□□ -2.06
Col6a3E9PWQ3 Gm43596-201ENSMUST00000202818 884 ntBASIC2.21□□□□□ -2.06
Col6a3E9PWQ3 AC109172.2-201ENSMUST00000228792 381 ntBASIC2.21□□□□□ -2.06
Col6a3E9PWQ3 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Col6a3E9PWQ3 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.21□□□□□ -2.06
Col6a3E9PWQ3 Gm24098-201ENSMUST00000102075 109 ntBASIC2.21□□□□□ -2.06
Col6a3E9PWQ3 Gm25381-201ENSMUST00000102078 109 ntBASIC2.21□□□□□ -2.06
Col6a3E9PWQ3 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC2.21□□□□□ -2.06
Col6a3E9PWQ3 Gm22159-201ENSMUST00000158412 130 ntBASIC2.21□□□□□ -2.06
Col6a3E9PWQ3 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC2.21□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms