Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trav9-4A0A0B4J1K2 Olfr136-201ENSMUST00000077203 939 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Trav9-4A0A0B4J1K2 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trav9-4A0A0B4J1K2 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Trav9-4A0A0B4J1K2 Gm37063-201ENSMUST00000194678 3520 ntBASIC1.84□□□□□ -2.11
Trav9-4A0A0B4J1K2 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
Trav9-4A0A0B4J1K2 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.11
Trav9-4A0A0B4J1K2 Gm13329-201ENSMUST00000117063 265 ntBASIC1.84□□□□□ -2.11
Trav9-4A0A0B4J1K2 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC1.84□□□□□ -2.11
Trav9-4A0A0B4J1K2 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
Trav9-4A0A0B4J1K2 Gm16017-201ENSMUST00000119834 208 ntBASIC1.84□□□□□ -2.11
Trav9-4A0A0B4J1K2 Gm15986-201ENSMUST00000122153 400 ntBASIC1.84□□□□□ -2.11
Trav9-4A0A0B4J1K2 Gm25945-201ENSMUST00000122484 135 ntBASIC1.84□□□□□ -2.11
Trav9-4A0A0B4J1K2 Gm24771-201ENSMUST00000158508 137 ntBASIC1.84□□□□□ -2.11
Trav9-4A0A0B4J1K2 Gm26214-201ENSMUST00000158581 107 ntBASIC1.84□□□□□ -2.11
Trav9-4A0A0B4J1K2 Igkv2-95-2-201ENSMUST00000166362 222 ntBASIC1.84□□□□□ -2.11
Trav9-4A0A0B4J1K2 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Trav9-4A0A0B4J1K2 Gm7634-201ENSMUST00000185778 553 ntBASIC1.84□□□□□ -2.11
Trav9-4A0A0B4J1K2 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Trav9-4A0A0B4J1K2 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC1.84□□□□□ -2.11
Trav9-4A0A0B4J1K2 Gm42578-201ENSMUST00000199960 194 ntBASIC1.84□□□□□ -2.11
Trav9-4A0A0B4J1K2 Gm44348-201ENSMUST00000200165 122 ntBASIC1.84□□□□□ -2.11
Trav9-4A0A0B4J1K2 Gm44161-201ENSMUST00000203532 253 ntBASIC1.84□□□□□ -2.11
Trav9-4A0A0B4J1K2 Gm43991-201ENSMUST00000203751 274 ntBASIC1.84□□□□□ -2.11
Trav9-4A0A0B4J1K2 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC1.84□□□□□ -2.11
Trav9-4A0A0B4J1K2 Gm18892-201ENSMUST00000217628 881 ntBASIC1.84□□□□□ -2.11
Trav9-4A0A0B4J1K2 CT030135.1-201ENSMUST00000223760 570 ntBASIC1.84□□□□□ -2.11
Trav9-4A0A0B4J1K2 AC125350.4-201ENSMUST00000225895 273 ntBASIC1.84□□□□□ -2.11
Trav9-4A0A0B4J1K2 AC090496.1-201ENSMUST00000226020 260 ntBASIC1.84□□□□□ -2.11
Trav9-4A0A0B4J1K2 AC147545.1-201ENSMUST00000227528 108 ntBASIC1.84□□□□□ -2.11
Trav9-4A0A0B4J1K2 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Trav9-4A0A0B4J1K2 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Trav9-4A0A0B4J1K2 Gm26064-201ENSMUST00000083381 109 ntBASIC1.84□□□□□ -2.11
Trav9-4A0A0B4J1K2 Gm9218-201ENSMUST00000121068 2694 ntBASIC1.84□□□□□ -2.11
Trav9-4A0A0B4J1K2 AC154552.6-201ENSMUST00000221365 1342 ntBASIC1.84□□□□□ -2.12
Trav9-4A0A0B4J1K2 Gm6215-201ENSMUST00000119297 1386 ntBASIC1.84□□□□□ -2.12
Trav9-4A0A0B4J1K2 Gm43718-201ENSMUST00000197524 1857 ntBASIC1.84□□□□□ -2.12
Trav9-4A0A0B4J1K2 Gm43326-201ENSMUST00000198459 1638 ntBASIC1.84□□□□□ -2.12
Trav9-4A0A0B4J1K2 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
Trav9-4A0A0B4J1K2 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
Trav9-4A0A0B4J1K2 Gm43047-201ENSMUST00000200089 3460 ntBASIC1.83□□□□□ -2.12
Trav9-4A0A0B4J1K2 Gm37566-201ENSMUST00000192363 4355 ntBASIC1.83□□□□□ -2.12
Trav9-4A0A0B4J1K2 Mir878-201ENSMUST00000104680 78 ntBASIC1.83□□□□□ -2.12
Trav9-4A0A0B4J1K2 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Trav9-4A0A0B4J1K2 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Trav9-4A0A0B4J1K2 Gm26473-201ENSMUST00000116763 127 ntBASIC1.83□□□□□ -2.12
Trav9-4A0A0B4J1K2 Gm14163-201ENSMUST00000117342 217 ntBASIC1.83□□□□□ -2.12
Trav9-4A0A0B4J1K2 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC1.83□□□□□ -2.12
Trav9-4A0A0B4J1K2 Gm11356-201ENSMUST00000118974 192 ntBASIC1.83□□□□□ -2.12
Trav9-4A0A0B4J1K2 Gm12587-201ENSMUST00000120180 427 ntBASIC1.83□□□□□ -2.12
Trav9-4A0A0B4J1K2 Gm13581-201ENSMUST00000120675 278 ntBASIC1.83□□□□□ -2.12
Trav9-4A0A0B4J1K2 Gm15116-201ENSMUST00000122248 663 ntBASIC1.83□□□□□ -2.12
Trav9-4A0A0B4J1K2 Gm14333-201ENSMUST00000130484 264 ntBASIC1.83□□□□□ -2.12
Trav9-4A0A0B4J1K2 Gm13901-201ENSMUST00000137252 468 ntBASIC1.83□□□□□ -2.12
Trav9-4A0A0B4J1K2 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC1.83□□□□□ -2.12
Trav9-4A0A0B4J1K2 Gm17065-201ENSMUST00000165245 239 ntBASIC1.83□□□□□ -2.12
Trav9-4A0A0B4J1K2 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
Trav9-4A0A0B4J1K2 Gm23053-201ENSMUST00000175136 96 ntBASIC1.83□□□□□ -2.12
Trav9-4A0A0B4J1K2 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
Trav9-4A0A0B4J1K2 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC1.83□□□□□ -2.12
Trav9-4A0A0B4J1K2 Vmn1r227-202ENSMUST00000179914 1026 ntBASIC1.83□□□□□ -2.12
Trav9-4A0A0B4J1K2 Gm3852-201ENSMUST00000182781 264 ntBASIC1.83□□□□□ -2.12
Trav9-4A0A0B4J1K2 Olfr576-202ENSMUST00000185326 927 ntTSL 5 BASIC1.83□□□□□ -2.12
Trav9-4A0A0B4J1K2 Gm29553-201ENSMUST00000189692 279 ntBASIC1.83□□□□□ -2.12
Trav9-4A0A0B4J1K2 Gm37353-201ENSMUST00000194497 313 ntBASIC1.83□□□□□ -2.12
Trav9-4A0A0B4J1K2 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC1.83□□□□□ -2.12
Trav9-4A0A0B4J1K2 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC1.83□□□□□ -2.12
Trav9-4A0A0B4J1K2 AC164100.1-201ENSMUST00000227214 508 ntBASIC1.83□□□□□ -2.12
Trav9-4A0A0B4J1K2 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Trav9-4A0A0B4J1K2 Olfr805-201ENSMUST00000078876 960 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Trav9-4A0A0B4J1K2 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Trav9-4A0A0B4J1K2 AC125223.3-201ENSMUST00000223588 2067 ntBASIC1.82□□□□□ -2.12
Trav9-4A0A0B4J1K2 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC1.82□□□□□ -2.12
Trav9-4A0A0B4J1K2 Gm37928-201ENSMUST00000193265 4131 ntBASIC1.82□□□□□ -2.12
Trav9-4A0A0B4J1K2 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Trav9-4A0A0B4J1K2 Gm15108-201ENSMUST00000116160 803 ntBASIC1.82□□□□□ -2.12
Trav9-4A0A0B4J1K2 Gm13502-201ENSMUST00000121574 684 ntBASIC1.82□□□□□ -2.12
Trav9-4A0A0B4J1K2 Gm15111-201ENSMUST00000122142 878 ntBASIC1.82□□□□□ -2.12
Trav9-4A0A0B4J1K2 Gm13487-201ENSMUST00000122240 864 ntBASIC1.82□□□□□ -2.12
Trav9-4A0A0B4J1K2 Gm15762-201ENSMUST00000126447 333 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
Trav9-4A0A0B4J1K2 Gm23223-201ENSMUST00000158119 127 ntBASIC1.82□□□□□ -2.12
Trav9-4A0A0B4J1K2 Gm25866-201ENSMUST00000158245 112 ntBASIC1.82□□□□□ -2.12
Trav9-4A0A0B4J1K2 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC1.82□□□□□ -2.12
Trav9-4A0A0B4J1K2 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC1.82□□□□□ -2.12
Trav9-4A0A0B4J1K2 Gm38214-201ENSMUST00000192581 988 ntBASIC1.82□□□□□ -2.12
Trav9-4A0A0B4J1K2 Gm37479-201ENSMUST00000194169 3841 ntBASIC1.82□□□□□ -2.12
Trav9-4A0A0B4J1K2 Crs-ps-201ENSMUST00000203723 760 ntBASIC1.82□□□□□ -2.12
Trav9-4A0A0B4J1K2 Gm44060-201ENSMUST00000204440 410 ntBASIC1.82□□□□□ -2.12
Trav9-4A0A0B4J1K2 Gm45551-201ENSMUST00000211459 928 ntBASIC1.82□□□□□ -2.12
Trav9-4A0A0B4J1K2 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Trav9-4A0A0B4J1K2 Gm10343-201ENSMUST00000096279 348 ntBASIC1.82□□□□□ -2.12
Trav9-4A0A0B4J1K2 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
Trav9-4A0A0B4J1K2 Gm43092-201ENSMUST00000202986 1854 ntBASIC1.82□□□□□ -2.12
Trav9-4A0A0B4J1K2 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
Trav9-4A0A0B4J1K2 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
Trav9-4A0A0B4J1K2 AC153526.2-201ENSMUST00000218206 2031 ntBASIC1.81□□□□□ -2.12
Trav9-4A0A0B4J1K2 Gm7739-201ENSMUST00000221131 1560 ntBASIC1.81□□□□□ -2.12
Trav9-4A0A0B4J1K2 Gm24715-201ENSMUST00000102377 95 ntBASIC1.81□□□□□ -2.12
Trav9-4A0A0B4J1K2 Snora36b-201ENSMUST00000104383 132 ntBASIC1.81□□□□□ -2.12
Trav9-4A0A0B4J1K2 Gm2066-201ENSMUST00000118046 389 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 103.9 ms