Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Trav16d-dv11A0A075B617 Gm6801-201ENSMUST00000190697 339 ntBASIC2.16□□□□□ -2.06
Trav16d-dv11A0A075B617 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Trav16d-dv11A0A075B617 Gm43521-201ENSMUST00000197838 255 ntBASIC2.16□□□□□ -2.06
Trav16d-dv11A0A075B617 Gm43107-201ENSMUST00000198729 255 ntBASIC2.16□□□□□ -2.06
Trav16d-dv11A0A075B617 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC2.16□□□□□ -2.06
Trav16d-dv11A0A075B617 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Trav16d-dv11A0A075B617 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC2.16□□□□□ -2.06
Trav16d-dv11A0A075B617 Gm18100-201ENSMUST00000200897 452 ntBASIC2.16□□□□□ -2.06
Trav16d-dv11A0A075B617 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC2.16□□□□□ -2.06
Trav16d-dv11A0A075B617 Olfr1542-ps1-201ENSMUST00000204175 752 ntBASIC2.16□□□□□ -2.06
Trav16d-dv11A0A075B617 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC2.16□□□□□ -2.06
Trav16d-dv11A0A075B617 Gm18410-201ENSMUST00000207199 577 ntBASIC2.16□□□□□ -2.06
Trav16d-dv11A0A075B617 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC2.16□□□□□ -2.06
Trav16d-dv11A0A075B617 Gm7422-201ENSMUST00000220115 640 ntBASIC2.16□□□□□ -2.06
Trav16d-dv11A0A075B617 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Trav16d-dv11A0A075B617 Platr25-208ENSMUST00000222602 939 ntBASIC2.16□□□□□ -2.06
Trav16d-dv11A0A075B617 Gm18026-201ENSMUST00000222789 727 ntBASIC2.16□□□□□ -2.06
Trav16d-dv11A0A075B617 AC116656.1-201ENSMUST00000227040 755 ntBASIC2.16□□□□□ -2.06
Trav16d-dv11A0A075B617 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Trav16d-dv11A0A075B617 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Trav16d-dv11A0A075B617 Olfr1484-201ENSMUST00000074180 948 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Trav16d-dv11A0A075B617 Gm10115-201ENSMUST00000076071 1228 ntBASIC2.16□□□□□ -2.06
Trav16d-dv11A0A075B617 Gm43326-201ENSMUST00000198459 1638 ntBASIC2.16□□□□□ -2.06
Trav16d-dv11A0A075B617 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
Trav16d-dv11A0A075B617 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
Trav16d-dv11A0A075B617 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
Trav16d-dv11A0A075B617 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
Trav16d-dv11A0A075B617 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
Trav16d-dv11A0A075B617 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Trav16d-dv11A0A075B617 Gm26341-201ENSMUST00000104561 134 ntBASIC2.15□□□□□ -2.07
Trav16d-dv11A0A075B617 Gm15018-201ENSMUST00000117090 633 ntBASIC2.15□□□□□ -2.07
Trav16d-dv11A0A075B617 Gm14622-201ENSMUST00000117117 468 ntBASIC2.15□□□□□ -2.07
Trav16d-dv11A0A075B617 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC2.15□□□□□ -2.07
Trav16d-dv11A0A075B617 Gm14103-201ENSMUST00000119075 366 ntBASIC2.15□□□□□ -2.07
Trav16d-dv11A0A075B617 Gm14647-201ENSMUST00000119392 680 ntBASIC2.15□□□□□ -2.07
Trav16d-dv11A0A075B617 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC2.15□□□□□ -2.07
Trav16d-dv11A0A075B617 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC2.15□□□□□ -2.07
Trav16d-dv11A0A075B617 Gm12368-201ENSMUST00000122251 434 ntBASIC2.15□□□□□ -2.07
Trav16d-dv11A0A075B617 n-R5s192-201ENSMUST00000122577 119 ntBASIC2.15□□□□□ -2.07
Trav16d-dv11A0A075B617 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC2.15□□□□□ -2.07
Trav16d-dv11A0A075B617 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC2.15□□□□□ -2.07
Trav16d-dv11A0A075B617 Gm22320-201ENSMUST00000157149 312 ntBASIC2.15□□□□□ -2.07
Trav16d-dv11A0A075B617 Gm24532-201ENSMUST00000157951 286 ntBASIC2.15□□□□□ -2.07
Trav16d-dv11A0A075B617 Mir1947-201ENSMUST00000158235 85 ntBASIC2.15□□□□□ -2.07
Trav16d-dv11A0A075B617 Vmn1r160-201ENSMUST00000171745 924 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Trav16d-dv11A0A075B617 Gm24757-201ENSMUST00000176987 371 ntBASIC2.15□□□□□ -2.07
Trav16d-dv11A0A075B617 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC2.15□□□□□ -2.07
Trav16d-dv11A0A075B617 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC2.15□□□□□ -2.07
Trav16d-dv11A0A075B617 Gm21893-201ENSMUST00000179119 397 ntBASIC2.15□□□□□ -2.07
Trav16d-dv11A0A075B617 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC2.15□□□□□ -2.07
Trav16d-dv11A0A075B617 Mir7020-201ENSMUST00000183787 70 ntBASIC2.15□□□□□ -2.07
Trav16d-dv11A0A075B617 Gm27582-201ENSMUST00000184084 126 ntBASIC2.15□□□□□ -2.07
Trav16d-dv11A0A075B617 Gm27330-201ENSMUST00000184689 132 ntBASIC2.15□□□□□ -2.07
Trav16d-dv11A0A075B617 Gm27608-201ENSMUST00000184822 162 ntBASIC2.15□□□□□ -2.07
Trav16d-dv11A0A075B617 Gm8498-201ENSMUST00000188227 974 ntBASIC2.15□□□□□ -2.07
Trav16d-dv11A0A075B617 Gm8403-201ENSMUST00000189712 1298 ntBASIC2.15□□□□□ -2.07
Trav16d-dv11A0A075B617 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC2.15□□□□□ -2.07
Trav16d-dv11A0A075B617 Gm37097-201ENSMUST00000193676 336 ntBASIC2.15□□□□□ -2.07
Trav16d-dv11A0A075B617 Gm18982-201ENSMUST00000198118 529 ntBASIC2.15□□□□□ -2.07
Trav16d-dv11A0A075B617 Gm42818-201ENSMUST00000198869 987 ntBASIC2.15□□□□□ -2.07
Trav16d-dv11A0A075B617 Gm43746-201ENSMUST00000200028 317 ntBASIC2.15□□□□□ -2.07
Trav16d-dv11A0A075B617 Gm44720-201ENSMUST00000206076 260 ntBASIC2.15□□□□□ -2.07
Trav16d-dv11A0A075B617 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC2.15□□□□□ -2.07
Trav16d-dv11A0A075B617 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC2.15□□□□□ -2.07
Trav16d-dv11A0A075B617 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC2.15□□□□□ -2.07
Trav16d-dv11A0A075B617 AC154552.2-201ENSMUST00000223117 794 ntTSL 5 BASIC2.15□□□□□ -2.07
Trav16d-dv11A0A075B617 AC154594.1-201ENSMUST00000225171 1273 ntBASIC2.15□□□□□ -2.07
Trav16d-dv11A0A075B617 AC166574.3-201ENSMUST00000226725 367 ntBASIC2.15□□□□□ -2.07
Trav16d-dv11A0A075B617 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Trav16d-dv11A0A075B617 Olfr1008-201ENSMUST00000054868 942 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Trav16d-dv11A0A075B617 Gm5265-201ENSMUST00000076828 342 ntBASIC2.15□□□□□ -2.07
Trav16d-dv11A0A075B617 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.07
Trav16d-dv11A0A075B617 Gm25126-201ENSMUST00000083343 102 ntBASIC2.15□□□□□ -2.07
Trav16d-dv11A0A075B617 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.07
Trav16d-dv11A0A075B617 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.07
Trav16d-dv11A0A075B617 Gm42445-201ENSMUST00000196996 2893 ntBASIC2.15□□□□□ -2.07
Trav16d-dv11A0A075B617 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Trav16d-dv11A0A075B617 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
Trav16d-dv11A0A075B617 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Trav16d-dv11A0A075B617 Gm14448-201ENSMUST00000116383 210 ntBASIC2.14□□□□□ -2.07
Trav16d-dv11A0A075B617 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC2.14□□□□□ -2.07
Trav16d-dv11A0A075B617 Gm13087-201ENSMUST00000118298 256 ntBASIC2.14□□□□□ -2.07
Trav16d-dv11A0A075B617 Olfr1117-ps1-201ENSMUST00000118736 984 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Trav16d-dv11A0A075B617 Gm14940-201ENSMUST00000119309 495 ntBASIC2.14□□□□□ -2.07
Trav16d-dv11A0A075B617 Gm15060-201ENSMUST00000119550 948 ntBASIC2.14□□□□□ -2.07
Trav16d-dv11A0A075B617 Gm12095-201ENSMUST00000121962 816 ntBASIC2.14□□□□□ -2.07
Trav16d-dv11A0A075B617 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC2.14□□□□□ -2.07
Trav16d-dv11A0A075B617 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
Trav16d-dv11A0A075B617 Gm24240-201ENSMUST00000157785 135 ntBASIC2.14□□□□□ -2.07
Trav16d-dv11A0A075B617 Gm23409-201ENSMUST00000158516 237 ntBASIC2.14□□□□□ -2.07
Trav16d-dv11A0A075B617 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Trav16d-dv11A0A075B617 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC2.14□□□□□ -2.07
Trav16d-dv11A0A075B617 Gm27599-201ENSMUST00000183758 174 ntBASIC2.14□□□□□ -2.07
Trav16d-dv11A0A075B617 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC2.14□□□□□ -2.07
Trav16d-dv11A0A075B617 Gm28802-201ENSMUST00000188624 944 ntBASIC2.14□□□□□ -2.07
Trav16d-dv11A0A075B617 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC2.14□□□□□ -2.07
Trav16d-dv11A0A075B617 Gm29478-201ENSMUST00000191272 688 ntTSL 3 BASIC2.14□□□□□ -2.07
Trav16d-dv11A0A075B617 Gm19066-201ENSMUST00000193232 1078 ntBASIC2.14□□□□□ -2.07
Trav16d-dv11A0A075B617 Gm37005-201ENSMUST00000193281 1164 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 128.7 ms