Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Gm25560-201ENSMUST00000104606 176 ntBASIC2.94□□□□□ -1.94
Trav1A0A075B5Z4 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC2.94□□□□□ -1.94
Trav1A0A075B5Z4 Gm12102-201ENSMUST00000118251 604 ntBASIC2.94□□□□□ -1.94
Trav1A0A075B5Z4 Gm2318-201ENSMUST00000119623 639 ntBASIC2.94□□□□□ -1.94
Trav1A0A075B5Z4 Gm2768-201ENSMUST00000121062 250 ntBASIC2.94□□□□□ -1.94
Trav1A0A075B5Z4 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC2.94□□□□□ -1.94
Trav1A0A075B5Z4 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Trav1A0A075B5Z4 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC2.94□□□□□ -1.94
Trav1A0A075B5Z4 Gm23781-201ENSMUST00000157940 308 ntBASIC2.94□□□□□ -1.94
Trav1A0A075B5Z4 Gm23312-201ENSMUST00000158774 102 ntBASIC2.94□□□□□ -1.94
Trav1A0A075B5Z4 Gm26061-201ENSMUST00000175584 108 ntBASIC2.94□□□□□ -1.94
Trav1A0A075B5Z4 Gm7438-201ENSMUST00000177664 639 ntBASIC2.94□□□□□ -1.94
Trav1A0A075B5Z4 Gm7408-201ENSMUST00000178014 639 ntBASIC2.94□□□□□ -1.94
Trav1A0A075B5Z4 Gm7386-201ENSMUST00000178020 639 ntBASIC2.94□□□□□ -1.94
Trav1A0A075B5Z4 Gm3657-201ENSMUST00000178170 639 ntBASIC2.94□□□□□ -1.94
Trav1A0A075B5Z4 Gm7415-201ENSMUST00000178205 639 ntBASIC2.94□□□□□ -1.94
Trav1A0A075B5Z4 Gm7398-201ENSMUST00000178589 639 ntBASIC2.94□□□□□ -1.94
Trav1A0A075B5Z4 Gm7391-201ENSMUST00000178680 639 ntBASIC2.94□□□□□ -1.94
Trav1A0A075B5Z4 Gm7375-201ENSMUST00000179232 639 ntBASIC2.94□□□□□ -1.94
Trav1A0A075B5Z4 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
Trav1A0A075B5Z4 Gm3681-201ENSMUST00000179940 639 ntBASIC2.94□□□□□ -1.94
Trav1A0A075B5Z4 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC2.94□□□□□ -1.94
Trav1A0A075B5Z4 1700027I24Rik-201ENSMUST00000183612 696 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Trav1A0A075B5Z4 Gm28356-202ENSMUST00000187566 858 ntBASIC2.94□□□□□ -1.94
Trav1A0A075B5Z4 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC2.94□□□□□ -1.94
Trav1A0A075B5Z4 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC2.94□□□□□ -1.94
Trav1A0A075B5Z4 Gm44181-201ENSMUST00000203106 483 ntBASIC2.94□□□□□ -1.94
Trav1A0A075B5Z4 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC2.94□□□□□ -1.94
Trav1A0A075B5Z4 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Trav1A0A075B5Z4 AC153541.1-201ENSMUST00000213786 294 ntBASIC2.94□□□□□ -1.94
Trav1A0A075B5Z4 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC2.94□□□□□ -1.94
Trav1A0A075B5Z4 Gm18903-201ENSMUST00000215343 480 ntBASIC2.94□□□□□ -1.94
Trav1A0A075B5Z4 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC2.94□□□□□ -1.94
Trav1A0A075B5Z4 AC102603.1-201ENSMUST00000227481 584 ntBASIC2.94□□□□□ -1.94
Trav1A0A075B5Z4 Olfr1052-201ENSMUST00000054746 940 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Trav1A0A075B5Z4 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
Trav1A0A075B5Z4 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
Trav1A0A075B5Z4 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Trav1A0A075B5Z4 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Trav1A0A075B5Z4 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
Trav1A0A075B5Z4 Gm15302-201ENSMUST00000117779 2630 ntBASIC2.94□□□□□ -1.94
Trav1A0A075B5Z4 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Trav1A0A075B5Z4 Gm11284-201ENSMUST00000121910 1887 ntBASIC2.94□□□□□ -1.94
Trav1A0A075B5Z4 Gm14421-201ENSMUST00000121755 1958 ntBASIC2.94□□□□□ -1.94
Trav1A0A075B5Z4 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Trav1A0A075B5Z4 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC2.94□□□□□ -1.94
Trav1A0A075B5Z4 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
Trav1A0A075B5Z4 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Trav1A0A075B5Z4 CT009510.2-203ENSMUST00000226704 2136 ntBASIC2.93□□□□□ -1.94
Trav1A0A075B5Z4 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Trav1A0A075B5Z4 Gm7957-201ENSMUST00000207404 2602 ntBASIC2.93□□□□□ -1.94
Trav1A0A075B5Z4 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC2.93□□□□□ -1.94
Trav1A0A075B5Z4 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC2.93□□□□□ -1.94
Trav1A0A075B5Z4 Olfr172-202ENSMUST00000214139 1778 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Trav1A0A075B5Z4 Gm14445-201ENSMUST00000117051 1484 ntBASIC2.93□□□□□ -1.94
Trav1A0A075B5Z4 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
Trav1A0A075B5Z4 Mir599-201ENSMUST00000102378 88 ntBASIC2.93□□□□□ -1.94
Trav1A0A075B5Z4 Gm24581-201ENSMUST00000103962 133 ntBASIC2.93□□□□□ -1.94
Trav1A0A075B5Z4 Gm24120-201ENSMUST00000103978 129 ntBASIC2.93□□□□□ -1.94
Trav1A0A075B5Z4 Gm26075-201ENSMUST00000104062 121 ntBASIC2.93□□□□□ -1.94
Trav1A0A075B5Z4 Gm24792-201ENSMUST00000104286 128 ntBASIC2.93□□□□□ -1.94
Trav1A0A075B5Z4 Mir883a-201ENSMUST00000104824 76 ntBASIC2.93□□□□□ -1.94
Trav1A0A075B5Z4 Gm12598-201ENSMUST00000117333 830 ntBASIC2.93□□□□□ -1.94
Trav1A0A075B5Z4 Gm14647-201ENSMUST00000119392 680 ntBASIC2.93□□□□□ -1.94
Trav1A0A075B5Z4 Gm15120-201ENSMUST00000120602 301 ntBASIC2.93□□□□□ -1.94
Trav1A0A075B5Z4 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC2.93□□□□□ -1.94
Trav1A0A075B5Z4 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC2.93□□□□□ -1.94
Trav1A0A075B5Z4 Gm17030-201ENSMUST00000167016 393 ntBASIC2.93□□□□□ -1.94
Trav1A0A075B5Z4 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC2.93□□□□□ -1.94
Trav1A0A075B5Z4 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC2.93□□□□□ -1.94
Trav1A0A075B5Z4 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC2.93□□□□□ -1.94
Trav1A0A075B5Z4 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Trav1A0A075B5Z4 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Trav1A0A075B5Z4 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC2.93□□□□□ -1.94
Trav1A0A075B5Z4 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC2.93□□□□□ -1.94
Trav1A0A075B5Z4 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC2.93□□□□□ -1.94
Trav1A0A075B5Z4 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC2.93□□□□□ -1.94
Trav1A0A075B5Z4 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC2.93□□□□□ -1.94
Trav1A0A075B5Z4 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC2.93□□□□□ -1.94
Trav1A0A075B5Z4 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC2.93□□□□□ -1.94
Trav1A0A075B5Z4 Gm8676-201ENSMUST00000184206 637 ntBASIC2.93□□□□□ -1.94
Trav1A0A075B5Z4 Gm28847-201ENSMUST00000186778 700 ntBASIC2.93□□□□□ -1.94
Trav1A0A075B5Z4 Gm29365-201ENSMUST00000189461 699 ntBASIC2.93□□□□□ -1.94
Trav1A0A075B5Z4 Gm37828-201ENSMUST00000192496 432 ntBASIC2.93□□□□□ -1.94
Trav1A0A075B5Z4 Gm7182-201ENSMUST00000193351 732 ntBASIC2.93□□□□□ -1.94
Trav1A0A075B5Z4 Gm42805-201ENSMUST00000196158 276 ntBASIC2.93□□□□□ -1.94
Trav1A0A075B5Z4 Gm43043-201ENSMUST00000196579 412 ntBASIC2.93□□□□□ -1.94
Trav1A0A075B5Z4 Gm8423-201ENSMUST00000211387 607 ntBASIC2.93□□□□□ -1.94
Trav1A0A075B5Z4 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC2.93□□□□□ -1.94
Trav1A0A075B5Z4 AC153662.1-201ENSMUST00000222220 270 ntBASIC2.93□□□□□ -1.94
Trav1A0A075B5Z4 AC173481.1-201ENSMUST00000223351 270 ntBASIC2.93□□□□□ -1.94
Trav1A0A075B5Z4 AC158521.1-201ENSMUST00000225295 660 ntBASIC2.93□□□□□ -1.94
Trav1A0A075B5Z4 AC161758.1-201ENSMUST00000226123 310 ntBASIC2.93□□□□□ -1.94
Trav1A0A075B5Z4 AC158142.1-201ENSMUST00000226721 416 ntBASIC2.93□□□□□ -1.94
Trav1A0A075B5Z4 AC155237.2-201ENSMUST00000228487 478 ntBASIC2.93□□□□□ -1.94
Trav1A0A075B5Z4 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
Trav1A0A075B5Z4 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Trav1A0A075B5Z4 Olfr1013-201ENSMUST00000065626 918 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Trav1A0A075B5Z4 Olfr1014-201ENSMUST00000076250 918 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Trav1A0A075B5Z4 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 83.6 ms