Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Gm25509-201ENSMUST00000116985 106 ntBASIC3.19□□□□□ -1.9
H2afb1S4R1E0 Gm14537-201ENSMUST00000117464 599 ntBASIC3.19□□□□□ -1.9
H2afb1S4R1E0 Gm15087-201ENSMUST00000117465 1172 ntBASIC3.19□□□□□ -1.9
H2afb1S4R1E0 Gm12509-201ENSMUST00000118033 609 ntBASIC3.19□□□□□ -1.9
H2afb1S4R1E0 Gm11913-201ENSMUST00000119094 336 ntBASIC3.19□□□□□ -1.9
H2afb1S4R1E0 Gm11704-201ENSMUST00000120031 214 ntBASIC3.19□□□□□ -1.9
H2afb1S4R1E0 Gm14815-201ENSMUST00000120060 488 ntBASIC3.19□□□□□ -1.9
H2afb1S4R1E0 Gm2005-201ENSMUST00000120759 542 ntBASIC3.19□□□□□ -1.9
H2afb1S4R1E0 Gm14982-201ENSMUST00000121102 442 ntBASIC3.19□□□□□ -1.9
H2afb1S4R1E0 Gm12858-201ENSMUST00000121913 208 ntBASIC3.19□□□□□ -1.9
H2afb1S4R1E0 Gm22480-201ENSMUST00000122568 128 ntBASIC3.19□□□□□ -1.9
H2afb1S4R1E0 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC3.19□□□□□ -1.9
H2afb1S4R1E0 Mir5127-201ENSMUST00000175295 71 ntBASIC3.19□□□□□ -1.9
H2afb1S4R1E0 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC3.19□□□□□ -1.9
H2afb1S4R1E0 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC3.19□□□□□ -1.9
H2afb1S4R1E0 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC3.19□□□□□ -1.9
H2afb1S4R1E0 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC3.19□□□□□ -1.9
H2afb1S4R1E0 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
H2afb1S4R1E0 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
H2afb1S4R1E0 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
H2afb1S4R1E0 Mir713-201ENSMUST00000178651 108 ntBASIC3.19□□□□□ -1.9
H2afb1S4R1E0 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
H2afb1S4R1E0 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
H2afb1S4R1E0 Gm23648-201ENSMUST00000180301 107 ntBASIC3.19□□□□□ -1.9
H2afb1S4R1E0 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
H2afb1S4R1E0 Gm28474-201ENSMUST00000188501 315 ntBASIC3.19□□□□□ -1.9
H2afb1S4R1E0 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC3.19□□□□□ -1.9
H2afb1S4R1E0 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
H2afb1S4R1E0 Gm18775-201ENSMUST00000190763 586 ntBASIC3.19□□□□□ -1.9
H2afb1S4R1E0 Gm37001-201ENSMUST00000193377 190 ntBASIC3.19□□□□□ -1.9
H2afb1S4R1E0 Gm37791-201ENSMUST00000195081 286 ntBASIC3.19□□□□□ -1.9
H2afb1S4R1E0 Gm18414-201ENSMUST00000210858 694 ntBASIC3.19□□□□□ -1.9
H2afb1S4R1E0 AC145736.1-201ENSMUST00000214661 479 ntBASIC3.19□□□□□ -1.9
H2afb1S4R1E0 AC112274.2-201ENSMUST00000218436 170 ntBASIC3.19□□□□□ -1.9
H2afb1S4R1E0 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC3.19□□□□□ -1.9
H2afb1S4R1E0 AC161758.1-201ENSMUST00000226123 310 ntBASIC3.19□□□□□ -1.9
H2afb1S4R1E0 AC133101.1-201ENSMUST00000226939 1199 ntBASIC3.19□□□□□ -1.9
H2afb1S4R1E0 AC129208.2-201ENSMUST00000228506 320 ntBASIC3.19□□□□□ -1.9
H2afb1S4R1E0 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
H2afb1S4R1E0 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
H2afb1S4R1E0 Gm23506-201ENSMUST00000083077 107 ntBASIC3.19□□□□□ -1.9
H2afb1S4R1E0 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC3.19□□□□□ -1.9
H2afb1S4R1E0 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
H2afb1S4R1E0 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
H2afb1S4R1E0 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
H2afb1S4R1E0 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
H2afb1S4R1E0 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
H2afb1S4R1E0 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
H2afb1S4R1E0 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
H2afb1S4R1E0 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
H2afb1S4R1E0 Gm22493-201ENSMUST00000104494 132 ntBASIC3.18□□□□□ -1.9
H2afb1S4R1E0 Gm23532-201ENSMUST00000104569 112 ntBASIC3.18□□□□□ -1.9
H2afb1S4R1E0 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC3.18□□□□□ -1.9
H2afb1S4R1E0 Gm11253-201ENSMUST00000118486 201 ntBASIC3.18□□□□□ -1.9
H2afb1S4R1E0 Gm14128-201ENSMUST00000119514 1011 ntBASIC3.18□□□□□ -1.9
H2afb1S4R1E0 Gm13574-201ENSMUST00000120482 394 ntBASIC3.18□□□□□ -1.9
H2afb1S4R1E0 Gm11321-201ENSMUST00000121257 902 ntBASIC3.18□□□□□ -1.9
H2afb1S4R1E0 Gm14578-201ENSMUST00000122166 391 ntBASIC3.18□□□□□ -1.9
H2afb1S4R1E0 Gm22204-201ENSMUST00000122654 327 ntBASIC3.18□□□□□ -1.9
H2afb1S4R1E0 Gm23098-201ENSMUST00000157552 299 ntBASIC3.18□□□□□ -1.9
H2afb1S4R1E0 Gm24190-201ENSMUST00000157976 216 ntBASIC3.18□□□□□ -1.9
H2afb1S4R1E0 Gm25605-201ENSMUST00000158364 124 ntBASIC3.18□□□□□ -1.9
H2afb1S4R1E0 Gm25369-201ENSMUST00000158848 132 ntBASIC3.18□□□□□ -1.9
H2afb1S4R1E0 Gm20399-201ENSMUST00000174652 132 ntBASIC3.18□□□□□ -1.9
H2afb1S4R1E0 Gm16430-202ENSMUST00000178145 703 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
H2afb1S4R1E0 Gm16405-202ENSMUST00000180150 703 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
H2afb1S4R1E0 Gm19066-201ENSMUST00000193232 1078 ntBASIC3.18□□□□□ -1.9
H2afb1S4R1E0 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
H2afb1S4R1E0 Gm42828-201ENSMUST00000199669 469 ntBASIC3.18□□□□□ -1.9
H2afb1S4R1E0 Gm43604-201ENSMUST00000199799 705 ntBASIC3.18□□□□□ -1.9
H2afb1S4R1E0 Gm35876-201ENSMUST00000205044 459 ntBASIC3.18□□□□□ -1.9
H2afb1S4R1E0 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC3.18□□□□□ -1.9
H2afb1S4R1E0 Gm46436-201ENSMUST00000221851 1294 ntBASIC3.18□□□□□ -1.9
H2afb1S4R1E0 AC154594.1-201ENSMUST00000225171 1273 ntBASIC3.18□□□□□ -1.9
H2afb1S4R1E0 AC110380.1-201ENSMUST00000226987 389 ntBASIC3.18□□□□□ -1.9
H2afb1S4R1E0 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
H2afb1S4R1E0 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
H2afb1S4R1E0 Gm24622-201ENSMUST00000082619 162 ntBASIC3.18□□□□□ -1.9
H2afb1S4R1E0 Gm25147-201ENSMUST00000083030 105 ntBASIC3.18□□□□□ -1.9
H2afb1S4R1E0 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
H2afb1S4R1E0 Gm5362-201ENSMUST00000211968 3085 ntBASIC3.18□□□□□ -1.9
H2afb1S4R1E0 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
H2afb1S4R1E0 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
H2afb1S4R1E0 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
H2afb1S4R1E0 Gm44625-201ENSMUST00000207838 1561 ntBASIC3.17□□□□□ -1.9
H2afb1S4R1E0 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
H2afb1S4R1E0 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC3.17□□□□□ -1.9
H2afb1S4R1E0 Mir599-201ENSMUST00000102378 88 ntBASIC3.17□□□□□ -1.9
H2afb1S4R1E0 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
H2afb1S4R1E0 Gm12814-201ENSMUST00000117091 846 ntBASIC3.17□□□□□ -1.9
H2afb1S4R1E0 Gm12225-201ENSMUST00000117995 298 ntBASIC3.17□□□□□ -1.9
H2afb1S4R1E0 Gm14753-201ENSMUST00000118503 246 ntBASIC3.17□□□□□ -1.9
H2afb1S4R1E0 Gm14359-201ENSMUST00000118883 424 ntBASIC3.17□□□□□ -1.9
H2afb1S4R1E0 Gm16005-201ENSMUST00000120515 269 ntBASIC3.17□□□□□ -1.9
H2afb1S4R1E0 Gm22613-201ENSMUST00000122679 292 ntBASIC3.17□□□□□ -1.9
H2afb1S4R1E0 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC3.17□□□□□ -1.9
H2afb1S4R1E0 Gm9498-201ENSMUST00000140849 291 ntBASIC3.17□□□□□ -1.9
H2afb1S4R1E0 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC3.17□□□□□ -1.9
H2afb1S4R1E0 Gm23592-201ENSMUST00000157859 117 ntBASIC3.17□□□□□ -1.9
H2afb1S4R1E0 Gm22726-201ENSMUST00000158089 179 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms