Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Gm36934-201ENSMUST00000192007 306 ntBASIC4.04□□□□□ -1.76
Col13a1Q9R1N9 Gm37692-201ENSMUST00000192633 232 ntBASIC4.04□□□□□ -1.76
Col13a1Q9R1N9 Gm36971-201ENSMUST00000195244 378 ntTSL 5 BASIC4.04□□□□□ -1.76
Col13a1Q9R1N9 Igkv12-40-201ENSMUST00000199208 347 ntBASIC4.04□□□□□ -1.76
Col13a1Q9R1N9 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC4.04□□□□□ -1.76
Col13a1Q9R1N9 Gm43440-201ENSMUST00000201957 729 ntBASIC4.04□□□□□ -1.76
Col13a1Q9R1N9 Gm19252-201ENSMUST00000204705 305 ntBASIC4.04□□□□□ -1.76
Col13a1Q9R1N9 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC4.04□□□□□ -1.76
Col13a1Q9R1N9 Gm9309-201ENSMUST00000223537 546 ntBASIC4.04□□□□□ -1.76
Col13a1Q9R1N9 AC164883.9-201ENSMUST00000228042 399 ntBASIC4.04□□□□□ -1.76
Col13a1Q9R1N9 Snord68-201ENSMUST00000082516 86 ntBASIC4.04□□□□□ -1.76
Col13a1Q9R1N9 Gm23679-201ENSMUST00000083161 119 ntBASIC4.04□□□□□ -1.76
Col13a1Q9R1N9 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Col13a1Q9R1N9 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC4.04□□□□□ -1.76
Col13a1Q9R1N9 Synpr-207ENSMUST00000223583 3362 ntBASIC4.04□□□□□ -1.76
Col13a1Q9R1N9 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Col13a1Q9R1N9 CT009510.2-203ENSMUST00000226704 2136 ntBASIC4.04□□□□□ -1.76
Col13a1Q9R1N9 Gm44250-201ENSMUST00000203092 4229 ntBASIC4.04□□□□□ -1.76
Col13a1Q9R1N9 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC4.04□□□□□ -1.76
Col13a1Q9R1N9 Spp1-202ENSMUST00000086833 1411 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
Col13a1Q9R1N9 Fscb-201ENSMUST00000059833 3361 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Col13a1Q9R1N9 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Col13a1Q9R1N9 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Col13a1Q9R1N9 Gm42551-201ENSMUST00000197701 1573 ntBASIC4.03□□□□□ -1.76
Col13a1Q9R1N9 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Col13a1Q9R1N9 AC144772.3-201ENSMUST00000228829 3126 ntBASIC4.03□□□□□ -1.76
Col13a1Q9R1N9 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Col13a1Q9R1N9 Traj2-201ENSMUST00000103738 66 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Col13a1Q9R1N9 Gm24403-201ENSMUST00000104616 130 ntBASIC4.03□□□□□ -1.76
Col13a1Q9R1N9 Gm15603-201ENSMUST00000119252 492 ntBASIC4.03□□□□□ -1.76
Col13a1Q9R1N9 Gm23214-201ENSMUST00000122716 157 ntBASIC4.03□□□□□ -1.76
Col13a1Q9R1N9 Gm25923-201ENSMUST00000158312 138 ntBASIC4.03□□□□□ -1.76
Col13a1Q9R1N9 Gm16213-201ENSMUST00000160076 639 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Col13a1Q9R1N9 Mir6344-201ENSMUST00000183462 104 ntBASIC4.03□□□□□ -1.76
Col13a1Q9R1N9 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC4.03□□□□□ -1.76
Col13a1Q9R1N9 Gm28951-201ENSMUST00000190742 313 ntBASIC4.03□□□□□ -1.76
Col13a1Q9R1N9 Gm37097-201ENSMUST00000193676 336 ntBASIC4.03□□□□□ -1.76
Col13a1Q9R1N9 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC4.03□□□□□ -1.76
Col13a1Q9R1N9 Gm42991-201ENSMUST00000196468 3837 ntBASIC4.03□□□□□ -1.76
Col13a1Q9R1N9 Gm44092-201ENSMUST00000204470 258 ntBASIC4.03□□□□□ -1.76
Col13a1Q9R1N9 Gm5322-201ENSMUST00000206142 699 ntBASIC4.03□□□□□ -1.76
Col13a1Q9R1N9 Gm44521-201ENSMUST00000206469 217 ntBASIC4.03□□□□□ -1.76
Col13a1Q9R1N9 Gm6303-201ENSMUST00000210123 471 ntBASIC4.03□□□□□ -1.76
Col13a1Q9R1N9 Gm2829-201ENSMUST00000213121 499 ntBASIC4.03□□□□□ -1.76
Col13a1Q9R1N9 AC165092.2-201ENSMUST00000224681 368 ntBASIC4.03□□□□□ -1.76
Col13a1Q9R1N9 CT025548.1-201ENSMUST00000227459 257 ntBASIC4.03□□□□□ -1.76
Col13a1Q9R1N9 AC161269.1-201ENSMUST00000228426 318 ntBASIC4.03□□□□□ -1.76
Col13a1Q9R1N9 Gm6462-201ENSMUST00000081488 304 ntBASIC4.03□□□□□ -1.76
Col13a1Q9R1N9 Gm26330-201ENSMUST00000082817 104 ntBASIC4.03□□□□□ -1.76
Col13a1Q9R1N9 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
Col13a1Q9R1N9 Gm6043-201ENSMUST00000099961 492 ntBASIC4.03□□□□□ -1.76
Col13a1Q9R1N9 Gm18360-201ENSMUST00000173327 1524 ntBASIC4.03□□□□□ -1.76
Col13a1Q9R1N9 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Col13a1Q9R1N9 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Col13a1Q9R1N9 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Col13a1Q9R1N9 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
Col13a1Q9R1N9 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Col13a1Q9R1N9 Gm37668-201ENSMUST00000193745 1944 ntBASIC4.03□□□□□ -1.76
Col13a1Q9R1N9 Gm10484-201ENSMUST00000196372 4759 ntBASIC4.03□□□□□ -1.76
Col13a1Q9R1N9 Gm15095-201ENSMUST00000118996 1430 ntBASIC4.03□□□□□ -1.76
Col13a1Q9R1N9 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC4.03□□□□□ -1.77
Col13a1Q9R1N9 Gm43834-201ENSMUST00000197097 4830 ntBASIC4.02□□□□□ -1.77
Col13a1Q9R1N9 Gm38091-201ENSMUST00000192418 3871 ntBASIC4.02□□□□□ -1.77
Col13a1Q9R1N9 Gm42986-201ENSMUST00000201618 3385 ntBASIC4.02□□□□□ -1.77
Col13a1Q9R1N9 AC112274.1-201ENSMUST00000218957 4274 ntBASIC4.02□□□□□ -1.77
Col13a1Q9R1N9 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Col13a1Q9R1N9 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Col13a1Q9R1N9 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Col13a1Q9R1N9 4921501E09Rik-201ENSMUST00000024121 3916 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Col13a1Q9R1N9 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Col13a1Q9R1N9 Gm22831-201ENSMUST00000102473 109 ntBASIC4.02□□□□□ -1.77
Col13a1Q9R1N9 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Col13a1Q9R1N9 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Col13a1Q9R1N9 Gm14880-201ENSMUST00000117581 292 ntBASIC4.02□□□□□ -1.77
Col13a1Q9R1N9 Gm15263-201ENSMUST00000121556 642 ntBASIC4.02□□□□□ -1.77
Col13a1Q9R1N9 Gm23789-201ENSMUST00000122536 301 ntBASIC4.02□□□□□ -1.77
Col13a1Q9R1N9 Olfr406-201ENSMUST00000133561 1101 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Col13a1Q9R1N9 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Col13a1Q9R1N9 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC4.02□□□□□ -1.77
Col13a1Q9R1N9 Gm23542-201ENSMUST00000158208 96 ntBASIC4.02□□□□□ -1.77
Col13a1Q9R1N9 Gm24546-201ENSMUST00000158652 102 ntBASIC4.02□□□□□ -1.77
Col13a1Q9R1N9 Gm3191-201ENSMUST00000167139 346 ntBASIC4.02□□□□□ -1.77
Col13a1Q9R1N9 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Col13a1Q9R1N9 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Col13a1Q9R1N9 Gm21726-201ENSMUST00000179654 392 ntBASIC4.02□□□□□ -1.77
Col13a1Q9R1N9 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Col13a1Q9R1N9 Mir6413-201ENSMUST00000184049 108 ntBASIC4.02□□□□□ -1.77
Col13a1Q9R1N9 Gm28399-201ENSMUST00000186221 318 ntBASIC4.02□□□□□ -1.77
Col13a1Q9R1N9 Gm28572-201ENSMUST00000187444 318 ntBASIC4.02□□□□□ -1.77
Col13a1Q9R1N9 9130024F11Rik-203ENSMUST00000187858 447 ntTSL 2 BASIC4.02□□□□□ -1.77
Col13a1Q9R1N9 Gm29365-201ENSMUST00000189461 699 ntBASIC4.02□□□□□ -1.77
Col13a1Q9R1N9 Gm37701-201ENSMUST00000192947 1100 ntBASIC4.02□□□□□ -1.77
Col13a1Q9R1N9 Gm37416-201ENSMUST00000193596 318 ntBASIC4.02□□□□□ -1.77
Col13a1Q9R1N9 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Col13a1Q9R1N9 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC4.02□□□□□ -1.77
Col13a1Q9R1N9 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC4.02□□□□□ -1.77
Col13a1Q9R1N9 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC4.02□□□□□ -1.77
Col13a1Q9R1N9 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC4.02□□□□□ -1.77
Col13a1Q9R1N9 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Col13a1Q9R1N9 Olfr993-201ENSMUST00000099926 945 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 126.1 ms