Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Scn11aQ9R053 Snord14c-201ENSMUST00000101927 86 ntBASIC2.82□□□□□ -1.96
Scn11aQ9R053 Gm23942-201ENSMUST00000101956 107 ntBASIC2.82□□□□□ -1.96
Scn11aQ9R053 Gm13743-201ENSMUST00000121486 724 ntBASIC2.82□□□□□ -1.96
Scn11aQ9R053 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC2.82□□□□□ -1.96
Scn11aQ9R053 Gm24638-201ENSMUST00000179807 132 ntBASIC2.82□□□□□ -1.96
Scn11aQ9R053 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC2.82□□□□□ -1.96
Scn11aQ9R053 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Scn11aQ9R053 Gm6030-201ENSMUST00000078768 402 ntBASIC2.82□□□□□ -1.96
Scn11aQ9R053 Olfr995-201ENSMUST00000099924 1113 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Scn11aQ9R053 Gm42482-201ENSMUST00000198904 1947 ntBASIC2.82□□□□□ -1.96
Scn11aQ9R053 Gm43373-201ENSMUST00000202552 2870 ntBASIC2.82□□□□□ -1.96
Scn11aQ9R053 Gm25094-201ENSMUST00000103992 131 ntBASIC2.82□□□□□ -1.96
Scn11aQ9R053 Gm23702-201ENSMUST00000158840 130 ntBASIC2.82□□□□□ -1.96
Scn11aQ9R053 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
Scn11aQ9R053 Vmn2r-ps127-201ENSMUST00000175850 1029 ntBASIC2.82□□□□□ -1.96
Scn11aQ9R053 Gm29657-201ENSMUST00000189807 342 ntBASIC2.82□□□□□ -1.96
Scn11aQ9R053 AL928567.1-201ENSMUST00000197891 138 ntBASIC2.82□□□□□ -1.96
Scn11aQ9R053 Gm43587-201ENSMUST00000199590 204 ntBASIC2.82□□□□□ -1.96
Scn11aQ9R053 AC166358.6-201ENSMUST00000221834 1206 ntBASIC2.82□□□□□ -1.96
Scn11aQ9R053 CT009713.4-201ENSMUST00000224246 272 ntBASIC2.82□□□□□ -1.96
Scn11aQ9R053 AC117202.3-201ENSMUST00000228532 310 ntBASIC2.82□□□□□ -1.96
Scn11aQ9R053 Olfr427-201ENSMUST00000080831 948 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Scn11aQ9R053 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Scn11aQ9R053 Gm26077-201ENSMUST00000104064 123 ntBASIC2.81□□□□□ -1.96
Scn11aQ9R053 Gm15421-202ENSMUST00000118224 399 ntBASIC2.81□□□□□ -1.96
Scn11aQ9R053 Gm13228-201ENSMUST00000118937 634 ntBASIC2.81□□□□□ -1.96
Scn11aQ9R053 Gm6806-201ENSMUST00000120092 1006 ntBASIC2.81□□□□□ -1.96
Scn11aQ9R053 Trav20-201ENSMUST00000142754 347 ntBASIC2.81□□□□□ -1.96
Scn11aQ9R053 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC2.81□□□□□ -1.96
Scn11aQ9R053 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Scn11aQ9R053 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Scn11aQ9R053 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Scn11aQ9R053 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Scn11aQ9R053 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Scn11aQ9R053 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Scn11aQ9R053 Gm21489-201ENSMUST00000189668 818 ntBASIC2.81□□□□□ -1.96
Scn11aQ9R053 Gm6615-201ENSMUST00000199426 631 ntBASIC2.81□□□□□ -1.96
Scn11aQ9R053 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC2.81□□□□□ -1.96
Scn11aQ9R053 Gm36247-201ENSMUST00000211834 285 ntBASIC2.81□□□□□ -1.96
Scn11aQ9R053 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC2.81□□□□□ -1.96
Scn11aQ9R053 CT030238.4-201ENSMUST00000228579 801 ntBASIC2.81□□□□□ -1.96
Scn11aQ9R053 Slco6d1-201ENSMUST00000027575 2328 ntAPPRIS P4 TSL 1 (best) BASIC2.81□□□□□ -1.96
Scn11aQ9R053 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Scn11aQ9R053 Mir592-201ENSMUST00000102113 96 ntBASIC2.8□□□□□ -1.96
Scn11aQ9R053 Gm11876-201ENSMUST00000120002 269 ntBASIC2.8□□□□□ -1.96
Scn11aQ9R053 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
Scn11aQ9R053 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
Scn11aQ9R053 Mir8103-201ENSMUST00000183945 107 ntBASIC2.8□□□□□ -1.96
Scn11aQ9R053 Gm29534-201ENSMUST00000187328 382 ntBASIC2.8□□□□□ -1.96
Scn11aQ9R053 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC2.8□□□□□ -1.96
Scn11aQ9R053 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Scn11aQ9R053 Olfr203-201ENSMUST00000089305 924 ntBASIC2.8□□□□□ -1.96
Scn11aQ9R053 Gm37824-201ENSMUST00000193430 3236 ntBASIC2.8□□□□□ -1.96
Scn11aQ9R053 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Scn11aQ9R053 Ctsq-201ENSMUST00000021888 1378 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Scn11aQ9R053 Gm12515-201ENSMUST00000120116 361 ntBASIC2.79□□□□□ -1.96
Scn11aQ9R053 Gm14939-201ENSMUST00000120347 680 ntBASIC2.79□□□□□ -1.96
Scn11aQ9R053 Gm23885-201ENSMUST00000122682 294 ntBASIC2.79□□□□□ -1.96
Scn11aQ9R053 Gm23043-201ENSMUST00000157890 109 ntBASIC2.79□□□□□ -1.96
Scn11aQ9R053 Gm43295-201ENSMUST00000201439 412 ntBASIC2.79□□□□□ -1.96
Scn11aQ9R053 Gm19269-201ENSMUST00000211401 804 ntBASIC2.79□□□□□ -1.96
Scn11aQ9R053 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC2.79□□□□□ -1.96
Scn11aQ9R053 Olfr1499-201ENSMUST00000055672 1052 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Scn11aQ9R053 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Scn11aQ9R053 Gm22806-201ENSMUST00000082738 136 ntBASIC2.79□□□□□ -1.96
Scn11aQ9R053 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Scn11aQ9R053 AC153967.1-201ENSMUST00000219333 3190 ntBASIC2.79□□□□□ -1.96
Scn11aQ9R053 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.79□□□□□ -1.96
Scn11aQ9R053 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Scn11aQ9R053 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
Scn11aQ9R053 Gm15773-201ENSMUST00000118665 1448 ntBASIC2.79□□□□□ -1.96
Scn11aQ9R053 Gm24889-201ENSMUST00000104388 132 ntBASIC2.79□□□□□ -1.96
Scn11aQ9R053 Klra7-204ENSMUST00000112013 1104 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
Scn11aQ9R053 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.79□□□□□ -1.96
Scn11aQ9R053 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
Scn11aQ9R053 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Scn11aQ9R053 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Scn11aQ9R053 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC2.78□□□□□ -1.96
Scn11aQ9R053 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
Scn11aQ9R053 Gm16569-201ENSMUST00000160526 314 ntBASIC2.78□□□□□ -1.96
Scn11aQ9R053 Gm28149-201ENSMUST00000187102 378 ntBASIC2.78□□□□□ -1.96
Scn11aQ9R053 Gm28768-201ENSMUST00000189034 378 ntBASIC2.78□□□□□ -1.96
Scn11aQ9R053 Gm10400-201ENSMUST00000203920 3835 ntBASIC2.78□□□□□ -1.96
Scn11aQ9R053 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC2.78□□□□□ -1.96
Scn11aQ9R053 AC140254.1-201ENSMUST00000220063 331 ntBASIC2.78□□□□□ -1.96
Scn11aQ9R053 CT572983.1-201ENSMUST00000226895 514 ntBASIC2.78□□□□□ -1.96
Scn11aQ9R053 Gm14415-201ENSMUST00000118260 1578 ntBASIC2.78□□□□□ -1.96
Scn11aQ9R053 AC122828.3-201ENSMUST00000223019 3915 ntBASIC2.78□□□□□ -1.96
Scn11aQ9R053 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Scn11aQ9R053 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.77□□□□□ -1.97
Scn11aQ9R053 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC2.77□□□□□ -1.97
Scn11aQ9R053 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC2.77□□□□□ -1.97
Scn11aQ9R053 Olfr990-ps1-201ENSMUST00000120485 904 ntBASIC2.77□□□□□ -1.97
Scn11aQ9R053 Gm15157-201ENSMUST00000121852 702 ntBASIC2.77□□□□□ -1.97
Scn11aQ9R053 n-R5s159-201ENSMUST00000122681 120 ntBASIC2.77□□□□□ -1.97
Scn11aQ9R053 4933430M04Rik-201ENSMUST00000152726 744 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Scn11aQ9R053 Gm25460-201ENSMUST00000157954 127 ntBASIC2.77□□□□□ -1.97
Scn11aQ9R053 Gm16561-201ENSMUST00000163001 192 ntBASIC2.77□□□□□ -1.97
Scn11aQ9R053 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms