Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Gm22345-201ENSMUST00000122644 107 ntBASIC5.98□□□□□ -1.45
Msh5Q9QUM7 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC5.98□□□□□ -1.45
Msh5Q9QUM7 Gm25117-201ENSMUST00000157194 144 ntBASIC5.98□□□□□ -1.45
Msh5Q9QUM7 Gm22967-201ENSMUST00000157956 239 ntBASIC5.98□□□□□ -1.45
Msh5Q9QUM7 Gm23337-201ENSMUST00000158959 118 ntBASIC5.98□□□□□ -1.45
Msh5Q9QUM7 Gm25646-201ENSMUST00000178527 79 ntBASIC5.98□□□□□ -1.45
Msh5Q9QUM7 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Msh5Q9QUM7 Gm29592-201ENSMUST00000189434 370 ntBASIC5.98□□□□□ -1.45
Msh5Q9QUM7 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Msh5Q9QUM7 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC5.98□□□□□ -1.45
Msh5Q9QUM7 1700020D12Rik-201ENSMUST00000221140 426 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Msh5Q9QUM7 n-R5s65-201ENSMUST00000082614 117 ntBASIC5.98□□□□□ -1.45
Msh5Q9QUM7 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC5.98□□□□□ -1.45
Msh5Q9QUM7 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Msh5Q9QUM7 Gm43188-201ENSMUST00000200180 2160 ntBASIC5.98□□□□□ -1.45
Msh5Q9QUM7 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Msh5Q9QUM7 Agbl2-204ENSMUST00000111481 3448 ntAPPRIS P2 TSL 5 BASIC5.98□□□□□ -1.45
Msh5Q9QUM7 Tet2-201ENSMUST00000098603 9179 ntAPPRIS P3 TSL 5 BASIC5.98□□□□□ -1.45
Msh5Q9QUM7 AC154627.2-201ENSMUST00000227028 4669 ntBASIC5.98□□□□□ -1.45
Msh5Q9QUM7 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Msh5Q9QUM7 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Msh5Q9QUM7 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Msh5Q9QUM7 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Msh5Q9QUM7 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Msh5Q9QUM7 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Msh5Q9QUM7 Gm37941-201ENSMUST00000192170 2309 ntBASIC5.98□□□□□ -1.45
Msh5Q9QUM7 Slc10a5-201ENSMUST00000078748 3923 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Msh5Q9QUM7 Gm44209-201ENSMUST00000204556 4153 ntBASIC5.98□□□□□ -1.45
Msh5Q9QUM7 Gm16513-202ENSMUST00000201663 2485 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Msh5Q9QUM7 C230085N15Rik-201ENSMUST00000194893 4327 ntBASIC5.98□□□□□ -1.45
Msh5Q9QUM7 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Msh5Q9QUM7 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Msh5Q9QUM7 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Msh5Q9QUM7 Gm38198-201ENSMUST00000191772 3581 ntBASIC5.97□□□□□ -1.45
Msh5Q9QUM7 Gm38036-201ENSMUST00000194586 3564 ntBASIC5.97□□□□□ -1.45
Msh5Q9QUM7 Cnot7-203ENSMUST00000132032 2542 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Msh5Q9QUM7 Olfr266-202ENSMUST00000213616 2195 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Msh5Q9QUM7 Gm33609-201ENSMUST00000198559 2694 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Msh5Q9QUM7 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Msh5Q9QUM7 CT025686.2-201ENSMUST00000227898 3315 ntBASIC5.97□□□□□ -1.45
Msh5Q9QUM7 Gm12388-201ENSMUST00000119112 1887 ntBASIC5.97□□□□□ -1.45
Msh5Q9QUM7 Olfr1302-203ENSMUST00000215244 2729 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
Msh5Q9QUM7 Apoa2-203ENSMUST00000111320 470 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
Msh5Q9QUM7 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC5.97□□□□□ -1.45
Msh5Q9QUM7 Gm13114-201ENSMUST00000117605 106 ntBASIC5.97□□□□□ -1.45
Msh5Q9QUM7 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC5.97□□□□□ -1.45
Msh5Q9QUM7 Gm12191-201ENSMUST00000118307 348 ntBASIC5.97□□□□□ -1.45
Msh5Q9QUM7 Gm15067-201ENSMUST00000119534 156 ntBASIC5.97□□□□□ -1.45
Msh5Q9QUM7 Gm9703-201ENSMUST00000119573 343 ntBASIC5.97□□□□□ -1.45
Msh5Q9QUM7 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC5.97□□□□□ -1.45
Msh5Q9QUM7 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC5.97□□□□□ -1.45
Msh5Q9QUM7 Gm14551-201ENSMUST00000120802 256 ntBASIC5.97□□□□□ -1.45
Msh5Q9QUM7 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC5.97□□□□□ -1.45
Msh5Q9QUM7 Gm25065-201ENSMUST00000177914 132 ntBASIC5.97□□□□□ -1.45
Msh5Q9QUM7 Gm25891-201ENSMUST00000180050 132 ntBASIC5.97□□□□□ -1.45
Msh5Q9QUM7 Gm43116-201ENSMUST00000199789 195 ntBASIC5.97□□□□□ -1.45
Msh5Q9QUM7 Gm29781-201ENSMUST00000203862 478 ntBASIC5.97□□□□□ -1.45
Msh5Q9QUM7 Gm18405-201ENSMUST00000220743 511 ntBASIC5.97□□□□□ -1.45
Msh5Q9QUM7 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC5.97□□□□□ -1.45
Msh5Q9QUM7 B020031M17Rik-201ENSMUST00000080505 522 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Msh5Q9QUM7 Gm23244-201ENSMUST00000083375 92 ntBASIC5.97□□□□□ -1.45
Msh5Q9QUM7 Gm10343-201ENSMUST00000096279 348 ntBASIC5.97□□□□□ -1.45
Msh5Q9QUM7 Gm14391-201ENSMUST00000099028 473 ntTSL 5 BASIC5.97□□□□□ -1.45
Msh5Q9QUM7 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Msh5Q9QUM7 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Msh5Q9QUM7 Slfn8-202ENSMUST00000092838 3529 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Msh5Q9QUM7 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Msh5Q9QUM7 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Msh5Q9QUM7 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
Msh5Q9QUM7 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
Msh5Q9QUM7 Gm15518-201ENSMUST00000127115 2108 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
Msh5Q9QUM7 Gm43404-201ENSMUST00000200424 2534 ntBASIC5.96□□□□□ -1.45
Msh5Q9QUM7 Sorbs2-231ENSMUST00000171337 5651 ntAPPRIS P4 TSL 1 (best) BASIC5.96□□□□□ -1.45
Msh5Q9QUM7 Slc22a22-201ENSMUST00000022995 2015 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Msh5Q9QUM7 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Msh5Q9QUM7 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC5.96□□□□□ -1.46
Msh5Q9QUM7 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Msh5Q9QUM7 Dynlt1-ps1-201ENSMUST00000117045 342 ntBASIC5.96□□□□□ -1.46
Msh5Q9QUM7 Gm12125-201ENSMUST00000117261 736 ntBASIC5.96□□□□□ -1.46
Msh5Q9QUM7 Gm12099-201ENSMUST00000118660 750 ntBASIC5.96□□□□□ -1.46
Msh5Q9QUM7 Gm23903-201ENSMUST00000157566 131 ntBASIC5.96□□□□□ -1.46
Msh5Q9QUM7 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC5.96□□□□□ -1.46
Msh5Q9QUM7 Gm37065-201ENSMUST00000191636 444 ntTSL 2 BASIC5.96□□□□□ -1.46
Msh5Q9QUM7 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC5.96□□□□□ -1.46
Msh5Q9QUM7 Gm43220-201ENSMUST00000199299 282 ntBASIC5.96□□□□□ -1.46
Msh5Q9QUM7 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC5.96□□□□□ -1.46
Msh5Q9QUM7 Fxyd4-207ENSMUST00000204214 550 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Msh5Q9QUM7 n-R5s50-201ENSMUST00000083168 111 ntBASIC5.96□□□□□ -1.46
Msh5Q9QUM7 Gm25895-201ENSMUST00000083714 100 ntBASIC5.96□□□□□ -1.46
Msh5Q9QUM7 Plcb4-201ENSMUST00000035646 3635 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Msh5Q9QUM7 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Msh5Q9QUM7 Vmn2r3-202ENSMUST00000176328 2748 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
Msh5Q9QUM7 Gm37551-201ENSMUST00000195556 2861 ntBASIC5.96□□□□□ -1.46
Msh5Q9QUM7 AC130827.1-201ENSMUST00000220476 3850 ntBASIC5.96□□□□□ -1.46
Msh5Q9QUM7 Gm43000-201ENSMUST00000198482 3343 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Msh5Q9QUM7 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Msh5Q9QUM7 Vps50-202ENSMUST00000164052 4824 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Msh5Q9QUM7 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Msh5Q9QUM7 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
Msh5Q9QUM7 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 92.8 ms