Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
Trem1Q9JKE2 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC2.85□□□□□ -1.95
Trem1Q9JKE2 Gm6651-201ENSMUST00000189471 271 ntBASIC2.85□□□□□ -1.95
Trem1Q9JKE2 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC2.85□□□□□ -1.95
Trem1Q9JKE2 Gm44137-201ENSMUST00000203670 367 ntBASIC2.85□□□□□ -1.95
Trem1Q9JKE2 Gm44657-201ENSMUST00000208568 450 ntBASIC2.85□□□□□ -1.95
Trem1Q9JKE2 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
Trem1Q9JKE2 AC160972.1-201ENSMUST00000220971 644 ntTSL 2 BASIC2.85□□□□□ -1.95
Trem1Q9JKE2 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC2.85□□□□□ -1.95
Trem1Q9JKE2 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Trem1Q9JKE2 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC2.85□□□□□ -1.95
Trem1Q9JKE2 Scgb1b2-201ENSMUST00000080635 424 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
Trem1Q9JKE2 Gm24871-201ENSMUST00000083099 116 ntBASIC2.85□□□□□ -1.95
Trem1Q9JKE2 Rnu5g-201ENSMUST00000093721 116 ntBASIC2.85□□□□□ -1.95
Trem1Q9JKE2 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC2.85□□□□□ -1.95
Trem1Q9JKE2 Gm43326-201ENSMUST00000198459 1638 ntBASIC2.85□□□□□ -1.95
Trem1Q9JKE2 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
Trem1Q9JKE2 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
Trem1Q9JKE2 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
Trem1Q9JKE2 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC2.84□□□□□ -1.95
Trem1Q9JKE2 Gm12706-201ENSMUST00000121588 698 ntBASIC2.84□□□□□ -1.95
Trem1Q9JKE2 Gm23228-201ENSMUST00000157296 270 ntBASIC2.84□□□□□ -1.95
Trem1Q9JKE2 Gm24736-201ENSMUST00000158862 130 ntBASIC2.84□□□□□ -1.95
Trem1Q9JKE2 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC2.84□□□□□ -1.95
Trem1Q9JKE2 Gm3104-201ENSMUST00000171004 473 ntBASIC2.84□□□□□ -1.95
Trem1Q9JKE2 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
Trem1Q9JKE2 Mir6353-201ENSMUST00000183596 113 ntBASIC2.84□□□□□ -1.95
Trem1Q9JKE2 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC2.84□□□□□ -1.95
Trem1Q9JKE2 Gm28779-201ENSMUST00000189678 323 ntBASIC2.84□□□□□ -1.95
Trem1Q9JKE2 Gm37684-201ENSMUST00000192779 355 ntBASIC2.84□□□□□ -1.95
Trem1Q9JKE2 Gm43070-201ENSMUST00000196938 415 ntBASIC2.84□□□□□ -1.95
Trem1Q9JKE2 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC2.84□□□□□ -1.95
Trem1Q9JKE2 Gm18100-201ENSMUST00000200897 452 ntBASIC2.84□□□□□ -1.95
Trem1Q9JKE2 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC2.84□□□□□ -1.95
Trem1Q9JKE2 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
Trem1Q9JKE2 Slfn5os-202ENSMUST00000216469 550 ntTSL 5 BASIC2.84□□□□□ -1.95
Trem1Q9JKE2 Gm18363-201ENSMUST00000221671 730 ntBASIC2.84□□□□□ -1.95
Trem1Q9JKE2 AC139845.2-201ENSMUST00000227504 436 ntBASIC2.84□□□□□ -1.95
Trem1Q9JKE2 AC130673.2-201ENSMUST00000228091 797 ntBASIC2.84□□□□□ -1.95
Trem1Q9JKE2 Prr32-201ENSMUST00000040002 1110 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
Trem1Q9JKE2 Gm9174-201ENSMUST00000078149 255 ntBASIC2.84□□□□□ -1.95
Trem1Q9JKE2 Gm23297-201ENSMUST00000083184 127 ntBASIC2.84□□□□□ -1.95
Trem1Q9JKE2 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
Trem1Q9JKE2 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
Trem1Q9JKE2 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC2.84□□□□□ -1.96
Trem1Q9JKE2 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Trem1Q9JKE2 AC154511.1-201ENSMUST00000222578 1587 ntBASIC2.83□□□□□ -1.96
Trem1Q9JKE2 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Trem1Q9JKE2 Gm23481-201ENSMUST00000104173 131 ntBASIC2.83□□□□□ -1.96
Trem1Q9JKE2 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Trem1Q9JKE2 Gm22676-201ENSMUST00000116972 129 ntBASIC2.83□□□□□ -1.96
Trem1Q9JKE2 Gm15159-201ENSMUST00000117062 764 ntBASIC2.83□□□□□ -1.96
Trem1Q9JKE2 Gm13454-201ENSMUST00000118166 483 ntBASIC2.83□□□□□ -1.96
Trem1Q9JKE2 Gm7429-201ENSMUST00000118664 348 ntBASIC2.83□□□□□ -1.96
Trem1Q9JKE2 Gm14915-201ENSMUST00000120747 204 ntBASIC2.83□□□□□ -1.96
Trem1Q9JKE2 Gm14982-201ENSMUST00000121102 442 ntBASIC2.83□□□□□ -1.96
Trem1Q9JKE2 Gm12617-201ENSMUST00000121268 381 ntBASIC2.83□□□□□ -1.96
Trem1Q9JKE2 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC2.83□□□□□ -1.96
Trem1Q9JKE2 Gm22320-201ENSMUST00000157149 312 ntBASIC2.83□□□□□ -1.96
Trem1Q9JKE2 Gm22794-201ENSMUST00000157228 306 ntBASIC2.83□□□□□ -1.96
Trem1Q9JKE2 Gm22339-201ENSMUST00000157718 62 ntBASIC2.83□□□□□ -1.96
Trem1Q9JKE2 Mir1947-201ENSMUST00000158235 85 ntBASIC2.83□□□□□ -1.96
Trem1Q9JKE2 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Trem1Q9JKE2 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Trem1Q9JKE2 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC2.83□□□□□ -1.96
Trem1Q9JKE2 1700001F09Rik-201ENSMUST00000178178 884 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Trem1Q9JKE2 Gm7858-201ENSMUST00000190177 622 ntBASIC2.83□□□□□ -1.96
Trem1Q9JKE2 Gm37866-201ENSMUST00000191950 696 ntBASIC2.83□□□□□ -1.96
Trem1Q9JKE2 Gm7142-201ENSMUST00000194232 586 ntBASIC2.83□□□□□ -1.96
Trem1Q9JKE2 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC2.83□□□□□ -1.96
Trem1Q9JKE2 Gm45796-201ENSMUST00000212483 114 ntBASIC2.83□□□□□ -1.96
Trem1Q9JKE2 AC152979.1-201ENSMUST00000218214 289 ntBASIC2.83□□□□□ -1.96
Trem1Q9JKE2 AC157017.2-201ENSMUST00000218354 777 ntBASIC2.83□□□□□ -1.96
Trem1Q9JKE2 CT030159.4-201ENSMUST00000221966 395 ntBASIC2.83□□□□□ -1.96
Trem1Q9JKE2 AC147639.1-201ENSMUST00000224216 661 ntBASIC2.83□□□□□ -1.96
Trem1Q9JKE2 AC241593.1-201ENSMUST00000224768 397 ntBASIC2.83□□□□□ -1.96
Trem1Q9JKE2 AC154506.1-201ENSMUST00000225178 621 ntBASIC2.83□□□□□ -1.96
Trem1Q9JKE2 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Trem1Q9JKE2 Tas2r124-201ENSMUST00000076150 930 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Trem1Q9JKE2 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC2.83□□□□□ -1.96
Trem1Q9JKE2 Gm15975-201ENSMUST00000122385 1402 ntBASIC2.83□□□□□ -1.96
Trem1Q9JKE2 Gm9496-201ENSMUST00000191295 1601 ntBASIC2.82□□□□□ -1.96
Trem1Q9JKE2 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Trem1Q9JKE2 Gm22269-201ENSMUST00000104002 130 ntBASIC2.82□□□□□ -1.96
Trem1Q9JKE2 Amd-ps1-201ENSMUST00000120127 994 ntBASIC2.82□□□□□ -1.96
Trem1Q9JKE2 n-R5s192-201ENSMUST00000122577 119 ntBASIC2.82□□□□□ -1.96
Trem1Q9JKE2 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
Trem1Q9JKE2 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
Trem1Q9JKE2 Gm24532-201ENSMUST00000157951 286 ntBASIC2.82□□□□□ -1.96
Trem1Q9JKE2 Gm25603-201ENSMUST00000158361 105 ntBASIC2.82□□□□□ -1.96
Trem1Q9JKE2 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Trem1Q9JKE2 Gm25534-201ENSMUST00000175365 125 ntBASIC2.82□□□□□ -1.96
Trem1Q9JKE2 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC2.82□□□□□ -1.96
Trem1Q9JKE2 Gm26746-201ENSMUST00000181722 487 ntBASIC2.82□□□□□ -1.96
Trem1Q9JKE2 Gm27869-201ENSMUST00000184327 122 ntBASIC2.82□□□□□ -1.96
Trem1Q9JKE2 Gm27611-201ENSMUST00000184690 108 ntBASIC2.82□□□□□ -1.96
Trem1Q9JKE2 Gm27608-201ENSMUST00000184822 162 ntBASIC2.82□□□□□ -1.96
Trem1Q9JKE2 Gm37343-201ENSMUST00000192542 111 ntBASIC2.82□□□□□ -1.96
Trem1Q9JKE2 AL603834.1-201ENSMUST00000198372 121 ntBASIC2.82□□□□□ -1.96
Trem1Q9JKE2 Gm15235-201ENSMUST00000200572 194 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 86.7 ms